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233,249 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Fang, K.Y."

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Search Summary

This query matches 23 Structures.

Refinements

Structure Determination Methodology

experimental (23)

Scientific Name of Source Organism

	Homo sapiens (11)
	Anabaena sp. (1)
	Gallus gallus (1)
	Methylorubrum extorquens (1)
	Nostoc sp. PCC 7120 = FACHB-418 (1)
	Pyrococcus furiosus (1)
	Sus scrofa (1)

Taxonomy

	Eukaryota (13)
	Bacteria (3)
	Archaea (1)

Experimental Method

	X-RAY DIFFRACTION (11)
	SOLUTION NMR (9)
	ELECTRON MICROSCOPY (3)

Polymer Entity Type

	Protein (17)
	DNA (6)

Refinement Resolution (Å)

	1.5 - 2.0 (8)
	2.0 - 2.5 (3)
	3.0 - 3.5 (3)

Release Date

	2000 - 2004 (12)
	2005 - 2009 (5)
	2010 - 2014 (1)
	2020 - 2024 (5)

Enzyme Classification Name

	Hydrolases (6)
	Transferases (3)
	Oxidoreductases (1)
	Isomerases (1)

Symmetry Type

	Asymmetric (9)
	Cyclic (5)
	Dihedral (3)

SCOP Classification

	All beta proteins (5)
	Alpha and beta proteins (a/b) (3)
	Alpha and beta proteins (a+b) (4)
	Artifacts (2)
	All alpha proteins (1)
	Small proteins (2)

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1 to 23 of 23 Structures

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1DGO	Download File View File

SOLUTION STRUCTURE OF A URACIL CONTAINING HAIRPIN DNA

Ghosh, M., Kumar, N.V., Varshney, U., Chary, K.V.R.

(2000) Nucleic Acids Res 28: 1906-1912

Released	2000-05-03
Method	SOLUTION NMR
Macromolecule	URACIL CONTAINING HAIRPIN DNA (nucleic acid)

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1E3F	Download File View File

Structure of human transthyretin complexed with bromophenols: a new mode of binding

Ghosh, M., Meerts, I.A.T.M., Cook, A., Bergman, A., Brouwer, A., Johnson, L.N.

(2000) Acta Crystallogr D Biol Crystallogr 56: 1085

Released	2000-08-29
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	TRANSTHYRETIN (protein)

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1E4H	Download File View File

Structure of human transthyretin complexed with bromophenols: a new mode of binding

Ghosh, M., Meerts, I.A.T.M., Cook, A., Bergman, A., Brouwer, A., Johnson, L.N.

(2000) Acta Crystallogr D Biol Crystallogr 56: 1085

Released	2000-08-29
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	TRANSTHYRETIN (protein)
Unique Ligands	GOL, PBR

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1E5A	Download File View File

Structure of human transthyretin complexed with bromophenols: a new mode of binding

Ghosh, M., Meerts, I.A.T.M., Cook, A., Bergman, A., Brouwer, A., Johnson, L.N.

(2000) Acta Crystallogr D Biol Crystallogr 56: 1085

Released	2000-08-29
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	TRANSTHYRETIN (protein)
Unique Ligands	TBP

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1H4I	Download File View File

Methylobacterium extorquens methanol dehydrogenase

Ghosh, M., Anthony, C., Harlos, K., Goodwin, M.G., Blake, C.

(1995) Structure 3: 177

Released	2001-06-14
Method	X-RAY DIFFRACTION 1.94 Å
Organisms	Methylorubrum extorquens
Macromolecule	METHANOL DEHYDROGENASE SUBUNIT 1 (protein) METHANOL DEHYDROGENASE SUBUNIT 2 (protein)
Unique Ligands	CA, PQQ

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1HDI	Download File View File

Pig muscle 3-PHOSPHOGLYCERATE KINASE complexed with 3-PG and MgADP.

Szilagyi, A.N., Ghosh, M., Garman, E., Vas, M.

(2001) J Mol Biology 306: 499-511

Released	2001-02-26
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Sus scrofa
Macromolecule	PHOSPHOGLYCERATE KINASE (protein)
Unique Ligands	3PG, AMP, MG

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1IDX	Download File View File

Structural Basis for Poor Excision from Hairpin DNA: NMR Study

Ghosh, M., Rumpal, N., Varshney, U., Chary, K.V.

(2002) Eur J Biochem 269: 1886-1894

Released	2002-05-08
Method	SOLUTION NMR
Macromolecule	5'-D(APGPGPAPTPCPCPTPTPUPTPGPGPAPTPCPCPT)-3' (nucleic acid)

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1II1	Download File View File

Structural Basis for Poor Uracil Excision from Hairpin DNA: NMR Study

Ghosh, M., Rumpal, N., Varshney, U., Chary, K.V.

