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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Yang, Y.A."

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Search Summary

This query matches 11 Structures.

Refinements

Structure Determination Methodology

experimental (11)

Scientific Name of Source Organism

	Salmonella enterica subsp. enterica serovar Typhi str. CT18 (7)
	Salmonella enterica subsp. enterica serovar Typhi (3)
	Nostoc sp. PCC 7120 = FACHB-418 (1)

Taxonomy

Bacteria (11)

Experimental Method

	X-RAY DIFFRACTION (10)
	SOLUTION NMR (1)

Polymer Entity Type

Protein (11)

Refinement Resolution (Å)

	1.5 - 2.0 (5)
	2.0 - 2.5 (5)

Release Date

	2010 - 2014 (1)
	2020 - 2024 (10)

Symmetry Type

	Cyclic (10)
	Asymmetric (1)

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1 to 11 of 11 Structures

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2L09 \| pdb_00002l09	Download File View File

Solution NMR Structure of Protein asr4154 from Nostoc sp. PCC7120 Northeast Structural Genomics Consortium target ID NsR143

Feldmann, E.A., Yang, Y.A., Ramelot, T.A., Cort, J.R., Janjua, H., Ciccosanti, C.A., Lee, D., Acton, T.B., Xiao, R.A., Everett, J.K., Montelione, G.T., Kennedy, M.A., Northeast Structural Genomics Consortium (NESG)

To be published

Released	2010-08-25
Method	SOLUTION NMR
Organisms	Nostoc sp. PCC 7120 = FACHB-418
Macromolecule	Asr4154 protein (protein)

Explore in 3D

6P4M \| pdb_00006p4m	Download File View File

Salmonella typhi PltB Homopentamer with Neu5Ac-alpha-2-3-Gal-beta-1-4-GlcNAc Glycans

Nguyen, T., Milano, S.K., Hillpot, E.C., Yang, Y.A., Song, J.

(2020) Cell Host Microbe 27: 937-949.e6

Released	2020-03-25
Method	X-RAY DIFFRACTION 1.802 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhi str. CT18
Macromolecule	Putative pertussis-like toxin subunit (protein)
Unique branched monosaccharides	GAL, NAG, SIA

Explore in 3D

6P4N \| pdb_00006p4n	Download File View File

Salmonella typhi PltB Homopentamer with Neu5Ac-alpha-2-6-Gal-beta-1-4-GlcNAc Glycans

Nguyen, T., Milano, S.K., Hillpot, E.C., Yang, Y.A., Song, J.

(2020) Cell Host Microbe 27: 937-949.e6

Released	2020-03-25
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhi str. CT18
Macromolecule	Putative pertussis-like toxin subunit (protein)
Unique branched monosaccharides	GAL, NAG, SIA

Explore in 3D

6P4P \| pdb_00006p4p	Download File View File

Salmonella typhi PltB Homopentamer N29K Mutant

Nguyen, T., Milano, S.K., Hillpot, E.C., Yang, Y.A., Song, J.

(2020) Cell Host Microbe 27: 937-949.e6

Released	2020-03-25
Method	X-RAY DIFFRACTION 2 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhi str. CT18
Macromolecule	Putative pertussis-like toxin subunit (protein)

Explore in 3D

6P4Q \| pdb_00006p4q	Download File View File

Salmonella typhi PltB Homopentamer N29K Mutant with Neu5Ac-alpha-2-3-Gal-beta-1-4-GlcNAc Glycans

Nguyen, T., Milano, S.K., Hillpot, E.C., Yang, Y.A., Song, J.

(2020) Cell Host Microbe 27: 937-949.e6

Released	2020-03-25
Method	X-RAY DIFFRACTION 1.77 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhi str. CT18
Macromolecule	Putative pertussis-like toxin subunit (protein)
Unique branched monosaccharides	GAL, NAG, SIA

Explore in 3D

6P4R \| pdb_00006p4r	Download File View File

Salmonella typhi PltB Homopentamer N29K Mutant with Neu5Ac-alpha-2-6-Gal-beta-1-4-GlcNAc glycans

Nguyen, T., Milano, S.K., Hillpot, E.C., Yang, Y.A., Song, J.

(2020) Cell Host Microbe 27: 937-949.e6

Released	2020-03-25
Method	X-RAY DIFFRACTION 1.87 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhi str. CT18
Macromolecule	Putative pertussis-like toxin subunit (protein)
Unique branched monosaccharides	GAL, NAG, SIA

Explore in 3D

6P4S \| pdb_00006p4s	Download File View File

Salmonella typhi PltB Homopentamer T65I Mutant

Nguyen, T., Milano, S.K., Hillpot, E.C., Yang, Y.A., Song, J.

