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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Bernhard, F."

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Search Summary

This query matches 23 Structures.

Refinements

Structure Determination Methodology

experimental (23)

Scientific Name of Source Organism

	Brevibacillus parabrevis (4)
	Escherichia coli (4)
	Escherichia coli K-12 (4)
	Saccharomyces cerevisiae S288C (4)
	Bacillus subtilis (2)
	Halobacterium salinarum (2)
	Erwinia amylovora (1)
	Homo sapiens (1)
	Lama glama (1)
	Mus musculus (1)

More...

Taxonomy

	Bacteria (16)
	Eukaryota (6)
	Archaea (2)

Experimental Method

	SOLUTION NMR (13)
	X-RAY DIFFRACTION (9)
	ELECTRON MICROSCOPY (1)

Polymer Entity Type

Protein (23)

Refinement Resolution (Å)

	1.5 - 2.0 (1)
	2.0 - 2.5 (2)
	2.5 - 3.0 (1)
	3.0 - 3.5 (5)
	> 4.5 (1)

Release Date

	2000 - 2004 (2)
	2005 - 2009 (8)
	2010 - 2014 (9)
	2015 - 2019 (3)
	2020 - 2024 (1)

Enzyme Classification Name

	Transferases (7)
	Hydrolases (7)

Membrane Protein Annotation

	PDBTM (7)
	MemProtMD (6)
	OPM (4)
	mpstruc (1)

Symmetry Type

	Asymmetric (15)
	Cyclic (9)

SCOP Classification

	Membrane and cell surface proteins and peptides (4)
	Artifacts (7)
	All alpha proteins (6)
	Alpha and beta proteins (a/b) (3)

AllSelected

1 to 23 of 23 Structures

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1P4W \| pdb_00001p4w	Download File View File

Solution structure of the DNA-binding domain of the Erwinia amylovora RcsB protein

Pristovsek, P., Sengupta, K., Loehr, F., Schaefer, B., Wehland von Trebra, M., Rueterjans, H., Bernhard, F.

(2003) J Biological Chem 278: 17752-17759

Released	2003-06-17
Method	SOLUTION NMR
Organisms	Erwinia amylovora
Macromolecule	rcsB (protein)

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1SR2 \| pdb_00001sr2	Download File View File

Solution structure of the Escherichia coli YojN Histidine-Phosphotransferase (HPt) domain

Rogov, V.V., Bernhard, F., Loehr, F., Doetsch, V.

(2004) J Mol Biology 343: 1035-1048

Released	2004-10-26
Method	SOLUTION NMR
Organisms	Escherichia coli
Macromolecule	Putative sensor-like histidine kinase yojN (protein)

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2AYX \| pdb_00002ayx	Download File View File

Solution structure of the E.coli RcsC C-terminus (residues 700-949) containing linker region and phosphoreceiver domain

Rogov, V.V., Rogova, N.Y., Bernhard, F., Koglin, A., Lohr, F., Dotsch, V.

(2006) J Mol Biology 364: 68-79

Released	2006-09-26
Method	SOLUTION NMR
Organisms	Escherichia coli
Macromolecule	Sensor kinase protein rcsC (protein)

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2AYY \| pdb_00002ayy	Download File View File

Solution structure of the E.coli RcsC C-terminus (residues 700-816) containing linker region

Rogov, V.V., Rogova, N.Y., Bernhard, F., Koglin, A., Lohr, F., Dotsch, V.

(2006) J Mol Biology 364: 68-79

Released	2006-09-26
Method	SOLUTION NMR
Organisms	Escherichia coli
Macromolecule	Sensor kinase protein rcsC (protein)

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2AYZ \| pdb_00002ayz	Download File View File

Solution structure of the E.coli RcsC C-terminus (residues 817-949) containing phosphoreceiver domain

Rogov, V.V., Rogova, N.Y., Bernhard, F., Koglin, A., Lohr, F., Dotsch, V.

(2006) J Mol Biology 364: 68-79

Released	2006-09-26
Method	SOLUTION NMR
Organisms	Escherichia coli
Macromolecule	Sensor kinase protein rcsC (protein)

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2GDW \| pdb_00002gdw	Download File View File

Solution structure of the B. brevis TycC3-PCP in A/H-state

Koglin, A., Loehr, F., Rogov, V.V., Marahiel, M.A., Bernhard, F., Doetsch, V.

(2006) Science 312: 273-276

Released	2006-08-01
Method	SOLUTION NMR
Organisms	Brevibacillus parabrevis
Macromolecule	Tyrocidine synthetase III (protein)

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2GDX \| pdb_00002gdx	Download File View File

Solution structure of the B. brevis TycC3-PCP in H-state

Koglin, A., Loehr, F., Rogov, V.V., Marahiel, M.A., Bernhard, F., Doetsch, V.

