SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-1H TOCSY | 2 mM a2N(1-17), 50 % [U-99% 2H] TFE, 25 mM sodium phosphate, 300 mM sodium chloride | trifluoroethanol/water | 6.5 | ambient | 298 | ||
2 | 2D 1H-1H NOESY | 2 mM a2N(1-17), 50 % [U-99% 2H] TFE, 25 mM sodium phosphate, 300 mM sodium chloride | trifluoroethanol/water | 6.5 | ambient | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 600 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing | TopSpin |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 20 |
Conformers Submitted Total Number | 10 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | collection | TopSpin | 2.1 | Bruker Biospin |
2 | processing | TopSpin | 2.1 | Bruker Biospin |
3 | chemical shift assignment | Sparky | Goddard | |
4 | chemical shift calculation | Sparky | Goddard | |
5 | peak picking | Sparky | Goddard | |
6 | data analysis | Sparky | Goddard | |
7 | geometry optimization | TALOS | Cornilescu, Delaglio and Bax | |
8 | structure solution | CYANA | Guntert, Mumenthaler and Wuthrich | |
9 | refinement | CYANA | Guntert, Mumenthaler and Wuthrich |