(2020) Cell Host Microbe 27: 937-949.e6

Released	2020-03-25
Method	X-RAY DIFFRACTION 2 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhi str. CT18
Macromolecule	Putative pertussis-like toxin subunit (protein)

Explore in 3D

6P4T \| pdb_00006p4t	Download File View File

Salmonella typhi PltB Homopentamer T65I Mutant with Neu5Ac-alpha-2-3-Gal-beta-1-4-GlcNAc Glycans

Nguyen, T., Milano, S.K., Hillpot, E.C., Yang, Y.A., Song, J.

(2020) Cell Host Microbe 27: 937-949.e6

Released	2020-03-25
Method	X-RAY DIFFRACTION 2.17 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhi str. CT18
Macromolecule	Putative pertussis-like toxin subunit (protein)
Unique branched monosaccharides	GAL, NAG, SIA

Explore in 3D

6TYN \| pdb_00006tyn	Download File View File

Salmonella Typhi PltB Homopentamer with Neu-5NAc-9OAc-alpha-2-3-Gal-beta-1-4-GlcNAc Glycans

Nguyen, T., Milano, S.K., Yang, Y.A., Song, J.

(2020) PLoS Pathog 16: e1008336-e1008336

Released	2020-02-12
Method	X-RAY DIFFRACTION 2.33 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhi
Macromolecule	Pertussis like toxin subunit B (protein)
Unique branched monosaccharides	5N6, GAL, NAG

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6TYO \| pdb_00006tyo	Download File View File

Salmonella Typhi PltB Homopentamer with Neu-5NAc-4OAc-alpha-2-3-Gal-beta-1-4-GlcNAc Glycans

Nguyen, T., Milano, S.K., Yang, Y.A., Song, J.

(2020) PLoS Pathog 16: e1008336-e1008336

Released	2020-02-12
Method	X-RAY DIFFRACTION 2.04 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhi
Macromolecule	Pertussis-like toxin subunit (protein)
Unique branched monosaccharides	GAL, NAG, PKM

Explore in 3D

6TYQ \| pdb_00006tyq	Download File View File

Salmonella Typhi PltB Homopentamer with Neu-5NAc-9OAc-alpha-2-6-Gal-beta-1-4-GlcNAc Glycans

Nguyen, T., Milano, S.K., Yang, Y.A., Song, J.

(2020) PLoS Pathog 16: e1008336-e1008336

Released	2020-02-12
Method	X-RAY DIFFRACTION 1.88 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhi
Macromolecule	Pertussis-like toxin subunit B (protein)
Unique branched monosaccharides	5N6, GAL, NAG

1 to 11 of 11 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

2L09 | pdb_00002l09

Solution NMR Structure of Protein asr4154 from Nostoc sp. PCC7120 Northeast Structural Genomics Consortium target ID NsR143

6P4M | pdb_00006p4m

Salmonella typhi PltB Homopentamer with Neu5Ac-alpha-2-3-Gal-beta-1-4-GlcNAc Glycans

6P4N | pdb_00006p4n

Salmonella typhi PltB Homopentamer with Neu5Ac-alpha-2-6-Gal-beta-1-4-GlcNAc Glycans

6P4P | pdb_00006p4p

Salmonella typhi PltB Homopentamer N29K Mutant

6P4Q | pdb_00006p4q

Salmonella typhi PltB Homopentamer N29K Mutant with Neu5Ac-alpha-2-3-Gal-beta-1-4-GlcNAc Glycans

6P4R | pdb_00006p4r

Salmonella typhi PltB Homopentamer N29K Mutant with Neu5Ac-alpha-2-6-Gal-beta-1-4-GlcNAc glycans

6P4S | pdb_00006p4s

Salmonella typhi PltB Homopentamer T65I Mutant

6P4T | pdb_00006p4t

Salmonella typhi PltB Homopentamer T65I Mutant with Neu5Ac-alpha-2-3-Gal-beta-1-4-GlcNAc Glycans

6TYN | pdb_00006tyn

Salmonella Typhi PltB Homopentamer with Neu-5NAc-9OAc-alpha-2-3-Gal-beta-1-4-GlcNAc Glycans

6TYO | pdb_00006tyo

Salmonella Typhi PltB Homopentamer with Neu-5NAc-4OAc-alpha-2-3-Gal-beta-1-4-GlcNAc Glycans

6TYQ | pdb_00006tyq

Salmonella Typhi PltB Homopentamer with Neu-5NAc-9OAc-alpha-2-6-Gal-beta-1-4-GlcNAc Glycans

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Symmetry Type

2L09 | pdb_00002l09

6P4M | pdb_00006p4m

6P4N | pdb_00006p4n

6P4P | pdb_00006p4p

6P4Q | pdb_00006p4q

6P4R | pdb_00006p4r

6P4S | pdb_00006p4s

6P4T | pdb_00006p4t

6TYN | pdb_00006tyn

6TYO | pdb_00006tyo

6TYQ | pdb_00006tyq