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233,249 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Bowman, V.D."

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Search Summary

This query matches 48 Structures.

Refinements

Structure Determination Methodology

experimental (48)

Scientific Name of Source Organism

	Homo sapiens (11)
	Tequatrovirus T4 (7)
	Bacillus phage phi29 (6)
	Mus musculus (6)
	Escherichia phage RB49 (3)
	Rattus norvegicus (3)
	Bacteriophage sp. (2)
	Echovirus E7 (2)
	Escherichia phage alpha3 (2)
	Fischettivirus C1 (2)

More...

Taxonomy

	Eukaryota (21)
	Duplodnaviria (20)
	Riboviria (7)
	Monodnaviria (4)
	unclassified bacterial viruses (2)

Experimental Method

	ELECTRON MICROSCOPY (24)
	X-RAY DIFFRACTION (24)

Polymer Entity Type

	Protein (48)
	DNA (1)

Refinement Resolution (Å)

	0.5 - 1.0 (1)
	1.0 - 1.5 (3)
	1.5 - 2.0 (6)
	2.0 - 2.5 (2)
	2.5 - 3.0 (5)
	3.0 - 3.5 (4)
	3.5 - 4.0 (2)
	4.0 - 4.5 (1)
	> 4.5 (24)

Release Date

	2000 - 2004 (4)
	2005 - 2009 (27)
	2010 - 2014 (17)

Enzyme Classification Name

Hydrolases (10)

Symmetry Type

	Asymmetric (24)
	Cyclic (13)
	Icosahedral (12)
	Dihedral (1)

SCOP Classification

	Low resolution protein structures (3)
	All beta proteins (3)
	Alpha and beta proteins (a/b) (1)
	Artifacts (3)
	Small proteins (3)
	All alpha proteins (1)

AllSelected

1 to 25 of 48 Structures

Page 1 of 2

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1DGI \| pdb_00001dgi	Download File View File

Cryo-EM structure of human poliovirus(serotype 1)complexed with three domain CD155

He, Y., Bowman, V.D., Mueller, S., Bator, C.M., Bella, J., Peng, X., Baker, T.S., Wimmer, E., Kuhn, R.J., Rossmann, M.G.

(2000) Proc Natl Acad Sci U S A 97: 79-84

Released	2000-01-24
Method	ELECTRON MICROSCOPY 22 Å
Organisms	Homo sapiens Poliovirus 1
Macromolecule	POLIOVIRUS RECEPTOR (protein) VP1 (protein) VP2 (protein) VP3 (protein) VP4 (protein)

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1M0F \| pdb_00001m0f	Download File View File

Structural Studies of Bacteriophage alpha3 Assembly, Cryo-electron microscopy

Bernal, R.A., Hafenstein, S., Olson, N.H., Bowman, V.D., Chipman, P.R., Baker, T.S., Fane, B.A., Rossmann, M.G.

(2003) J Mol Biology 325: 11-24

Released	2002-12-25
Method	ELECTRON MICROSCOPY 16 Å
Organisms	Escherichia phage alpha3
Macromolecule	Capsid Protein F (protein) Major Spike Protein G (protein) Scaffolding Protein B (protein) Scaffolding protein D (protein)

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1NN8 \| pdb_00001nn8	Download File View File

CryoEM structure of poliovirus receptor bound to poliovirus

He, Y., Mueller, S., Chipman, P.R., Bator, C.M., Peng, X., Bowman, V.D., Mukhopadhyay, S., Wimmer, E., Kuhn, R.J., Rossmann, M.G.

(2003) J Virol 77: 4827-4835

Released	2004-01-27
Method	ELECTRON MICROSCOPY 15 Å
Organisms	Homo sapiens Human poliovirus 1 Mahoney
Macromolecule	coat protein VP1 (protein) coat protein VP2 (protein) coat protein VP3 (protein) coat protein VP4 (protein) poliovirus receptor (protein)
Unique Ligands	MYR

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1RB8 \| pdb_00001rb8	Download File View File

The phiX174 DNA binding protein J in two different capsid environments.

Bernal, R.A., Hafenstein, S., Esmeralda, R., Fane, B.A., Rossmann, M.G.

