RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: Structure Author = "Lee, W."

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Help

NOT

Count

Add Subquery

Chemical Attributes

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 109 Structures.

Refinements

Structure Determination Methodology

experimental (109)

Scientific Name of Source Organism

	Homo sapiens (38)
	Nonlabens marinus S1-08 (13)
	Thermoplasma acidophilum (6)
	Danio rerio (4)
	Mus musculus (4)
	Rattus norvegicus (4)
	Helicobacter pylori J99 (3)
	Hepatitis B virus adr4 (3)
	Mastigocladopsis repens (3)
	Staphylococcus aureus (3)

More...

Taxonomy

	Eukaryota (56)
	Bacteria (32)
	Archaea (12)
	Riboviria (8)
	Eukaryota (eukaryotes) (3)
	Duplodnaviria (1)
	Riboviria (RNA viruses and viroids) (1)

Experimental Method

	SOLUTION NMR (59)
	X-RAY DIFFRACTION (45)
	ELECTRON MICROSCOPY (4)
	INFRARED SPECTROSCOPY (1)
	SOLUTION SCATTERING (1)

Polymer Entity Type

	Protein (109)
	DNA (4)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (23)
	2.0 - 2.5 (12)
	2.5 - 3.0 (7)
	3.0 - 3.5 (2)
	3.5 - 4.0 (2)
	4.0 - 4.5 (2)

Release Date

	1990 - 1994 (2)
	1995 - 1999 (3)
	2000 - 2004 (15)
	2005 - 2009 (15)
	2010 - 2014 (11)
	2015 - 2019 (17)
	2020 - 2024 (46)

Enzyme Classification Name

	Hydrolases (14)
	Transferases (9)
	Ligases (4)
	Translocases (2)
	Oxidoreductases (1)

Membrane Protein Annotation

	PDBTM (18)
	MemProtMD (14)
	mpstruc (14)
	OPM (6)

Symmetry Type

	Asymmetric (89)
	Cyclic (15)
	Icosahedral (3)
	Dihedral (2)

SCOP Classification

	All alpha proteins (10)
	Alpha and beta proteins (a+b) (14)
	Membrane and cell surface proteins and peptides (17)
	Artifacts (9)
	Peptides (6)
	Alpha and beta proteins (a/b) (5)
	All beta proteins (5)
	Multi-domain proteins (alpha and beta) (3)
	Small proteins (3)

AllSelected

1 to 25 of 109 Structures

Page 1 of 5

Sort by

Explore in 3D

1CQ0 \| pdb_00001cq0	Download File View File

SOLUTION STRUCTURE OF A HUMAN HYPOCRETIN-2/OREXIN-B'SOLUTION STRUCTURE OF A HUMAN HYPOCRETIN-2/OREXIN-B '

Lee, K.-H., Bang, E.J., Chae, K.-J., Lee, D.W., Lee, W.

(1999) Eur J Biochem 266: 831-839

Released	2000-01-10
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	PROTEIN (NEW HYPOTHALAMIC NEUROPEPTIDE/OREXIN-B28) (protein)

Explore in 3D

1EJP \| pdb_00001ejp	Download File View File

SOLUTION STRUCTURE OF THE SYNDECAN-4 WHOLE CYTOPLASMIC DOMAIN

Lee, D., Oh, E.S., Woods, A., Couchman, J.R., Lee, W.

(2001) Biochemistry 40: 8471-8478

Released	2001-09-19
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	SYNDECAN-4 (protein)

Explore in 3D

1EJQ \| pdb_00001ejq	Download File View File

SOLUTION STRUCTURE OF THE SYNDECAN-4 WHOLE CYTOPLASMIC DOMAIN IN THE PRESENCE OF PHOSPHATIDYLINOSITOL 4,5-BISPHOSPHATE

Shin, J., Oh, E.S., Lee, D., Couchman, J.R., Lee, W.

To be published

Released	2001-03-07
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	SYNDECAN-4 (protein)

Explore in 3D

1FUW \| pdb_00001fuw	Download File View File

SOLUTION STRUCTURE AND BACKBONE DYNAMICS OF A DOUBLE MUTANT SINGLE-CHAIN MONELLIN(SCM) DETERMINED BY NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY

Sung, Y.H., Shin, J., Jung, J., Lee, W.

(2001) J Biological Chem 276: 19624-19630

Released	2001-06-06
Method	SOLUTION NMR
Organisms	Dioscoreophyllum cumminsii
Macromolecule	MONELLIN (protein)

Explore in 3D

1HVB \| pdb_00001hvb	Download File View File

CRYSTAL STRUCTURE OF STREPTOMYCES R61 DD-PEPTIDASE COMPLEXED WITH A NOVEL CEPHALOSPORIN ANALOG OF CELL WALL PEPTIDOGLYCAN

McDonough, M.A., Lee, W., Silvaggi, N.R., Mobashery, S., Kelly, J.A.

