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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Qin, L."

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Search Summary

This query matches 50 Structures.

Refinements

Structure Determination Methodology

experimental (50)

Scientific Name of Source Organism

	Homo sapiens (20)
	Cereibacter sphaeroides (4)
	Cereibacter sphaeroides 2.4.1 (4)
	Rasamsonia emersonii (4)
	Halalkalibacterium halodurans C-125 (3)
	synthetic construct (3)
	Arabidopsis thaliana (2)
	Catharanthus roseus (2)
	Clostridium botulinum (2)
	Echovirus E11 (2)

More...

Taxonomy

	Eukaryota (31)
	Bacteria (16)
	Riboviria (6)
	other sequences (3)
	Duplodnaviria (2)

Experimental Method

	X-RAY DIFFRACTION (43)
	ELECTRON MICROSCOPY (6)
	SOLUTION NMR (1)

Polymer Entity Type

	Protein (50)
	DNA (3)
	RNA (3)

Refinement Resolution (Å)

	1.0 - 1.5 (5)
	1.5 - 2.0 (10)
	2.0 - 2.5 (19)
	2.5 - 3.0 (9)
	3.0 - 3.5 (2)
	3.5 - 4.0 (2)
	4.0 - 4.5 (2)

Release Date

	1995 - 1999 (1)
	2000 - 2004 (2)
	2005 - 2009 (5)
	2010 - 2014 (11)
	2015 - 2019 (20)
	2020 - 2024 (10)
	2025 - 2029 (1)

Enzyme Classification Name

	Hydrolases (18)
	Oxidoreductases (10)
	Translocases (8)
	Transferases (8)

Membrane Protein Annotation

	PDBTM (16)
	MemProtMD (15)
	OPM (7)
	mpstruc (5)

Symmetry Type

	Asymmetric (37)
	Cyclic (12)
	Icosahedral (1)

SCOP Classification

	Membrane and cell surface proteins and peptides (8)
	All beta proteins (15)
	Artifacts (11)
	Alpha and beta proteins (a+b) (4)
	Coiled coil proteins (2)

AllSelected

1 to 25 of 50 Structures

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1BXD \| pdb_00001bxd	Download File View File

NMR STRUCTURE OF THE HISTIDINE KINASE DOMAIN OF THE E. COLI OSMOSENSOR ENVZ

Tanaka, T., Saha, S.K., Tomomori, C., Ishima, R., Liu, D., Tong, K.I., Park, H., Dutta, R., Qin, L., Swindells, M.B., Yamazaki, T., Ono, A.M., Kainosho, M., Inouye, M., Ikura, M.

(1998) Nature 396: 88-92

Released	1999-10-02
Method	SOLUTION NMR
Organisms	Escherichia coli BL21(DE3)
Macromolecule	PROTEIN (OSMOLARITY SENSOR PROTEIN (ENVZ)) (protein)
Unique Ligands	ANP

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1WDF \| pdb_00001wdf	Download File View File

crystal structure of MHV spike protein fusion core

Xu, Y., Liu, Y., Lou, Z., Qin, L., Li, X., Bai, Z., Tien, P., Gao, G.F., Rao, Z.

(2004) J Biological Chem 279: 30514-30522

Released	2004-06-15
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Murine hepatitis virus strain A59
Macromolecule	E2 glycoprotein (protein)

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1WDG \| pdb_00001wdg	Download File View File

crystal structure of MHV spike protein fusion core

Xu, Y., Liu, Y., Lou, Z., Qin, L., Li, X., Bai, Z., Tien, P., Gao, G.F., Rao, Z.

(2004) J Biological Chem 279: 30514-30522

Released	2004-06-15
Method	X-RAY DIFFRACTION 2.06 Å
Organisms	Murine hepatitis virus strain A59
Macromolecule	E2 glycoprotein (protein)

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2GSM \| pdb_00002gsm	Download File View File

Catalytic Core (Subunits I and II) of Cytochrome c oxidase from Rhodobacter sphaeroides

Qin, L., Hiser, C., Mulichak, A., Garavito, R.M., Ferguson-Miller, S.

(2006) Proc Natl Acad Sci U S A 103: 16117-16122

Released	2006-10-10
Method	X-RAY DIFFRACTION 2 Å
Organisms	Cereibacter sphaeroides
Macromolecule	Cytochrome c oxidase subunit 1 (protein) Cytochrome c oxidase subunit 2 (protein)
Unique Ligands	CA, CD, CU, DMU, HEA, MG, OH, TRD

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2NS2 \| pdb_00002ns2	Download File View File

Crystal Structure of Spindlin1

Zhao, Q., Qin, L., Jiang, F., Wu, B., Yue, W., Xu, F., Rong, Z., Yuan, H., Xie, X., Gao, Y., Bai, C., Bartlam, M.

(2007) J Biological Chem 282: 647-656

Released	2006-11-28
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens
Macromolecule	Spindlin-1 (protein)
Unique Ligands	PO4

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3DTU \| pdb_00003dtu	Download File View File

Catalytic core subunits (I and II) of cytochrome c oxidase from Rhodobacter sphaeroides complexed with deoxycholic acid

Qin, L., Mills, D.A., Buhrow, L., Hiser, C., Ferguson-Miller, S.