(2004) J Mol Biology 337: 1109-1122

Released	2004-04-13
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Escherichia phage alpha3 Sinsheimervirus phiX174
Macromolecule	Capsid protein (protein) Major spike protein (protein) Small core protein (protein) DNA (5'-D(PCPAPAPA)-3') (nucleic acid)
Unique Ligands	DC

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2NSU \| pdb_00002nsu	Download File View File

Crystal structure of the ectodomain of human transferrin receptor fitted into a cryo-EM reconstruction of canine parvovirus and feline transferrin receptor complex

Hafenstein, S., Kostyuchenko, V.A., Rossmann, M.G.

(2007) Proc Natl Acad Sci U S A 104: 6585-6589

Released	2007-03-27
Method	ELECTRON MICROSCOPY 27 Å
Organisms	Homo sapiens
Macromolecule	Transferrin receptor protein 1 (protein)

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2QZD \| pdb_00002qzd	Download File View File

Fitted structure of SCR4 of DAF into cryoEM density

Hafenstein, S., Bowman, V.D., Chipman, P.R., Bator Kelly, C.M., Lin, F., Medof, M.E., Rossmann, M.G.

(2007) J Virol 81: 12927-12935

Released	2007-10-30
Method	ELECTRON MICROSCOPY 14 Å
Organisms	Homo sapiens
Macromolecule	Complement decay-accelerating factor (protein)

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2QZF \| pdb_00002qzf	Download File View File

SCR1 of DAF from 1ojv fitted into cryoEM density

Hafenstein, S., Bowman, V.D., Chipman, P.R., Bator Kelly, C.M., Lin, F., Medof, M.E., Rossmann, M.G.

(2007) J Virol 81: 12927-12935

Released	2007-10-30
Method	ELECTRON MICROSCOPY 14 Å
Organisms	Homo sapiens
Macromolecule	Complement decay-accelerating factor (protein)

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2QZH \| pdb_00002qzh	Download File View File

SCR2/3 of DAF from the NMR structure 1nwv fitted into a cryoEM reconstruction of CVB3-RD complexed with DAF

Hafenstein, S., Bowman, V.D., Chipman, P.R., Bator Kelly, C.M., Lin, F., Medof, M.E., Rossmann, M.G.

(2007) J Virol 81: 12927-12935

Released	2007-10-30
Method	ELECTRON MICROSCOPY 14 Å
Organisms	Homo sapiens
Macromolecule	Complement decay-accelerating factor (protein)

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2X5I \| pdb_00002x5i	Download File View File

Crystal structure echovirus 7

Plevka, P., Hafenstein, S., Zhang, Y., Bowman, V.D., Chipman, P.R., Bator, C.M., Rossmann, M.G.

(2010) J Virol 84: 12665

Released	2010-12-22
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Echovirus E7
Macromolecule	VP1 (protein) VP2 (protein) VP3 (protein) VP4 (protein)
Unique Ligands	DAO

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3C6A \| pdb_00003c6a	Download File View File

Crystal Structure of the RB49 gp17 nuclease domain

Sun, S., Rossmann, M.G.

(2008) Cell 135: 1251-1262

Released	2009-01-13
Method	X-RAY DIFFRACTION 1.16 Å
Organisms	Escherichia phage RB49
Macromolecule	Terminase large subunit (protein)
Unique Ligands	MG

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3C6H \| pdb_00003c6h	Download File View File

Crystal Structure of the RB49 gp17 nuclease domain

Sun, S., Rossmann, M.G.

(2008) Cell 135: 1251-1262

Released	2009-01-13
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Escherichia phage RB49
Macromolecule	Terminase large subunit (protein)
Unique Ligands	MG

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3CPE \| pdb_00003cpe	Download File View File

Crystal Structure of T4 gp17

Sun, S., Rossmann, M.G.

(2008) Cell 135: 1251-1262

Released	2009-01-13
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Tequatrovirus T4
Macromolecule	DNA packaging protein Gp17 (protein)
Unique Ligands	NA, PO4

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3CSQ \| pdb_00003csq	Download File View File

Crystal and cryoEM structural studies of a cell wall degrading enzyme in the bacteriophage phi29 tail

Xiang, Y., Rossmann, M.G.

(2008) Proc Natl Acad Sci U S A 105: 9552-9557

Released	2008-07-01
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Bacillus phage phi29
Macromolecule	Morphogenesis protein 1 (protein)
Unique Ligands	ZN

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3CSR \| pdb_00003csr	Download File View File

Crystal and cryoEM structural studies of a cell wall degrading enzyme in the bacteriophage phi29 tail

Xiang, Y., Rossmann, M.G.

