1GOF
NOVEL THIOETHER BOND REVEALED BY A 1.7 ANGSTROMS CRYSTAL STRUCTURE OF GALACTOSE OXIDASE
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1gofa1 | All beta proteins | Immunoglobulin-like beta-sandwich | E set domains | E-set domains of sugar-utilizing enzymes | Galactose oxidase, C-terminal domain | (Hypomyces rosellus ) [TaxId: 5132 ], | SCOPe (2.08) |
A | d1gofa2 | All beta proteins | Galactose-binding domain-like | Galactose-binding domain-like | Galactose-binding domain | Galactose oxidase, N-terminal domain | (Hypomyces rosellus ) [TaxId: 5132 ], | SCOPe (2.08) |
A | d1gofa3 | All beta proteins | 7-bladed beta-propeller | Galactose oxidase, central domain | Galactose oxidase, central domain | Galactose oxidase, central domain | (Hypomyces rosellus ) [TaxId: 5132 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | galactose-binding domain | 8028754 | 4002466 | SCOP2 (2022-06-29) |
A | SCOP2 Family | Galactose oxidase, central domain | 8030465 | 4002725 | SCOP2 (2022-06-29) |
A | SCOP2 Family | E-set domains of sugar-utilizing enzymes | 8054886 | 4007565 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | galactose-binding domain-like | 8041133 | 3000087 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Galactose oxidase, central domain | 8042844 | 3001660 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | E set domains | 8054887 | 3000070 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | F5_F8_type_C_1 | e1gofA1 | A: beta sandwiches | X: jelly-roll | H: Concanavalin A-like | T: Galactose-binding domain-like | F: F5_F8_type_C_1 | ECOD (1.6) |
A | DUF1929 | e1gofA2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: DUF1929 | ECOD (1.6) |
A | Glyoxal_oxid_N | e1gofA3 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: Glyoxal_oxid_N | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.120.260 | Mainly Beta | Sandwich | Jelly Rolls | Galactose-binding domain-like | CATH (4.3.0) |
A | 2.130.10.80 | Mainly Beta | 7 Propeller | Methylamine Dehydrogenase | Chain H | CATH (4.3.0) |
A | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00754 | F5/8 type C domain (F5_F8_type_C) | F5/8 type C domain | This domain is also known as the discoidin (DS) domain family [1]. | Domain | |
PF09118 | Galactose oxidase-like, Early set domain (GO-like_E_set) | Galactose oxidase-like, Early set domain | E or 'early' set domains are associated with the catalytic domain of galactose oxidase at the C-terminal end. Galactose oxidase is an extracellular monomeric enzyme which catalyzes the stereospecific oxidation of a broad range of primary alcohol subs ... | Domain | |
PF01344 | Kelch motif (Kelch_1) | Kelch motif | - | Repeat |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
GALACTOSE OXIDASE | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000421 | Coagulation factor 5/8, C-terminal domain | Domain | |
IPR013783 | Immunoglobulin-like fold | Homologous Superfamily | |
IPR015202 | Galactose oxidase-like, Early set domain | Domain | |
IPR014756 | Immunoglobulin E-set | Homologous Superfamily | |
IPR037293 | Galactose oxidase, central domain superfamily | Homologous Superfamily | |
IPR006652 | Kelch repeat type 1 | Repeat | |
IPR011043 | Galactose oxidase/kelch, beta-propeller | Homologous Superfamily | |
IPR008979 | Galactose-binding-like domain superfamily | Homologous Superfamily |