SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-1H TOCSY | 50mM sodium phosphate; 240mM [U-2H] DHPC; 54mM [U-2H] DMPC; 6mM [U-2H] DMPG; 90% H2O/10% D2O | 90% H2O/10% D2O | 0.05 | 7.2 | ambient | 298 | |
2 | 2D 1H-1H NOESY | 50mM sodium phosphate; 240mM [U-2H] DHPC; 54mM [U-2H] DMPC; 6mM [U-2H] DMPG; 90% H2O/10% D2O | 90% H2O/10% D2O | 0.05 | 7.2 | ambient | 298 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 600 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
molecular dynamics | TopSpin |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | target function |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 25 |
Representative Model | 1 (closest to the average) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | collection | TopSpin | 2.1 | Bruker Biospin |
2 | chemical shift assignment | Sparky | 3.114 | Goddard |
3 | peak picking | Sparky | 3.114 | Goddard |
4 | structure solution | CYANA | 2.1 | Guntert, Mumenthaler and Wuthrich |
5 | refinement | CYANA | Guntert, Mumenthaler and Wuthrich |