RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: Citation Author = "Brautigam, C.A."

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Help

NOT

Count

Add Subquery

Chemical Attributes

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 155 Structures.

Refinements

Structure Determination Methodology

experimental (155)

Scientific Name of Source Organism

	Homo sapiens (62)
	Treponema pallidum subsp. pallidum str. Nichols (18)
	Mus musculus (15)
	Escherichia coli (14)
	Treponema pallidum (14)
	Saccharomyces cerevisiae (12)
	Saccharomyces cerevisiae S288C (7)
	Bos taurus (5)
	Rattus norvegicus (4)
	Escherichia coli K-12 (3)

More...

Taxonomy

	Eukaryota (92)
	Bacteria (64)
	other sequences (3)
	Archaea (2)
	Eukaryota (eukaryotes) (1)

Experimental Method

	X-RAY DIFFRACTION (143)
	ELECTRON MICROSCOPY (12)

Polymer Entity Type

	Protein (155)
	DNA (9)

Refinement Resolution (Å)

	1.0 - 1.5 (16)
	1.5 - 2.0 (43)
	2.0 - 2.5 (47)
	2.5 - 3.0 (27)
	3.0 - 3.5 (12)
	3.5 - 4.0 (7)
	4.0 - 4.5 (3)

Release Date

	1995 - 1999 (8)
	2000 - 2004 (7)
	2005 - 2009 (34)
	2010 - 2014 (36)
	2015 - 2019 (41)
	2020 - 2024 (27)
	2025 - 2029 (2)

Enzyme Classification Name

	Transferases (52)
	Hydrolases (32)
	Oxidoreductases (17)
	Isomerases (3)
	Translocases (1)

Membrane Protein Annotation

	OPM (3)
	MemProtMD (2)
	PDBTM (2)
	mpstruc (2)

Symmetry Type

	Asymmetric (105)
	Cyclic (45)
	Dihedral (6)
	Octahedral (4)
	Tetrahedral (1)

SCOP Classification

	Alpha and beta proteins (a/b) (54)
	All beta proteins (26)
	Alpha and beta proteins (a+b) (7)
	All alpha proteins (6)
	Artifacts (6)
	Multi-domain proteins (alpha and beta) (8)

AllSelected

1 to 25 of 155 Structures

Page 1 of 7

Sort by

Explore in 3D

1KFS \| pdb_00001kfs	Download File View File

DNA POLYMERASE I KLENOW FRAGMENT (E.C.2.7.7.7) MUTANT/DNA COMPLEX

Brautigam, C.A., Steitz, T.A.

(1998) J Mol Biology 277: 363-377

Released	1998-02-25
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Escherichia coli
Macromolecule	PROTEIN (DNA POLYMERASE I KLENOW FRAGMENT (E.C.2.7.7.7)) (protein) DNA (5'-D(GPCPTPTPAPCP*G)-3') (nucleic acid)
Unique Ligands	MG, ZN

Explore in 3D

1KRP \| pdb_00001krp	Download File View File

DNA polymerase I Klenow fragment (E.C.2.7.7.7) mutant/DNA complex

Brautigam, C.A., Steitz, T.A.

(1998) J Mol Biology 277: 363-377

Released	1998-02-25
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Escherichia coli
Macromolecule	PROTEIN (DNA POLYMERASE I KLENOW FRAGMENT (E.C.2.7.7.7)) (protein) DNA (5'-D(PTPTP*PST)-3') (nucleic acid)
Unique Ligands	ZN

Explore in 3D

1KSP \| pdb_00001ksp	Download File View File

DNA polymerase I Klenow fragment (E.C.2.7.7.7) mutant/DNA complex

Brautigam, C.A., Steitz, T.A.

