RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: Structure Author = "Hiraga, K."

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Help

NOT

Count

Add Subquery

Chemical Attributes

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 9 Structures.

Refinements

Structure Determination Methodology

experimental (9)

Scientific Name of Source Organism

	Pieris rapae (5)
	Scytalidium lignicola (2)
	Streptomyces nigrescens (1)
	Streptomyces sp. (1)

Taxonomy

	Eukaryota (7)
	Bacteria (2)

Experimental Method

	X-RAY DIFFRACTION (7)
	SOLUTION NMR (2)

Polymer Entity Type

Protein (9)

Refinement Resolution (Å)

	1.5 - 2.0 (5)
	2.0 - 2.5 (2)

Release Date

	1995 - 1999 (1)
	2000 - 2004 (1)
	2005 - 2009 (2)
	2015 - 2019 (5)

Enzyme Classification Name

	Transferases (5)
	Hydrolases (2)

Symmetry Type

Asymmetric (9)

SCOP Classification

All beta proteins (4)

AllSelected

1 to 9 of 9 Structures

Page 1 of 1

Sort by

Explore in 3D

1BHU \| pdb_00001bhu	Download File View File

THE 3D STRUCTURE OF THE STREPTOMYCES METALLOPROTEINASE INHIBITOR, SMPI, ISOLATED FROM STREPTOMYCES NIGRESCENS TK-23, NMR, MINIMIZED AVERAGE STRUCTURE

Tate, S., Ohno, A., Seeram, S.S., Hiraga, K., Oda, K., Kainosho, M.

(1998) J Mol Biology 282: 421-433

Released	1999-01-06
Method	SOLUTION NMR
Organisms	Streptomyces nigrescens
Macromolecule	METALLOPROTEINASE INHIBITOR (protein)

Explore in 3D

1F53 \| pdb_00001f53	Download File View File

NMR STRUCTURE OF KILLER TOXIN-LIKE PROTEIN SKLP

Ohki, S., Kariya, E., Hiraga, K., Wakamiya, A., Isobe, T., Oda, K., Kainosho, M.

(2001) J Mol Biology 305: 109-120

Released	2000-12-27
Method	SOLUTION NMR
Organisms	Streptomyces sp.
Macromolecule	YEAST KILLER TOXIN-LIKE PROTEIN (protein)

Explore in 3D

2IFR \| pdb_00002ifr	Download File View File

Crystal structure of Scytalido-glutamic peptidase with a peptide based transition state analog

Pillai, B., Cherney, M.M., Hiraga, K., Takada, K., Oda, K., James, M.N.

(2007) J Mol Biology 365: 343-361

Released	2006-10-03
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Scytalidium lignicola
Macromolecule	Octapeptide (protein) Scytalidopepsin B (protein)
Unique Ligands	ACY

Explore in 3D

2IFW \| pdb_00002ifw	Download File View File

Crystal structure of scytalido-glutamic peptidase with a transition state analog inhibitor

Pillai, B., Cherney, M.M., Hiraga, K., Takada, K., Oda, K., James, M.N.

(2007) J Mol Biology 365: 343-361

Released	2006-10-03
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Scytalidium lignicola
Macromolecule	Heptapeptide (protein) Scytalidopepsin B (protein)
Unique Ligands	ACY, GOL