(2008) Proc Natl Acad Sci U S A 105: 9552-9557

Released	2008-07-01
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Bacillus phage phi29
Macromolecule	Morphogenesis protein 1 (protein)

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3CSZ \| pdb_00003csz	Download File View File

Crystal and cryoEM structural studies of a cell wall degrading enzyme in the bacteriophage phi29 tail

Xiang, Y., Rossmann, M.G.

(2008) Proc Natl Acad Sci U S A 105: 9552-9557

Released	2008-07-01
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Bacillus phage phi29
Macromolecule	Morphogenesis protein 1 (protein)
Unique branched monosaccharides	NAG

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3CT0 \| pdb_00003ct0	Download File View File

Crystal and cryoEM structural studies of a cell wall degrading enzyme in the bacteriophage phi29 tail

Xiang, Y., Rossmann, M.G.

(2008) Proc Natl Acad Sci U S A 105: 9552-9557

Released	2008-07-01
Method	X-RAY DIFFRACTION 1.77 Å
Organisms	Bacillus phage phi29
Macromolecule	Morphogenesis protein 1 (protein)
Unique branched monosaccharides	NAG

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3CT1 \| pdb_00003ct1	Download File View File

Crystal and cryoEM structural studies of a cell wall degrading enzyme in the bacteriophage phi29 tail

Xiang, Y., Rossmann, M.G.

(2008) Proc Natl Acad Sci U S A 105: 9552-9557

Released	2008-07-01
Method	X-RAY DIFFRACTION 1.51 Å
Organisms	Bacillus phage phi29
Macromolecule	Morphogenesis protein 1 (protein)
Unique branched monosaccharides	NAG

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3CT5 \| pdb_00003ct5	Download File View File

Crystal and cryoEM structural studies of a cell wall degrading enzyme in the bacteriophage phi29 tail

Xiang, Y., Rossmann, M.G.

(2008) Proc Natl Acad Sci U S A 105: 9552-9557

Released	2008-07-01
Method	X-RAY DIFFRACTION 1.37 Å
Organisms	Bacillus phage phi29
Macromolecule	Morphogenesis protein 1 (protein)
Unique branched monosaccharides	NAG

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3EPC \| pdb_00003epc	Download File View File

CryoEM structure of poliovirus receptor bound to poliovirus type 1

Zhang, P., Mueller, S., Morais, M.C., Bator, C.M., Bowman, V.D., Hafenstein, S., Wimmer, E., Rossmann, M.G.

(2008) Proc Natl Acad Sci U S A 105: 18284-18289

Released	2008-11-11
Method	ELECTRON MICROSCOPY 8 Å
Organisms	Homo sapiens Human poliovirus 1 Mahoney
Macromolecule	Poliovirus receptor (protein) Protein VP1 (protein) Protein VP2 (protein) Protein VP3 (protein) Protein VP4 (protein)
Unique Ligands	MYR, SPH

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3EPD \| pdb_00003epd	Download File View File

CryoEM structure of poliovirus receptor bound to poliovirus type 3

Zhang, P., Mueller, S., Morais, M.C., Bator, C.M., Bowman, V.D., Hafenstein, S., Wimmer, E., Rossmann, M.G.

(2008) Proc Natl Acad Sci U S A 105: 18284-18289

Released	2008-11-11
Method	ELECTRON MICROSCOPY 9 Å
Organisms	Homo sapiens Poliovirus 3
Macromolecule	Unique protein chains: 6
Unique Ligands	MYR, SPH

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3EPF \| pdb_00003epf	Download File View File

CryoEM structure of poliovirus receptor bound to poliovirus type 2

Zhang, P., Mueller, S., Morais, M.C., Bator, C.M., Bowman, V.D., Hafenstein, S., Wimmer, E., Rossmann, M.G.

(2008) Proc Natl Acad Sci U S A 105: 18284-18289

Released	2008-11-11
Method	ELECTRON MICROSCOPY 9 Å
Organisms	Homo sapiens Poliovirus type 2 strain Lansing
Macromolecule	Poliovirus receptor (protein) Protein VP1 (protein) Protein VP2 (protein) Protein VP3 (protein) Protein VP4 (protein)
Unique Ligands	MYR, SC4