(2002) Eur J Biochem 269: 1886-1894

Released	2002-05-08
Method	SOLUTION NMR
Macromolecule	5'-D(APGPGPAPTPCPCPUPTPTPTPGPGPAPTPCPCPT)-3' (nucleic acid)

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1PV9	Download File View File

Prolidase from Pyrococcus furiosus

Maher, M.J., Ghosh, M., Grunden, A.M., Menon, A.L., Adams, M.W., Freeman, H.C., Guss, J.M.

(2004) Biochemistry 43: 2771-2783

Released	2004-03-23
Method	X-RAY DIFFRACTION 2 Å
Organisms	Pyrococcus furiosus
Macromolecule	Xaa-Pro dipeptidase (protein)
Unique Ligands	ZN

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1QE7	Download File View File

SOLUTION STRUCTURE OF A URACIL CONTAINING HAIRPIN DNA

Chary, K.V.R., Ghosh, M.

(1999) Nucleic Acids Res 27: 3938-3944

Released	2000-02-02
Method	SOLUTION NMR
Macromolecule	URACIL CONTAINING HAIRPIN 22-MER DNA (nucleic acid)

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1RLY	Download File View File

RDC-derived models of the zinc ribbon domain of human general transcription TFIIB (zinc bound structures)

Ghosh, M., Ikura, M.

(2004) Biochem J 378: 317-324

Released	2004-05-25
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Transcription initiation factor IIB (protein)
Unique Ligands	ZN

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1RO4	Download File View File

RDC-derived models of the zinc ribbon domain of human general transcription factor TFIIB (zinc free structures)

Ghosh, M., Ikura, M.

(2004) Biochem J 378: 317-324

Released	2004-05-25
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Transcription initiation factor IIB (protein)

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1ZM8	Download File View File

Apo Crystal structure of Nuclease A from Anabaena sp.

Ghosh, M., Meiss, G., Pingoud, A., London, R.E., Pedersen, L.C.

(2005) J Biological Chem 280: 27990-27997

Released	2005-06-21
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Anabaena sp.
Macromolecule	Nuclease (protein)
Unique Ligands	MN, NA, SO4

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2KHX	Download File View File

Drosha double-stranded RNA binding motif

Mueller, G.A., Miller, M., Ghosh, M., DeRose, E.F., London, R.E., Hall, T.

(2010) Silence 1: 2-2

Released	2010-02-23
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Ribonuclease 3 (protein)

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2O3B	Download File View File

Crystal structure complex of Nuclease A (NucA) with intra-cellular inhibitor NuiA

Ghosh, M., Meiss, G., Pingoud, A.M., London, R.E., Pedersen, L.C.

(2007) J Biological Chem 282: 5682-5690

Released	2006-12-19
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Nostoc sp. PCC 7120 = FACHB-418
Macromolecule	Nuclease (protein) Sugar-non-specific nuclease inhibitor (protein)
Unique Ligands	MES, MG, NI

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2OKV	Download File View File

c-Myc DNA Unwinding Element Binding Protein

Bae, B., Nair, S.K.

(2007) J Biological Chem 282: 10441-10448

Released	2007-01-30
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	Probable D-tyrosyl-tRNA(Tyr) deacylase 1 (protein)
Unique Ligands	MG

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2VAH	Download File View File

Solution structure of a B-DNA hairpin at low pressure.

Williamson, M.P., Wilton, D.J., Ghosh, M., Chary, K.V.A., Akasaka, K.

(2008) Nucleic Acids Res 36: 4032

Released	2007-09-11
Method	SOLUTION NMR
Macromolecule	5'-D(APGPGPAPTPCPCPTPUPTP TPGPGPAPTPCPCPT)-3' (nucleic acid)

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2VAI	Download File View File

Solution structure of a B-DNA hairpin at high pressure

Williamson, M.P., Wilton, D.J., Ghosh, M., Chary, K.V.A., Akasaka, K.

(2008) Nucleic Acids Res 36: 4032-4037

Released	2007-09-11
Method	SOLUTION NMR
Macromolecule	5'-D(APGPGPAPTPCPCPTPUPTP TPGPGPAPTPCPCPT)-3' (nucleic acid)

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6T3Y	Download File View File

Improved High Resolution Structure of MHC Class II complex

Halabi, S., Moncrieffe, M.C., Kaufman, J.

(2021) PLoS Biol 19: e3001057-e3001057

Released	2020-11-25
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Gallus gallus
Macromolecule	MHC class II alpha chain (protein) MHC class II beta chain 2 (protein)
Unique Ligands	ACT, GOL