(2006) Science 312: 273-276

Released	2006-08-01
Method	SOLUTION NMR
Organisms	Brevibacillus parabrevis
Macromolecule	Tyrocidine synthetase III (protein)

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2GDY \| pdb_00002gdy	Download File View File

Solution structure of the B. brevis TycC3-PCP in A-state

Koglin, A., Loehr, F., Rogov, V.V., Marahiel, M.A., Bernhard, F., Doetsch, V.

(2006) Science 312: 273-276

Released	2006-08-01
Method	SOLUTION NMR
Organisms	Brevibacillus parabrevis
Macromolecule	Tyrocidine synthetase III (protein)

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2K2Q \| pdb_00002k2q	Download File View File

complex structure of the external thioesterase of the Surfactin-synthetase with a carrier domain

Koglin, A., Lohr, F., Bernhard, F., Rogov, V.V., Frueh, D.P., Strieter, E.R., Mofid, M.R., Guntert, P., Wagner, G., Walsh, C.T., Marahiel, M.A., Dotsch, V.

(2008) Nature 454: 907-911

Released	2008-12-09
Method	SOLUTION NMR
Organisms	Bacillus subtilis Brevibacillus parabrevis
Macromolecule	Surfactin synthetase thioesterase subunit (protein) Tyrocidine synthetase 3 (Tyrocidine synthetase III) (protein)

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2KX7 \| pdb_00002kx7	Download File View File

Solution structure of the E.coli RcsD-ABL domain (residues 688-795)

Rogov, V.V., Schmoee, K., Rogova, N.Y., Loehr, F., Bernhard, F., Doetsch, V.

(2011) Structure 19: 577-587

Released	2011-04-06
Method	SOLUTION NMR
Organisms	Escherichia coli K-12
Macromolecule	Sensor-like histidine kinase yojN (protein)

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2L6X \| pdb_00002l6x	Download File View File

Solution NMR Structure of Proteorhodopsin.

Reckel, S., Gottstein, D., Stehle, J., Loehr, F., Takeda, M., Silvers, R., Kainosho, M., Glaubitz, C., Bernhard, F., Schwalbe, H., Guntert, P., Doetsch, V., Membrane Protein Structures by Solution NMR (MPSbyNMR)

(2011) Angew Chem Int Ed Engl 50: 11942-11946

Released	2011-11-09
Method	SOLUTION NMR
Organisms	uncultured marine gamma proteobacterium EBAC31A08
Macromolecule	Green-light absorbing proteorhodopsin (protein)
Unique Ligands	RET

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2L8Y \| pdb_00002l8y	Download File View File

Solution structure of the E. coli outer membrane protein RcsF (periplasmatic domain)

Rogov, V.V., Rogova, N.Y., Bernhard, F., Lohr, F., Doetsch, V.

(2011) J Biological Chem 286: 18775-18783

Released	2011-04-06
Method	SOLUTION NMR
Organisms	Escherichia coli K-12
Macromolecule	Protein rcsF (protein)

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2RON \| pdb_00002ron	Download File View File

The external thioesterase of the Surfactin-Synthetase

Koglin, A., Lohr, F., Bernhard, F., Rogov, V.V., Frueh, D.P., Strieter, E.R., Mofid, M.R., Guentert, P., Wagner, G., Walsh, C.T., Marahiel, M.A., Doetsch, V.

(2008) Nature 454: 907-911

Released	2008-08-12
Method	SOLUTION NMR
Organisms	Bacillus subtilis
Macromolecule	Surfactin synthetase thioesterase subunit (protein)

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3SJA \| pdb_00003sja	Download File View File

Crystal structure of S. cerevisiae Get3 in the open state in complex with Get1 cytosolic domain

Reitz, S., Wild, K., Sinning, I.

(2011) Science 333: 758-762

Released	2011-07-06
Method	X-RAY DIFFRACTION 3 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	ATPase GET3 (protein) Golgi to ER traffic protein 1 (protein)
Unique Ligands	PO4, ZN

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3SJB \| pdb_00003sjb	Download File View File

Crystal structure of S. cerevisiae Get3 in the open state in complex with Get1 cytosolic domain

Reitz, S., Wild, K., Sinning, I.

(2011) Science 333: 758-762

Released	2011-07-06
Method	X-RAY DIFFRACTION 3.3 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	ATPase GET3 (protein) Golgi to ER traffic protein 1 (protein)
Unique Ligands	PO4, ZN

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3SJC \| pdb_00003sjc	Download File View File

Crystal structure of S.cerevisiae Get3 in the semi-open state in complex with Get1 cytosolic domain

Reitz, S., Wild, K., Sinning, I.