(1998) J Mol Biology 277: 363-377

Released	1998-02-25
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Escherichia coli
Macromolecule	PROTEIN (DNA POLYMERASE I-KLENOW FRAGMENT (E.C.2.7.7.7)) (protein) DNA (5'-D(PTPTP*PST)-3') (nucleic acid)
Unique Ligands	ZN

Explore in 3D

1PK8 \| pdb_00001pk8	Download File View File

Crystal Structure of Rat Synapsin I C Domain Complexed to Ca.ATP

Brautigam, C.A., Chelliah, Y., Deisenhofer, J.

(2004) J Biological Chem 279: 11948-11956

Released	2004-03-23
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Rattus norvegicus
Macromolecule	rat synapsin I (protein)
Unique Ligands	ATP, CA, EDO

Explore in 3D

1PX2 \| pdb_00001px2	Download File View File

Crystal Structure of Rat Synapsin I C Domain Complexed to Ca.ATP (Form 1)

Brautigam, C.A., Chelliah, Y., Deisenhofer, J.

(2004) J Biological Chem 279: 11948-11956

Released	2004-03-23
Method	X-RAY DIFFRACTION 2.23 Å
Organisms	Rattus norvegicus
Macromolecule	Synapsin I (protein)
Unique Ligands	ATP, CA

Explore in 3D

1QSL \| pdb_00001qsl	Download File View File

KLENOW FRAGMENT COMPLEXED WITH SINGLE-STRANDED SUBSTRATE AND EUROPIUM (III) ION

Brautigam, C.A., Aschheim, K., Steitz, T.A.

(1999) Chem Biol 6: 901-908

Released	1999-06-30
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Escherichia coli
Macromolecule	DNA POLYMERASE I (protein) 5'-D(GPCPTPTPAPCPGPC)-3' (nucleic acid)
Unique Ligands	EU

Explore in 3D

1U3C \| pdb_00001u3c	Download File View File

Crystal Structure of the PHR domain of Cryptochrome 1 from Arabidopsis thaliana

Brautigam, C.A., Smith, B.S., Ma, Z., Palnitkar, M., Tomchick, D.R., Machius, M., Deisenhofer, J.

(2004) Proc Natl Acad Sci U S A 101: 12142-12147

Released	2004-08-24
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Arabidopsis thaliana
Macromolecule	Cryptochrome 1 apoprotein (protein)
Unique Ligands	CL, FAD, HEZ, MG, NDS

Explore in 3D

1U3D \| pdb_00001u3d	Download File View File

Crystal Structure of the PHR domain of Cryptochrome 1 from Arabidopsis thaliana with AMPPNP bound

Brautigam, C.A., Smith, B.S., Ma, Z., Palnitkar, M., Tomchick, D.R., Machius, M., Deisenhofer, J.

(2004) Proc Natl Acad Sci U S A 101: 12142-12147

Released	2004-08-24
Method	X-RAY DIFFRACTION 2.45 Å
Organisms	Arabidopsis thaliana
Macromolecule	Cryptochrome 1 apoprotein (protein)
Unique Ligands	ANP, CL, FAD, MG, NDS

Explore in 3D

1WCI \| pdb_00001wci	Download File View File

Reactivity modulation of human branched-chain alpha-ketoacid dehydrogenase by an internal molecular switch

Machius, M., Wynn, R.M., Chuang, J.L., Tomchick, D.R., Brautigam, C.A., Chuang, D.T.

(2006) Structure 14: 287

Released	2006-02-16
Method	X-RAY DIFFRACTION 1.84 Å
Organisms	Homo sapiens
Macromolecule	2-OXOISOVALERATE DEHYDROGENASE ALPHA SUBUNIT (protein) 2-OXOISOVALERATE DEHYDROGENASE BETA SUBUNIT (protein)
Unique Ligands	CL, GOL, K, MN, WWF

Explore in 3D

1XF9 \| pdb_00001xf9	Download File View File

Structure of NBD1 from murine CFTR- F508S mutant

Thibodeau, P.H., Brautigam, C.A., Machius, M., Thomas, P.J.

