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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "He, H."

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Search Summary

This query matches 77 Structures.

Refinements

Structure Determination Methodology

experimental (77)

Scientific Name of Source Organism

	Homo sapiens (44)
	Escherichia coli K-12 (4)
	Plasmodium falciparum (4)
	Plasmodium vivax Sal-1 (4)
	Mus musculus (3)
	Saccharomyces cerevisiae S288C (3)
	Alternaria alternata (2)
	Pseudomonas amygdali pv. tabaci (2)
	Rattus norvegicus (2)
	Toxoplasma gondii (2)

More...

Taxonomy

	Eukaryota (67)
	Bacteria (9)
	other sequences (1)

Experimental Method

	X-RAY DIFFRACTION (76)
	ELECTRON MICROSCOPY (1)

Polymer Entity Type

	Protein (76)
	RNA (2)
	DNA (1)

Refinement Resolution (Å)

	1.0 - 1.5 (4)
	1.5 - 2.0 (27)
	2.0 - 2.5 (29)
	2.5 - 3.0 (12)
	3.0 - 3.5 (2)
	3.5 - 4.0 (2)
	> 4.5 (1)

Release Date

	2000 - 2004 (3)
	2005 - 2009 (8)
	2010 - 2014 (33)
	2015 - 2019 (22)
	2020 - 2024 (11)

Enzyme Classification Name

	Transferases (28)
	Hydrolases (14)
	Lyases (8)
	Oxidoreductases (6)

Symmetry Type

	Asymmetric (51)
	Cyclic (31)

SCOP Classification

	Alpha and beta proteins (a+b) (13)
	Alpha and beta proteins (a/b) (8)
	Artifacts (5)
	All beta proteins (3)

AllSelected

1 to 25 of 77 Structures

Page 1 of 4

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1GHD \| pdb_00001ghd	Download File View File

Crystal structure of the glutaryl-7-aminocephalosporanic acid acylase by mad phasing

Ding, Y., Jiang, W., Mao, X., He, H., Zhang, S., Tang, H., Bartlam, M., Ye, S., Jiang, F., Liu, Y., Zhao, G., Rao, Z.

(2002) J Biological Chem 277: 10256-10264

Released	2003-07-08
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Pseudomonas sp. 130
Macromolecule	GLUTARYL-7-AMINOCEPHALOSPORANIC ACID ACYLASE (protein)

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1GHE \| pdb_00001ghe	Download File View File

CRYSTAL STRUCTURE OF TABTOXIN RESISTANCE PROTEIN COMPLEXED WITH AN ACYL COENZYME A

He, H., Ding, Y., Bartlam, M., Sun, F., Le, Y., Qin, X., Tang, H., Zhang, R., Joachimiak, A., Liu, Y., Zhao, N., Rao, Z.

(2003) J Mol Biology 325: 1019-1030

Released	2003-01-14
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Pseudomonas amygdali pv. tabaci
Macromolecule	ACETYLTRANSFERASE (protein)
Unique Ligands	ACO

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1J4J \| pdb_00001j4j	Download File View File

Crystal Structure of Tabtoxin Resistance Protein (form II) complexed with an Acyl Coenzyme A

He, H., Ding, Y., Bartlam, M., Zhang, R., Duke, N., Joachimiak, A., Shao, Y., Cao, Z., Tang, H., Liu, Y., Jiang, F., Liu, J., Zhao, N., Rao, Z.

(2003) J Mol Biology 325: 1019-1030

Released	2003-06-03
Method	X-RAY DIFFRACTION 2.55 Å
Organisms	Pseudomonas amygdali pv. tabaci
Macromolecule	TABTOXIN RESISTANCE PROTEIN (protein)
Unique Ligands	ACO

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1X70 \| pdb_00001x70	Download File View File

HUMAN DIPEPTIDYL PEPTIDASE IV IN COMPLEX WITH A BETA AMINO ACID INHIBITOR

Kim, D., Wang, L., Beconi, M., Eiermann, G.J., Fisher, M.H., He, H., Hickey, G.J., Leiting, B., Lyons, K.

(2005) J Med Chem 48: 141-151

Released	2005-01-18
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens
Macromolecule	Dipeptidyl peptidase IV (protein)
Unique Ligands	715, NA, NAG
Unique branched monosaccharides	NAG, NDG

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3DLJ \| pdb_00003dlj	Download File View File

Crystal structure of human carnosine dipeptidase 1

Dong, A., Dobrovetsky, E., Seitova, A., He, H., Tempel, W., Kozieradzki, I., Arrowsmith, C.H., Weigelt, J., Bountra, C., Edwards, A.M., Bochkarev, A., Cossar, D., Structural Genomics Consortium (SGC)

To be published

Released	2008-08-19
Method	X-RAY DIFFRACTION 2.26 Å
Organisms	Homo sapiens
Macromolecule	Beta-Ala-His dipeptidase (protein)
Unique Ligands	SO4, UNX, ZN

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3ENM \| pdb_00003enm	Download File View File

The structure of the MAP2K MEK6 reveals an autoinhibitory dimer

Min, X., Akella, R., He, H., Humphreys, J.M., Tsutakawa, S., Lee, S.-J., Tainer, J.A., Cobb, M.H., Goldsmith, E.J.