(2001) Proc Natl Acad Sci U S A 98: 1427-1431

Released	2001-02-07
Method	X-RAY DIFFRACTION 1.17 Å
Organisms	Streptomyces sp. R61
Macromolecule	D-ALANYL-D-ALANINE CARBOXYPEPTIDASE (protein)
Unique Ligands	CEH

Explore in 3D

1IQO \| pdb_00001iqo	Download File View File

Solution structure of MTH1880 from methanobacterium thermoautotrophicum

Lee, C.H., Shin, J., Bang, E., Jung, J.W., Yee, A., Arrowsmith, C.H., Lee, W.

(2004) Protein Sci 13: 1148-1154

Released	2002-07-24
Method	SOLUTION NMR
Organisms	Methanothermobacter
Macromolecule	HYPOTHETICAL PROTEIN MTH1880 (protein)

Explore in 3D

1IQS \| pdb_00001iqs	Download File View File

Minimized average structure of MTH1880 from Methanobacterium Thermoautotrophicum

Lee, C.H., Shin, J., Bang, E., Jung, J.W., Yee, A., Arrowsmith, C.H., Lee, W.

(2004) Protein Sci 13: 1148-1154

Released	2002-07-29
Method	SOLUTION NMR
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	MTH1880 (protein)

Explore in 3D

1L3X \| pdb_00001l3x	Download File View File

Solution Structure of Novel Disintegrin Salmosin

Shin, J., Lee, W.

(2003) Biochemistry 42: 14408-14415

Released	2003-12-23
Method	SOLUTION NMR
Organisms	Gloydius brevicauda
Macromolecule	platelet aggregation inhibitor disintegrin (protein)

Explore in 3D

1MNL \| pdb_00001mnl	Download File View File

HIGH-RESOLUTION SOLUTION STRUCTURE OF A SWEET PROTEIN SINGLE-CHAIN MONELLIN (SCM) DETERMINED BY NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY AND DYNAMICAL SIMULATED ANNEALING CALCULATIONS, 21 STRUCTURES

Lee, S.-Y., Lee, J.-H., Chang, H.-J., Jo, J.-M., Jung, J.-W., Lee, W.

(1999) Biochemistry 38: 2340-2346

Released	1999-06-08
Method	SOLUTION NMR
Organisms	Dioscoreophyllum cumminsii
Macromolecule	MONELLIN (protein)

Explore in 3D

1MPV \| pdb_00001mpv	Download File View File

Structure of bhpBR3, the BAFF-binding loop of BR3 embedded in a beta-hairpin peptide

Kayagaki, N., Yan, M., Seshasayee, D., Wang, H., Lee, W., French, D.M., Grewal, I.S., Cochran, A.G., Gordon, N.C., Yin, J., Starovasnik, M.A., Dixit, V.M.

(2002) Immunity 17: 515-524

Released	2002-10-30
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	BLyS Receptor 3 (protein)

Explore in 3D

1O07 \| pdb_00001o07	Download File View File

Crystal Structure of the complex between Q120L/Y150E mutant of AmpC and a beta-lactam inhibitor (MXG)

Meroueh, S.O., Minasov, G., Lee, W., Shoichet, B.K., Mobashery, S.

(2003) J Am Chem Soc 125: 9612-9618

Released	2003-08-26
Method	X-RAY DIFFRACTION 1.71 Å
Organisms	Escherichia coli
Macromolecule	Beta-lactamase (protein)
Unique Ligands	K, MXG

Explore in 3D

1P5A \| pdb_00001p5a	Download File View File

Conformational Mapping of the N-terminal Peptide of HIV-1 GP41 in lipid detergent and aqueous environments using 13C-enhanced Fourier Transform Infrared Spectroscopy

Gordon, L.M., Mobley, P.W., Lee, W., Eskandari, S., Kaznessis, Y.N., Sherman, M.A., Waring, A.J.

(2004) Protein Sci 13: 1012-1030

Released	2003-05-20
Method	INFRARED SPECTROSCOPY
Organisms	Human immunodeficiency virus type 1 group M subtype B (isolate BRU/LAI)
Macromolecule	Envelope polyprotein GP160 (protein)

Explore in 3D

1PES \| pdb_00001pes	Download File View File

NMR SOLUTION STRUCTURE OF THE TETRAMERIC MINIMUM TRANSFORMING DOMAIN OF P53

Lee, W., Harvey, T.S., Yin, Y., Yau, P., Litchfield, D., Arrowsmith, C.H.

(1994) Nat Struct Biol 1: 877-890

Released	1995-02-07
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	TUMOR SUPPRESSOR P53 (protein)

Explore in 3D

1PET \| pdb_00001pet	Download File View File

NMR SOLUTION STRUCTURE OF THE TETRAMERIC MINIMUM TRANSFORMING DOMAIN OF P53

Lee, W., Harvey, T.S., Yin, Y., Yau, P., Litchfield, D., Arrowsmith, C.H.

(1994) Nat Struct Biol 1: 877-890

Released	1995-02-07
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	TUMOR SUPPRESSOR P53 (protein)

Explore in 3D

1R02 \| pdb_00001r02	Download File View File

Solution structure of Human Orexin-A:Regulator of Appetite and Wakefulness

Kim, H.-Y., Hong, E., Kim, J.-I., Lee, W.

