6YMQ | pdb_00006ymq


NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 6YMQ designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter6YMQ_NAG_H_201Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter6YMQ_NAG_H_201Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter6YMQ_NAG_H_201Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
6YMQ_NAG_H_201 31% 86% 0.187 0.8570.27 0.44 - -00100%1
6YMQ_NAG_G_201 20% 89% 0.204 0.8150.2 0.42 - -0093%1
6YMQ_NAG_J_201 17% 89% 0.234 0.8110.21 0.41 - -00100%1
6YMQ_NAG_I_201 9% 89% 0.254 0.7520.2 0.42 - -1093%1
6YMQ_NAG_D000_201 3% 89% 0.355 0.7130.21 0.41 - -00100%1
6YMQ_NAG_K_201 3% 84% 0.316 0.6680.29 0.46 - -00100%1
6YYE_NAG_A_201 46% 83% 0.203 0.9390.3 0.48 - -00100%1
5ELI_NAG_B_201 41% 38% 0.18 0.8970.8 1.62 1 320100%1
3H0C_NAG_A_794 100% 56% 0.021 0.9950.61 1.08 - 100100%1
5F9W_NAG_A_510 100% 88% 0.023 0.9940.24 0.43 - -00100%1
5LDS_NAG_B_1007 100% 67% 0.022 0.9950.48 0.79 - -00100%1
5O5D_NAG_A_601 100% 65% 0.022 0.9940.32 0.99 - 100100%1
6MUG_NAG_G_629 100% 76% 0.022 0.9940.35 0.58 - -00100%1