(2011) Science 333: 758-762

Released	2011-07-06
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	ATPase GET3 (protein) Golgi to ER traffic protein 1 (protein)
Unique Ligands	ZN

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3SJD \| pdb_00003sjd	Download File View File

Crystal structure of S. cerevisiae Get3 with bound ADP-Mg2+ in complex with Get2 cytosolic domain

Reitz, S., Wild, K., Sinning, I.

(2011) Science 333: 758-762

Released	2011-07-13
Method	X-RAY DIFFRACTION 4.6 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	ATPase GET3 (protein) Golgi to ER traffic protein 2 (protein)
Unique Ligands	ADP, MG, ZN

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4BPD \| pdb_00004bpd	Download File View File

Structure determination of an integral membrane kinase

Li, D., Boland, C., Caffrey, M.

(2014) Cell Mol Life Sci 71: 4895

Released	2014-05-07
Method	X-RAY DIFFRACTION 3.3 Å
Organisms	Escherichia coli K-12
Macromolecule	DIACYLGLYCEROL KINASE (protein)
Unique Ligands	78M, ZN

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4D2E \| pdb_00004d2e	Download File View File

Crystal structure of an integral membrane kinase - v2.3

Li, D., Boland, C., Caffrey, M.

(2014) Cell Mol Life Sci 71: 4895

Released	2014-07-23
Method	X-RAY DIFFRACTION 2.28 Å
Organisms	Escherichia coli K-12
Macromolecule	DIACYLGLYCEROL KINASE (protein)
Unique Ligands	78M, 78N, FLC, NA, ZN

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5BR2 \| pdb_00005br2	Download File View File

Structure of bacteriorhodopsin crystallized from ND-MSP1

Nikolaev, M., Round, E., Gushchin, I., Gordeliy, V.

(2017) Cryst Growth Des 17: 945-948

Released	2016-09-14
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Halobacterium salinarum
Macromolecule	Bacteriorhodopsin (protein)
Unique Ligands	RET

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5BR5 \| pdb_00005br5	Download File View File

Structure of bacteriorhodopsin crystallized from ND-MSP1E3D1

Nikolaev, M., Round, E., Gushchin, I., Gordeliy, V.

(2017) Cryst Growth Des 17: 945-948

Released	2016-09-14
Method	X-RAY DIFFRACTION 2 Å
Organisms	Halobacterium salinarum
Macromolecule	Bacteriorhodopsin (protein)
Unique Ligands	RET

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5J9P \| pdb_00005j9p	Download File View File

KcsA in vitro

Matulef, K., Valiyaveetil, F.I.

(2016) Biochemistry 55: 4212-4219

Released	2016-07-20
Method	X-RAY DIFFRACTION 2.85 Å
Organisms	Mus musculus Streptomyces lividans
Macromolecule	Fab (protein) pH-gated potassium channel KcsA (protein)
Unique Ligands	K

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8POK \| pdb_00008pok	Download File View File

Cryo-EM structure of cell-free synthesized human histamine H2 receptor coupled to heterotrimeric Gs protein in lipid environment

Schnelle, K., Koeck, Z., Persechino, M., Umbach, S., Schihada, H., Januliene, D., Parey, K., Pockes, S., Kolb, P., Doetsch, V., Moeller, A., Hilger, D., Bernhard, F.

(2024) Nat Commun 15: 1831-1831

Released	2024-03-06
Method	ELECTRON MICROSCOPY 3.4 Å
Organisms	Homo sapiens Lama glama
Macromolecule	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 (protein) Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (protein) Histamine H2 receptor (protein) Isoform Gnas-2 of Guanine nucleotide-binding protein G(s) subunit alpha isoforms short (protein) Nanobody35 (protein)
Unique Ligands	HSM

1 to 23 of 23 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1P4W | pdb_00001p4w

1SR2 | pdb_00001sr2

2AYX | pdb_00002ayx

2AYY | pdb_00002ayy

2AYZ | pdb_00002ayz

2GDW | pdb_00002gdw

2GDX | pdb_00002gdx

2GDY | pdb_00002gdy

2K2Q | pdb_00002k2q

2KX7 | pdb_00002kx7

2L6X | pdb_00002l6x

2L8Y | pdb_00002l8y

2RON | pdb_00002ron

3SJA | pdb_00003sja

3SJB | pdb_00003sjb

3SJC | pdb_00003sjc

3SJD | pdb_00003sjd

4BPD | pdb_00004bpd

4D2E | pdb_00004d2e

5BR2 | pdb_00005br2

5BR5 | pdb_00005br5

5J9P | pdb_00005j9p

8POK | pdb_00008pok