5BWM | pdb_00005bwm


GDP: GUANOSINE-5'-DIPHOSPHATE

GDP is a Ligand Of Interest in 5BWM designated by the RCSB
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Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5BWM_GDP_A_201Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5BWM_GDP_A_201Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5BWM_GDP_A_201Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5BWM_GDP_A_201 58% 37% 0.158 0.9381.13 1.34 3 430100%1
8GI6_GDP_A_201 99% 58% 0.051 0.9860.95 0.68 2 100100%1
1OW3_GDP_B_680 98% 39% 0.059 0.9851.05 1.33 1 300100%1
8FPX_GDP_A_201 97% 47% 0.063 0.981.02 1.03 2 200100%1
8GI3_GDP_A_201 97% 57% 0.068 0.9830.99 0.66 2 100100%1
8FPW_GDP_A_201 97% 48% 0.068 0.9820.92 1.07 - 200100%1
1TVK_GDP_B_1500 100% 23% 0.012 0.9992.28 0.95 3 280100%1
8QEG_GDP_A_401 100% 51% 0.031 0.9931.02 0.87 3 100100%1
8QEH_GDP_A_405 100% 55% 0.03 0.9930.89 0.85 1 100100%1
1RRG_GDP_A_183 100% 17% 0.036 0.9972.05 1.56 7 300100%1
2CXX_GDP_B_2401 100% 29% 0.031 0.9891.26 1.57 1 300100%1