Crystal Structure of the MukE-MukF Complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Winged helix DNA-binding domain | 8003374 | 3000034 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | MukF middle domain-like | 8056322 | 3002344 | SCOP2B (2022-06-29) |
B | SCOP2 Family | MukF(KicB) N-terminal domain-like | 8003373 | 4000289 | SCOP2 (2022-06-29) |
B | SCOP2 Family | MukF middle domain-like | 8091370 | 4000276 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | Winged helix DNA-binding domain | 8003374 | 3000034 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | MukF middle domain-like | 8056322 | 3002344 | SCOP2 (2022-06-29) |
C | SCOP2B Superfamily | Winged helix DNA-binding domain | 8053910 | 3000034 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Winged helix DNA-binding domain | 8053907 | 3000034 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Winged helix DNA-binding domain | 8053907 | 3000034 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Winged helix DNA-binding domain | 8053910 | 3000034 | SCOP2B (2022-06-29) |
E | SCOP2 Family | MukE-like | 8045685 | 4004616 | SCOP2 (2022-06-29) |
E | SCOP2 Superfamily | Winged helix DNA-binding domain | 8053910 | 3000034 | SCOP2 (2022-06-29) |
E | SCOP2 Superfamily | Winged helix DNA-binding domain | 8053907 | 3000034 | SCOP2 (2022-06-29) |
F | SCOP2B Superfamily | Winged helix DNA-binding domain | 8053910 | 3000034 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Winged helix DNA-binding domain | 8053907 | 3000034 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | KicB | e3euhA1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: KicB | ECOD (1.6) |
A | MukF_M | e3euhA2 | A: alpha bundles | X: STAT-like | H: MukF C-terminal domain-like (From Topology) | T: MukF C-terminal domain-like | F: MukF_M | ECOD (1.6) |
B | KicB | e3euhB3 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: KicB | ECOD (1.6) |
B | MukF_M | e3euhB4 | A: alpha bundles | X: STAT-like | H: MukF C-terminal domain-like (From Topology) | T: MukF C-terminal domain-like | F: MukF_M | ECOD (1.6) |
C | MukE_C | e3euhC3 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: MukE_C | ECOD (1.6) |
C | MukE_N | e3euhC4 | A: a+b two layers | X: Chromosome partition protein mukE N-terminal domain (From Topology) | H: Chromosome partition protein mukE N-terminal domain (From Topology) | T: Chromosome partition protein mukE N-terminal domain | F: MukE_N | ECOD (1.6) |
D | MukE_C | e3euhD1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: MukE_C | ECOD (1.6) |
D | MukE_N | e3euhD2 | A: a+b two layers | X: Chromosome partition protein mukE N-terminal domain (From Topology) | H: Chromosome partition protein mukE N-terminal domain (From Topology) | T: Chromosome partition protein mukE N-terminal domain | F: MukE_N | ECOD (1.6) |
E | MukE_C | e3euhE3 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: MukE_C | ECOD (1.6) |
E | MukE_N | e3euhE4 | A: a+b two layers | X: Chromosome partition protein mukE N-terminal domain (From Topology) | H: Chromosome partition protein mukE N-terminal domain (From Topology) | T: Chromosome partition protein mukE N-terminal domain | F: MukE_N | ECOD (1.6) |
F | MukE_C | e3euhF3 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: MukE_C | ECOD (1.6) |
F | MukE_N | e3euhF4 | A: a+b two layers | X: Chromosome partition protein mukE N-terminal domain (From Topology) | H: Chromosome partition protein mukE N-terminal domain (From Topology) | T: Chromosome partition protein mukE N-terminal domain | F: MukE_N | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF17193 | MukF C-terminal domain (MukF_C) | MukF C-terminal domain | This presumed domain is found at the C-terminus of the MukF protein. | Domain | |
PF17192 | MukF middle domain (MukF_M) | MukF middle domain | The kicA and kicB genes are found upstream of mukB. It has been suggested that the kicB gene encodes a killing factor and the kicA gene codes for a protein that suppresses the killing function of the kicB gene product [1]. It was also demonstrated th ... | Domain | |
PF04288 | MukE-like family (MukE) | MukE-like family | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR005582 | Chromosome partition protein MukF | Family | |
IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily | |
IPR036141 | MukF, middle domain superfamily | Homologous Superfamily | |
IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily | |
IPR033439 | Chromosome partition protein MukF, winged-helix domain | Domain | |
IPR038198 | MukF, C-terminal domain superfamily | Homologous Superfamily | |
IPR033441 | Chromosome partition protein MukF, C-terminal domain | Domain | |
IPR033440 | Chromosome partition protein MukF, middle domain | Domain | |
IPR042038 | MukE, N-terminal domain | Homologous Superfamily | |
IPR042037 | MukE, C-terminal domain | Homologous Superfamily | |
IPR007385 | Prokaryotic chromosome segregation/condensation protein MukE | Family |