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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Sun, T."

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Search Summary

This query matches 25 Structures.

Refinements

Structure Determination Methodology

experimental (25)

Scientific Name of Source Organism

	Mus musculus (6)
	Klebsiella pneumoniae (5)
	Homo sapiens (3)
	Rattus norvegicus (3)
	synthetic construct (3)
	Arabidopsis thaliana (2)
	Candidatus Nitrosocaldus yellowstonensis (1)
	Enterobacter cloacae (1)
	Escherichia coli (1)
	Escherichia coli O157:H7 (1)

More...

Taxonomy

	Eukaryota (16)
	Bacteria (9)
	other sequences (3)
	Archaea (1)

Experimental Method

	X-RAY DIFFRACTION (15)
	ELECTRON MICROSCOPY (10)

Polymer Entity Type

Protein (25)

Refinement Resolution (Å)

	1.5 - 2.0 (9)
	2.0 - 2.5 (6)
	3.0 - 3.5 (2)
	> 4.5 (8)

Release Date

	2000 - 2004 (5)
	2005 - 2009 (9)
	2010 - 2014 (5)
	2015 - 2019 (1)
	2020 - 2024 (5)

Enzyme Classification Name

	Transferases (3)
	Hydrolases (4)
	Ligases (1)

Membrane Protein Annotation

	MemProtMD (2)
	PDBTM (2)
	mpstruc (2)

Symmetry Type

	Asymmetric (21)
	Cyclic (7)

SCOP Classification

	Multi-domain proteins (alpha and beta) (4)
	All beta proteins (1)
	Alpha and beta proteins (a+b) (1)
	Alpha and beta proteins (a/b) (1)

AllSelected

1 to 25 of 25 Structures

Page 1 of 1

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1EHI \| pdb_00001ehi	Download File View File

D-ALANINE:D-LACTATE LIGASE (LMDDL2) OF VANCOMYCIN-RESISTANT LEUCONOSTOC MESENTEROIDES

Kuzin, A.P., Sun, T., Jorczak-Baillass, J., Healy, V.L., Walsh, C.T., Knox, J.R.

(2000) Structure 8: 463-470

Released	2000-05-23
Method	X-RAY DIFFRACTION 2.38 Å
Organisms	Leuconostoc mesenteroides
Macromolecule	D-ALANINE:D-LACTATE LIGASE (protein)
Unique Ligands	ADP, MG, PHY

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1M6K \| pdb_00001m6k	Download File View File

Structure of the OXA-1 class D beta-lactamase

Sun, T., Nukaga, M., Mayama, K., Braswell, E.H., Knox, J.R.

(2003) Protein Sci 12: 82-91

Released	2003-01-14
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Escherichia coli
Macromolecule	beta-lactamase OXA-1 (protein)
Unique Ligands	MPD

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1TDG \| pdb_00001tdg	Download File View File

Complex of S130G SHV-1 beta-lactamase with tazobactam

Sun, T., Bethel, C.R., Bonomo, R.A., Knox, J.R.

(2004) Biochemistry 43: 14111-14117

Released	2004-11-23
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Beta-lactamase SHV-1 (protein)
Unique Ligands	MA4, MDD, MPD, MRD, TBE

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1TDL \| pdb_00001tdl	Download File View File

Structure of Ser130Gly SHV-1 beta-lactamase

Sun, T., Bethel, C.R., Bonomo, R.A., Knox, J.R.

(2004) Biochemistry 43: 14111-14117

Released	2004-11-23
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Beta-lactamase SHV-1 (protein)
Unique Ligands	EPE, MA4

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1XX2 \| pdb_00001xx2	Download File View File

Refinement of P99 beta-lactamase from Enterobacter cloacae

Knox, J.R., Sun, T.

(1994) Biochemistry 33: 6762-6772

Released	2004-11-23
Method	X-RAY DIFFRACTION 1.88 Å
Organisms	Enterobacter cloacae
Macromolecule	Beta-lactamase (protein)

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3GK8 \| pdb_00003gk8	Download File View File

X-ray crystal structure of the Fab from MAb 14, mouse antibody against Canine Parvovirus

Hafenstein, S., Bowman, V., Sun, T., Nelson, C., Palermo, L., Chipman, P., Battisti, A., Parrish, C.

(2009) J Virol 83: 5556-5566

Released	2009-06-16
Method	X-RAY DIFFRACTION 2 Å
Organisms	Mus musculus
Macromolecule	Fab 14 Heavy Chain (protein) Fab 14 Light Chain (protein)

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3IY0 \| pdb_00003iy0	Download File View File

Variable domains of the x-ray structure of Fab 14 fitted into the cryoEM reconstruction of the virus-Fab 14 complex

Hafenstein, S., Bowman, V.D., Sun, T., Nelson, C.D., Palermo, L.M., Chipman, P.R., Battisti, A.J., Parrish, C.R., Rossmann, M.G.