(2009) Structure 17: 96-104

Released	2009-03-03
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Homo sapiens
Macromolecule	Dual specificity mitogen-activated protein kinase kinase 6 (protein)
Unique Ligands	EDO, GOL, SO4

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3GFC \| pdb_00003gfc	Download File View File

Crystal Structure of Histone-binding protein RBBP4

Amaya, M.F., Dong, A., Li, Z., He, H., Ni, S., Edwards, A.M., Arrowsmith, C.H., Weigelt, J., Bountra, C., Bochkarev, A., Min, J., Ouyang, H., Structural Genomics Consortium (SGC)

(2011) Protein Cell 2: 202-214

Released	2009-04-14
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	Histone-binding protein RBBP4 (protein)

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3HM6 \| pdb_00003hm6	Download File View File

Crystal structure of the cytoplasmic domain of human plexin B1

Tong, Y., He, H., Shen, L., Tempel, W., MacKenzie, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Weigelt, J., Bochkarev, A., Park, H., Structural Genomics Consortium (SGC)

(2009) J Biological Chem 284: 35962-35972

Released	2009-06-09
Method	X-RAY DIFFRACTION 2.402 Å
Organisms	Homo sapiens
Macromolecule	Plexin-B1 (protein) Unknown peptide (protein)
Unique Ligands	UNX

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3HX4 \| pdb_00003hx4	Download File View File

Crystal structure of CDPK1 of Toxoplasma gondii, TGME49_101440, in presence of calcium

Wernimont, A.K., Artz, J.D., Finnerty, P., Xiao, T., He, H., MacKenzie, F., Sinestera, G., Hassani, A.A., Wasney, G., Vedadi, M., Lourido, S., Bochkarev, A., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Weigelt, J., Sibley, D.L., Hui, R., Lin, Y.H., Structural Genomics Consortium (SGC)

(2010) Nat Struct Mol Biol 17: 596-601

Released	2009-07-21
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Toxoplasma gondii
Macromolecule	Calmodulin-domain protein kinase 1 (protein)
Unique Ligands	ANP, CA, GOL, SO4

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3I2N \| pdb_00003i2n	Download File View File

Crystal Structure of WD40 repeats protein WDR92

Amaya, M.F., Li, Z., He, H., Seitova, A., Ni, S., Edwards, A.M., Arrowsmith, C.H., Weigelt, J., Bountra, C., Bochkarev, A., Min, J., Ouyang, H., Structural Genomics Consortium (SGC)

(2011) Protein Cell 2: 202-214

Released	2009-08-18
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Homo sapiens
Macromolecule	WD repeat-containing protein 92 (protein)

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3IG3 \| pdb_00003ig3	Download File View File

Crystal structure of mouse Plexin A3 intracellular domain

He, H., Zhang, X.

(2009) Proc Natl Acad Sci U S A 106: 15610-15615

Released	2009-08-25
Method	X-RAY DIFFRACTION 1.99 Å
Organisms	Mus musculus
Macromolecule	Plxna3 protein (protein)
Unique Ligands	GOL

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3K9J \| pdb_00003k9j	Download File View File

Transposase domain of Metnase

Goodwin, K.D., He, H., Imasaki, T., Lee, S.-H., Georgiadis, M.M.

(2010) Biochemistry 49: 5705-5713

Released	2010-07-14
Method	X-RAY DIFFRACTION 1.903 Å
Organisms	Homo sapiens
Macromolecule	Histone-lysine N-methyltransferase SETMAR (protein)
Unique Ligands	CA, EDO

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3K9K \| pdb_00003k9k	Download File View File

Transposase domain of Metnase

Goodwin, K.D., He, H., Imasaki, T., Lee, S.-H., Georgiadis, M.M.

(2010) Biochemistry 49: 5705-5713

Released	2010-07-14
Method	X-RAY DIFFRACTION 2.55 Å
Organisms	Homo sapiens
Macromolecule	Histone-lysine N-methyltransferase SETMAR (protein)

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3KU2 \| pdb_00003ku2	Download File View File

Crystal Structure of inactivated form of CDPK1 from toxoplasma gondii, TGME49.101440

Wernimont, A.K., Artz, J.D., Finnerty, P., Xiao, T., He, H., Mackenzie, F., Sinestera, G., Hassani, A.A., Wasney, G., Vedadi, M., Lourido, S., Bochkarev, A., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Weigelt, J., Sibley, D.L., Hui, R., Lin, Y.H., Structural Genomics Consortium (SGC)

(2010) Nat Struct Mol Biol 17: 596-601

Released	2010-02-16
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Toxoplasma gondii
Macromolecule	Calmodulin-domain protein kinase 1 (protein)
Unique Ligands	ANP, UNX

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3MQ4 \| pdb_00003mq4	Download File View File

