SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-1H COSY | 1.3 mg/mL peptide | 93% H2O/7% D2O | 0 | 5.6 | 1 atm | 298 | Bruker AVANCE III 600 |
2 | 2D 1H-1H TOCSY | 1.3 mg/mL peptide | 93% H2O/7% D2O | 0 | 5.6 | 1 atm | 298 | Bruker AVANCE III 600 |
3 | 2D 1H-1H NOESY | 1.3 mg/mL peptide | 93% H2O/7% D2O | 0 | 5.6 | 1 atm | 298 | Bruker AVANCE 800 |
4 | 2D 1H-1H NOESY | 1.3 mg/mL peptide | 93% H2O/7% D2O | 0 | 5.6 | 1 atm | 298 | Bruker AVANCE 800 |
5 | 2D 1H-15N HSQC | 1.3 mg/mL peptide | 93% H2O/7% D2O | 0 | 5.6 | 1 atm | 298 | Bruker AVANCE III 600 |
6 | 2D 1H-13C HSQC | 1.3 mg/mL peptide | 93% H2O/7% D2O | 0 | 5.6 | 1 atm | 298 | Bruker AVANCE III 600 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE III | 600 |
2 | Bruker | AVANCE | 800 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing | final refined by explicit water | X-PLOR NIH |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (closest to the average) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
2 | data analysis | CARA | Keller and Wuthrich | |
3 | structure calculation | X-PLOR NIH | Schwieters, Kuszewski, Tjandra and Clore | |
4 | refinement | X-PLOR NIH | Schwieters, Kuszewski, Tjandra and Clore |