(2008) Biochemistry 47: 9931-9933

Released	2008-09-16
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Cereibacter sphaeroides
Macromolecule	Cytochrome c oxidase subunit 1 (protein) Cytochrome c oxidase subunit 2 (protein)
Unique Ligands	CA, CD, CU, DMU, DXC, HEA, HTO, MG, OH, PO4, TRD

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3FYE \| pdb_00003fye	Download File View File

Catalytic core subunits (I and II) of cytochrome c oxidase from Rhodobacter sphaeroides in the reduced state

Qin, L., Mills, D.A., Proshlyakov, D.A., Hiser, C., Ferguson-Miller, S.

(2009) Biochemistry 48: 5121-5130

Released	2009-06-16
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Cereibacter sphaeroides
Macromolecule	Cytochrome C oxidase subunit 1 (protein) Cytochrome C oxidase subunit 2 (protein)
Unique Ligands	CA, CD, CU1, DMU, HEA, HTO, MG, TRD, UNX

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3FYI \| pdb_00003fyi	Download File View File

Catalytic core subunits (I and II) of cytochrome C oxidase from Rhodobacter sphaeroides in the reduced state bound with cyanide

Qin, L., Mills, D.A., Proshlyakov, D.A., Hiser, C., Ferguson-Miller, S.

(2009) Biochemistry 48: 5121-5130

Released	2009-06-16
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Cereibacter sphaeroides
Macromolecule	Cytochrome c oxidase subunit 1 (protein) Cytochrome c oxidase subunit 2 (protein)
Unique Ligands	CA, CD, CU1, CYN, DMU, HEA, HTO, MG, TRD

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3OGG \| pdb_00003ogg	Download File View File

Crystal structure of the receptor binding domain of botulinum neurotoxin D

Zhang, Y., Gao, X., Qin, L., Buchko, G.W., Robinson, H., Varnum, S.M.

(2010) Biochem Biophys Res Commun 401: 498-503

Released	2010-09-01
Method	X-RAY DIFFRACTION 1.651 Å
Organisms	Clostridium botulinum
Macromolecule	Botulinum neurotoxin type D (protein)

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3OM3 \| pdb_00003om3	Download File View File

Catalytic core subunits (I and II) of cytochrome C oxidase from Rhodobacter sphaeroides with K362M mutation in the reduced state

Liu, J., Qin, L., Ferguson-Miller, S.

(2011) Proc Natl Acad Sci U S A 108: 1284-1289

Released	2011-02-02
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Cereibacter sphaeroides 2.4.1
Macromolecule	Cytochrome c oxidase subunit 2 (protein) Cytochrome c oxidase, aa3 type, subunit I (protein)
Unique Ligands	CA, CD, CU1, DMU, HEA, HTH, MG, TRD

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3OMA \| pdb_00003oma	Download File View File

Catalytic core subunits (I and II) of cytochrome C oxidase from Rhodobacter sphaeroides with K362M mutation

Liu, J., Qin, L., Ferguson-Miller, S.

(2011) Proc Natl Acad Sci U S A 108: 1284-1289

Released	2011-02-02
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Cereibacter sphaeroides 2.4.1
Macromolecule	Cytochrome c oxidase subunit 2 (protein) Cytochrome c oxidase, aa3 type, subunit I (protein)
Unique Ligands	CA, CD, CU, CU1, DMU, HEA, HTH, MG, OH, TRD

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3OMI \| pdb_00003omi	Download File View File

Catalytic core subunits (I and II) of cytochrome C oxidase from Rhodobacter sphaeroides with D132A mutation

Liu, J., Qin, L., Ferguson-Miller, S.

(2011) Proc Natl Acad Sci U S A 108: 1284-1289

Released	2011-02-02
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Cereibacter sphaeroides 2.4.1
Macromolecule	Cytochrome c oxidase subunit 2 (protein) Cytochrome c oxidase, aa3 type, subunit I (protein)
Unique Ligands	CA, CD, CL, CU, CU1, DMU, HEA, HTH, MG, OH, TRD

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3OMN \| pdb_00003omn	Download File View File

Catalytic core subunits (I and II) of cytochrome C oxidase from Rhodobacter sphaeroides with D132A mutation in the reduced state

Liu, J., Qin, L., Ferguson-Miller, S.

(2011) Proc Natl Acad Sci U S A 108: 1284-1289

Released	2011-02-02
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Cereibacter sphaeroides 2.4.1
Macromolecule	Cytochrome c oxidase subunit 2 (protein) Cytochrome c oxidase, aa3 type, subunit I (protein)
Unique Ligands	CA, CD, CL, CU1, DMU, HEA, HTH, MG, OH, TRD

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3PFJ \| pdb_00003pfj	Download File View File

Crystal structure of Cel7A from Talaromyces emersonii

Qin, L., Pereira, J.H., McAndrew, R.P., Simmons, B.A., Sapra, R., Adams, P.D., Sale, K.L.