(2009) J Virol 83: 5556-5566

Released	2009-05-12
Method	ELECTRON MICROSCOPY 12.5 Å
Organisms	Mus musculus
Macromolecule	Fab 14, heavy domain (protein) Fab 14, light domain (protein)

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3IY1 \| pdb_00003iy1	Download File View File

Variable domains of the WAM of Fab B fitted into the cryoEM reconstruction of the virus-Fab B complex

Hafenstein, S., Bowman, V.D., Sun, T., Nelson, C.D., Palermo, L.M., Battisti, A.J., Parrish, C.R., Rossmann, M.G.

(2009) J Virol 83: 5556-5566

Released	2009-05-12
Method	ELECTRON MICROSCOPY 18 Å
Organisms	Rattus norvegicus
Macromolecule	Fab B, heavy chain (protein) Fab B, light chain (protein)

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3IY2 \| pdb_00003iy2	Download File View File

Variable domains of the computer generated model (WAM) of Fab 6 fitted into the cryoEM reconstruction of the virus-Fab 6 complex

Hafenstein, S., Bowman, V.D., Sun, T., Nelson, C.D., Palermo, L.M., Chipman, P.R., Battisti, A.J., Parrish, C.R., Rossmann, M.G.

(2009) J Virol 83: 5556-5566

Released	2009-05-12
Method	ELECTRON MICROSCOPY 18 Å
Organisms	Mus musculus
Macromolecule	Antibody 6, heavy chain (protein) Antibody 6, light chain (protein)

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3IY3 \| pdb_00003iy3	Download File View File

Variable domains of the computer generated model (WAM) of Fab 8 fitted into the cryoEM reconstruction of the virus-Fab 8 complex

Hafenstein, S., Bowman, V.D., Sun, T., Nelson, C.D., Palermo, L.M., Chipman, P.R., Battisti, A.J., Parrish, C.R., Rossmann, M.G.

(2009) J Virol 83: 5556-5566

Released	2009-05-12
Method	ELECTRON MICROSCOPY 11.1 Å
Organisms	Mus musculus
Macromolecule	antibody fragment from neutralizing antibody 8 (heavy chain) (protein) antibody fragment from neutralizing antibody 8 (light chain) (protein)

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3IY4 \| pdb_00003iy4	Download File View File

Variable domains of the computer generated model (WAM) of Fab 15 fitted into the cryoEM reconstruction of the virus-Fab 15 complex

Hafenstein, S., Bowman, V.D., Sun, T., Nelson, C.D., Palermo, L.M., Chipman, P.R., Battisti, A.J., Parrish, C.R., Rossmann, M.G.

(2009) J Virol 83: 5556-5566

Released	2009-05-12
Method	ELECTRON MICROSCOPY 11.7 Å
Organisms	Mus musculus
Macromolecule	fragment of neutralizing antibody 15 (heavy chain) (protein) fragment of neutralizing antibody 15 (light chain) (protein)

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3IY5 \| pdb_00003iy5	Download File View File

Variable domains of the mouse Fab (1AIF) fitted into the cryoEM reconstruction of the virus-Fab 16 complex

Hafenstein, S., Bowman, V.D., Sun, T., Nelson, C.D., Palermo, L.M., Chipman, P.R., Battisti, A.J., Parrish, C.R., Rossmann, M.G.

(2009) J Virol 83: 5556-5566

Released	2009-05-12
Method	ELECTRON MICROSCOPY 18 Å
Organisms	Mus musculus
Macromolecule	antibody fragment IGG2A (heavy chain) (protein) antibody fragment IGG2A (light chain) (protein)

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3IY6 \| pdb_00003iy6	Download File View File

Variable domains of the computer generated model (WAM) of Fab E fitted into the cryoEM reconstruction of the virus-Fab E complex

Hafenstein, S., Bowman, V.D., Sun, T., Nelson, C.D., Palermo, L.M., Chipman, P.R., Battisti, A.J., Parrish, C.R., Rossmann, M.G.

(2009) J Virol 83: 5556-5566

Released	2009-05-12
Method	ELECTRON MICROSCOPY 12 Å
Organisms	Rattus norvegicus
Macromolecule	fragment from neutralizing antibody E (heavy chain) (protein) fragment from neutralizing antibody E (light chain) (protein)

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3IY7 \| pdb_00003iy7	Download File View File

Variable domains of the computer generated model (WAM) of Fab F fitted into the cryoEM reconstruction of the virus-Fab F complex

Hafenstein, S., Bowman, V.D., Sun, T., Nelson, C.D., Palermo, L.M., Chipman, P.R., Battisti, A.J., Parrish, C.R., Rossmann, M.G.