(2004) J Biochem Mol Biol 37: 565-573

Released	2004-09-19
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Orexin-A (protein)

Explore in 3D

1RJA \| pdb_00001rja	Download File View File

Solution Structure and Backbone Dynamics of the Nonreceptor Tyrosine Kinase PTK6/Brk SH2 Domain

Hong, E., Shin, J., Lee, W.

(2004) J Biological Chem 279: 29700-29708

Released	2004-07-20
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Tyrosine-protein kinase 6 (protein)

Explore in 3D

1RQ6 \| pdb_00001rq6	Download File View File

Solution structure of ribosomal protein S17E from Methanobacterium Thermoautotrophicum, Northeast Structural Genomics Consortium Target TT802 / Ontario Center for Structural Proteomics Target Mth0803

Wu, B., Yee, A., Huang, Y.J., Ramelot, T.A., Semesi, A., Jung, J.W., Edward, A., Lee, W., Kennedy, M.A., Montelione, G.T., Arrowsmith, C.H., Northeast Structural Genomics Consortium (NESG)

(2008) Protein Sci 17: 583-588

Released	2004-12-14
Method	SOLUTION NMR
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	30S ribosomal protein S17e (protein)

Explore in 3D

1RYJ \| pdb_00001ryj	Download File View File

Solution NMR Structure of Protein Mth1743 from Methanobacterium thermoautotrophicum. Ontario Centre for Structural Proteomics target MTH1743_1_70; Northeast Structural Genomics Consortium Target TT526.

Yee, A., Chang, X., Pineda-Lucena, A., Wu, B., Semesi, A., Le, B., Ramelot, T., Lee, G.M., Bhattacharyya, S., Gutierrez, P., Denisov, A., Lee, C.H., Cort, J.R., Kozlov, G., Liao, J., Finak, G., Chen, L., Wishart, D., Lee, W., McIntosh, L.P., Gehring, K., Kennedy, M.A., Edwards, A.M., Arrowsmith, C.H., Northeast Structural Genomics Consortium (NESG)

(2002) Proc Natl Acad Sci U S A 99: 1825-1830

Released	2004-02-24
Method	SOLUTION NMR
Organisms	Methanothermococcus thermolithotrophicus
Macromolecule	unknown (protein)

Explore in 3D

1VNA \| pdb_00001vna	Download File View File

PROTON NUCLEAR MAGNETIC RESONANCE AND DISTANCE GEOMETRY(SLASH)SIMULATED ANNEALING STUDIES ON THE VARIANT-1 NEUROTOXIN FROM THE NEW WORLD SCORPION CENTRUROIDES SCULPTURATUS EWING

Lee, W., Krishna, N.R.

(1994) Biochemistry 33: 2468-2475

Released	1994-01-31
Method	SOLUTION NMR
Organisms	Centruroides sculpturatus
Macromolecule	NEUROTOXIN (protein)

Explore in 3D

1VNB \| pdb_00001vnb	Download File View File

PROTON NUCLEAR MAGNETIC RESONANCE AND DISTANCE GEOMETRY(SLASH)SIMULATED ANNEALING STUDIES ON THE VARIANT-1 NEUROTOXIN FROM THE NEW WORLD SCORPION CENTRUROIDES SCULPTURATUS EWING

Lee, W., Krishna, N.R.

(1994) Biochemistry 33: 2468-2475

Released	1994-01-31
Method	SOLUTION NMR
Organisms	Centruroides sculpturatus
Macromolecule	NEUROTOXIN (protein)

Explore in 3D

1WPI \| pdb_00001wpi	Download File View File

Solution NMR Structure of Protein YKR049C from Saccharomyces cerevisiae. Ontario Centre for Structural Proteomics target YST0250_1_133; Northeast Structural Genomics Consortium YTYst250

Jung, J.W., Yee, A., Arrowsmith, C.H., Lee, W., Northeast Structural Genomics Consortium (NESG)

(2005) J Biochem Mol Biol 38: 550-554

Released	2005-09-13
Method	SOLUTION NMR
Organisms	Saccharomyces cerevisiae
Macromolecule	Hypothetical 15.6 kDa protein in NAP1-TRK2 intergenic region (protein)

Explore in 3D

1YY6 \| pdb_00001yy6	Download File View File

The Crystal Structure of the N-terminal domain of HAUSP/USP7 complexed with an EBNA1 peptide

Saridakis, V., Sheng, Y., Sarkari, F., Holowaty, M., Shire, K., Nguyen, T., Zhang, R., Liao, J., Lee, W., Edwards, A.M., Arrowsmith, C.H., Frappier, L.

(2005) Mol Cell 18: 25-36

Released	2005-04-05
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Epstein-Barr virus (strain B95-8) Homo sapiens
Macromolecule	Epstein-Barr nuclear antigen-1 (protein) Ubiquitin carboxyl-terminal hydrolase 7 (protein)
Unique Ligands	NA