Metabotropic glutamate receptor mGluR7 complexed with LY341495 antagonist

Dobrovetsky, E., Khutoreskaya, G., Seitova, A., He, H., Weigelt, J., Edwards, A.M., Arrowsmith, C.H., Bountra, C., Cossar, D., Bochkarev, A., Structural Genomics Consortium (SGC)

To be published

Released	2010-06-09
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Homo sapiens
Macromolecule	Metabotropic glutamate receptor 7 (protein)
Unique Ligands	MG, Z99

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3NWN \| pdb_00003nwn	Download File View File

Crystal structure of the human KIF9 motor domain in complex with ADP

Zhu, H., Tempel, W., He, H., Shen, Y., Wang, J., Brothers, G., Landry, R., Arrowsmith, C.H., Edwards, A.M., Sundstrom, M., Weigelt, J., Bochkarev, A., Park, H., Structural Genomics Consortium (SGC)

To be published

Released	2010-07-21
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	Kinesin-like protein KIF9 (protein)
Unique Ligands	ADP, CL, MG, UNX

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3OW8 \| pdb_00003ow8	Download File View File

Crystal Structure of the WD repeat-containing protein 61

Tempel, W., Li, Z., Chao, X., Lam, R., Wernimont, A.K., He, H., Seitova, A., Pan, P.W., Li, Y., Bountra, C., Weigelt, J., Arrowsmith, C.H., Edwards, A.M., Bochkarev, A., Min, J., Structural Genomics Consortium (SGC)

(2011) Protein Cell 2: 202-214

Released	2010-09-29
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	WD repeat-containing protein 61 (protein)
Unique Ligands	UNX

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3RYT \| pdb_00003ryt	Download File View File

The Plexin A1 intracellular region in complex with Rac1

Zhang, X., He, H.

(2012) Sci Signal 5: ra6-ra6

Released	2012-01-18
Method	X-RAY DIFFRACTION 3.582 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	Plexin-A1 (protein) Ras-related C3 botulinum toxin substrate 1 (protein)
Unique Ligands	GNP, MG

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3V2U \| pdb_00003v2u	Download File View File

Crystal structure of the yeast GAL regulon complex of the repressor, Gal80p, and the transducer, Gal3p, with galactose and ATP

Lavy, T., Kumar, P.R., He, H., Joshua-Tor, L.

(2012) Genes Dev 26: 294-303

Released	2012-02-08
Method	X-RAY DIFFRACTION 2.105 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	Galactose/lactose metabolism regulatory protein GAL80 (protein) Protein GAL3 (protein)
Unique Ligands	ATP, GLA, GOL, MG

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3V5R \| pdb_00003v5r	Download File View File

Crystal structure of the unliganded form of Gal3p

Lavy, T., Kumar, P.R., He, H., Joshua-Tor, L.

(2012) Genes Dev 26: 294-303

Released	2012-02-08
Method	X-RAY DIFFRACTION 2.099 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	Protein GAL3 (protein)
Unique Ligands	SO4

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4HC4 \| pdb_00004hc4	Download File View File

Human HMT1 hnRNP methyltransferase-like protein 6 (S. cerevisiae)

Dong, A., Zeng, H., He, H., El Bakkouri, M., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Brown, P.J., Wu, H., Structural Genomics Consortium (SGC)

(2016) Biochem J 473: 3049-3063

Released	2012-10-17
Method	X-RAY DIFFRACTION 1.97 Å
Organisms	Homo sapiens
Macromolecule	Protein arginine N-methyltransferase 6 (protein)
Unique Ligands	EDO, GOL, SAH

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4I79 \| pdb_00004i79	Download File View File

Crystal structure of human NUP43

Xu, C., Tempel, W., Li, Z., He, H., Wernimont, A.K., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Min, J., Structural Genomics Consortium (SGC)

(2015) FEBS Lett 589: 3247-3253

Released	2013-02-27
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Homo sapiens
Macromolecule	Nucleoporin Nup43 (protein) floating chain, unknown sequence (protein)
Unique Ligands	UNX

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4IKP \| pdb_00004ikp	Download File View File

Crystal structure of coactivator-associated arginine methyltransferase 1 with methylenesinefungin

Dong, A., Dombrovski, L., He, H., Ibanez, G., Wernimont, A., Zheng, W., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Brown, P.J., Min, J., Luo, M., Wu, H., Structural Genomics Consortium (SGC)

(2019) Elife 8:

Released	2013-02-13
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	Histone-arginine methyltransferase CARM1 (protein)
Unique Ligands	4IK, GOL, UNX

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4JXM \| pdb_00004jxm	Download File View File

Crystal structure of RRP9 WD40 repeats

Wu, X., Tempel, W., Xu, C., El Bakkouri, M., He, H., Seitova, A., Li, Y., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Min, J., Structural Genomics Consortium (SGC)

To be published

Released	2013-04-17
Method	X-RAY DIFFRACTION 1.92 Å
Organisms	Homo sapiens
Macromolecule	U3 small nucleolar RNA-interacting protein 2 (protein)
Unique Ligands	UNX