(2009) J Virol 83: 5556-5566

Released	2009-05-12
Method	ELECTRON MICROSCOPY 14 Å
Organisms	Rattus norvegicus
Macromolecule	fragment from neutralizing antibody F (heavy chain) (protein) fragment from neutralizing antibody F (light chain) (protein)

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3MWD \| pdb_00003mwd	Download File View File

Truncated Human ATP-Citrate Lyase with Citrate Bound

Fraser, M.E., Sun, T.

(2010) J Biological Chem 285: 27418-27428

Released	2010-06-16
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens
Macromolecule	ATP-citrate synthase (protein)
Unique Ligands	CIT

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3MWE \| pdb_00003mwe	Download File View File

Truncated Human ATP-Citrate Lyase with Tartrate Bound

Fraser, M.E., Sun, T.

(2010) J Biological Chem 285: 27418-27428

Released	2010-06-16
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens
Macromolecule	ATP-citrate synthase (protein)
Unique Ligands	MG, TLA

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3PFF \| pdb_00003pff	Download File View File

Truncated human atp-citrate lyase with ADP and tartrate bound

Fraser, M.E., Sun, T.

(2011) Acta Crystallogr Sect F Struct Biol Cryst Commun 67: 1168-1172

Released	2011-10-12
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	ATP-citrate synthase (protein)
Unique Ligands	ADP, MG, TLA

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4KE2 \| pdb_00004ke2	Download File View File

Crystal structure of the hyperactive Type I antifreeze from winter flounder

Sun, T., Lin, F.-H., Campbell, R.L., Allingham, J.S., Davies, P.L.

(2014) Science 343: 795-798

Released	2014-02-26
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Pseudopleuronectes americanus
Macromolecule	Type I hyperactive antifreeze protein (protein)

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4O65 \| pdb_00004o65	Download File View File

Crystal structure of the cupredoxin domain of amoB from Nitrosocaldus yellowstonii

Lawton, T.J., Ham, J., Sun, T., Rosenzweig, A.C.

(2014) Proteins 82: 2263-2267

Released	2014-04-02
Method	X-RAY DIFFRACTION 1.796 Å
Organisms	Candidatus Nitrosocaldus yellowstonensis
Macromolecule	Putative archaeal ammonia monooxygenase subunit B (protein)
Unique Ligands	CU, SO4

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5C7R \| pdb_00005c7r	Download File View File

Revealing surface waters on an antifreeze protein by fusion protein crystallography

Sun, T., Gauthier, S., Campbell, R.L., Davies, P.L.

(2015) J Phys Chem B 119: 12808-12815

Released	2015-09-30
Method	X-RAY DIFFRACTION 1.94 Å
Organisms	Escherichia coli O157:H7 Zoarces americanus
Macromolecule	Fusion protein of Maltose-binding periplasmic protein and Type-3 ice-structuring protein HPLC 12 (protein)
Unique Ligands	SO4
Unique branched monosaccharides	GLC

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6XBE \| pdb_00006xbe	Download File View File

Structure of NDM-1 in complex with macrocycle inhibitor NDM1i-1F

Worrall, L.J., Sun, T., Mulligan, V.K., Strynadka, N.C.J.

(2021) Proc Natl Acad Sci U S A 118:

Released	2021-03-31
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Klebsiella pneumoniae synthetic construct
Macromolecule	BlaNDM-4_1_JQ348841 (protein) macrocycle inhibitor NDM1i-1F (protein)
Unique Ligands	ZN

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6XBF \| pdb_00006xbf	Download File View File

Structure of NDM-1 in complex with macrocycle inhibitor NDM1i-1G

Worrall, L.J., Sun, T., Mulligan, V.K., Strynadka, N.C.J.

(2021) Proc Natl Acad Sci U S A 118:

Released	2021-03-31
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Klebsiella pneumoniae synthetic construct
Macromolecule	BlaNDM-4_1_JQ348841 (protein) macrocycle inhibitor NDM1i-1G (protein)
Unique Ligands	ZN

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6XCI \| pdb_00006xci	Download File View File

Structure of NDM-1 in complex with macrocycle inhibitor NDM1i-3D

Worrall, L.J., Sun, T., Mulligan, V.K., Strynadka, N.C.J.

(2021) Proc Natl Acad Sci U S A 118:

Released	2021-03-31
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Klebsiella pneumoniae synthetic construct
Macromolecule	BlaNDM-4_1_JQ348841 (protein) Macrocycle NDM1i-3D (protein)
Unique Ligands	ACT, CD, ZN