Released	2011-11-02
Method	X-RAY DIFFRACTION 1.3611 Å
Organisms	Rasamsonia emersonii
Macromolecule	Cellobiohydrolase 1 catalytic domain (protein)
Unique Ligands	SO4
Unique branched monosaccharides	BMA, MAN, NAG

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3PFX \| pdb_00003pfx	Download File View File

Crystal structure of Cel7A from Talaromyces emersonii in complex with cellobiose

Qin, L., Pereira, J.H., McAndrew, R.P., Simmons, B.A., Sapra, R., Adams, P.D., Sale, K.L.

To be published

Released	2011-11-02
Method	X-RAY DIFFRACTION 1.2616 Å
Organisms	Rasamsonia emersonii
Macromolecule	Cellobiohydrolase 1 catalytic domain (protein)
Unique Ligands	SO4
Unique branched monosaccharides	BGC, BMA, MAN, NAG

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3PFZ \| pdb_00003pfz	Download File View File

Crystal structure of Cel7A from Talaromyces emersonii in complex with cellotetraose

Qin, L., Pereira, J.H., McAndrew, R.P., Simmons, B.A., Sapra, R., Adams, P.D., Sale, K.L.

To be published

Released	2011-11-02
Method	X-RAY DIFFRACTION 1.0993 Å
Organisms	Rasamsonia emersonii
Macromolecule	Cellobiohydrolase 1 catalytic domain (protein)
Unique Ligands	NAG, SO4
Unique branched monosaccharides	BGC, BMA, MAN, NAG

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3PL3 \| pdb_00003pl3	Download File View File

Crystal structure of Cel7A from Talaromyces emersonii in complex with cellopentaose

Qin, L., Pereira, J.H., McAndrew, R.P., Simmons, B.A., Sapra, R., Adams, P.D., Sale, K.L.

Released	2011-12-14
Method	X-RAY DIFFRACTION 1.1804 Å
Organisms	Rasamsonia emersonii
Macromolecule	Cellobiohydrolase 1 catalytic domain (protein)
Unique Ligands	SO4
Unique branched monosaccharides	BGC, BMA, NAG

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3PME \| pdb_00003pme	Download File View File

Crystal structure of the receptor binding domain of botulinum neurotoxin C/D mosaic serotype

Zhang, Y., Buchko, G.W., Qin, L., Robinson, H., Varnum, S.M., Seattle Structural Genomics Center for Infectious Disease (SSGCID)

(2011) Biochem Biophys Res Commun 404: 407-412

Released	2010-12-15
Method	X-RAY DIFFRACTION 1.56 Å
Organisms	Clostridium botulinum
Macromolecule	Type C neurotoxin (protein)
Unique Ligands	GOL, SO4

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4NJL \| pdb_00004njl	Download File View File

Crystal structure of middle east respiratory syndrome coronavirus S2 protein fusion core

Zhu, Y., Lu, L., Qin, L., Ye, S., Jiang, S., Zhang, R.

(2014) Nat Commun 5: 3067-3067

Released	2014-02-19
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Middle East respiratory syndrome-related coronavirus
Macromolecule	S protein (protein)
Unique Ligands	PGE

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4R4L \| pdb_00004r4l	Download File View File

Crystal structure of wt cGMP dependent protein kinase I alpha (PKGI alpha) leucine zipper

Reger, A.S., Guo, E., Yang, M.P., Qin, L., Kim, C.

(2015) Biochemistry 54: 4419-4422

Released	2015-09-23
Method	X-RAY DIFFRACTION 2.245 Å
Organisms	Homo sapiens
Macromolecule	cGMP-dependent protein kinase 1 (protein)
Unique Ligands	HEZ, SO4

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4R4M \| pdb_00004r4m	Download File View File

Crystal structure of C42L cGMP dependent protein kinase I alpha (PKGI alpha) leucine zipper

Reger, A.S., Guo, E., Yang, M.P., Qin, L., Kim, C.

(2015) Biochemistry 54: 4419-4422

Released	2015-09-23
Method	X-RAY DIFFRACTION 1.922 Å
Organisms	Homo sapiens
Macromolecule	cGMP-dependent protein kinase 1 (protein)
Unique Ligands	SO4

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4RWS \| pdb_00004rws	Download File View File

Crystal structure of CXCR4 and viral chemokine antagonist vMIP-II complex (PSI Community Target)

Qin, L., Kufareva, I., Holden, L., Wang, C., Zheng, Y., Wu, H., Fenalti, G., Han, G.W., Cherezov, V., Abagyan, R., Stevens, R.C., Handel, T.M., GPCR Network (GPCR)

(2015) Science 347: 1117-1122

Released	2015-02-11
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Homo sapiens Human herpesvirus 8 strain GK18 Tequatrovirus T4
Macromolecule	C-X-C chemokine receptor type 4/Endolysin chimeric protein (protein) Viral macrophage inflammatory protein 2 (protein)