(2005) Nat Struct Mol Biol 12: 10-16

Released	2004-12-28
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Mus musculus
Macromolecule	Cystic fibrosis transmembrane conductance regulator (protein)
Unique Ligands	ACY, ATP, MG

Explore in 3D

1XFA \| pdb_00001xfa	Download File View File

Structure of NBD1 from murine CFTR- F508R mutant

Thibodeau, P.H., Brautigam, C.A., Machius, M., Thomas, P.J.

(2005) Nat Struct Mol Biol 12: 10-16

Released	2004-12-28
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Mus musculus
Macromolecule	Cystic fibrosis transmembrane conductance regulator (protein)
Unique Ligands	ACY, ATP, CL, MG

Explore in 3D

1XS5 \| pdb_00001xs5	Download File View File

The Crystal Structure of Lipoprotein Tp32 from Treponema pallidum

Deka, R.K., Neil, L., Hagman, K.E., Machius, M., Tomchick, D.R., Brautigam, C.A., Norgard, M.V.

(2004) J Biological Chem 279: 55644-55650

Released	2004-11-23
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Treponema pallidum
Macromolecule	Membrane lipoprotein TpN32 (protein)
Unique Ligands	MET

Explore in 3D

1ZMC \| pdb_00001zmc	Download File View File

Crystal Structure of Human dihydrolipoamide dehydrogenase complexed to NAD+

Brautigam, C.A., Chuang, J.L., Tomchick, D.R., Machius, M., Chuang, D.T.

(2005) J Mol Biology 350: 543-552

Released	2005-06-28
Method	X-RAY DIFFRACTION 2.53 Å
Organisms	Homo sapiens
Macromolecule	Dihydrolipoyl dehydrogenase, mitochondrial (protein)
Unique Ligands	FAD, NAD, SO4

Explore in 3D

1ZMD \| pdb_00001zmd	Download File View File

Crystal Structure of Human dihydrolipoamide dehydrogenase complexed to NADH

Brautigam, C.A., Chuang, J.L., Tomchick, D.R., Machius, M., Chuang, D.T.

(2005) J Mol Biology 350: 543-552

Released	2005-06-28
Method	X-RAY DIFFRACTION 2.08 Å
Organisms	Homo sapiens
Macromolecule	Dihydrolipoyl dehydrogenase (protein)
Unique Ligands	FAD, NAI, SO4

Explore in 3D

2BEU \| pdb_00002beu	Download File View File

Reactivity modulation of human branched-chain alpha-ketoacid dehydrogenase by an internal molecular switch

Machius, M., Wynn, R.M., Chuang, J.L., Tomchick, D.R., Brautigam, C.A., Chuang, D.T.

(2006) Structure 14: 287

Released	2006-02-16
Method	X-RAY DIFFRACTION 1.89 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	2-OXOISOVALERATE DEHYDROGENASE ALPHA SUBUNIT (protein) 2-OXOISOVALERATE DEHYDROGENASE BETA SUBUNIT (protein) PEPTIDE ALA-TYR-ARG (protein)
Unique Ligands	CL, GOL, K, MN, SO4, THV

Explore in 3D

2BEV \| pdb_00002bev	Download File View File

Reactivity modulation of human branched-chain alpha-ketoacid dehydrogenase by an internal molecular switch

Machius, M., Wynn, R.M., Chuang, J.L., Tomchick, D.R., Brautigam, C.A., Chuang, D.T.

(2006) Structure 14: 287

Released	2006-02-16
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	2-OXOISOVALERATE DEHYDROGENASE ALPHA SUBUNIT (protein) 2-OXOISOVALERATE DEHYDROGENASE BETA SUBUNIT (protein) PEPTIDE ALA-TYR-ARG (protein)
Unique Ligands	CL, GOL, K, MN, THY

Explore in 3D

2BEW \| pdb_00002bew	Download File View File

Reactivity modulation of human branched-chain alpha-ketoacid dehydrogenase by an internal molecular switch

Machius, M., Wynn, R.M., Chuang, J.L., Tomchick, D.R., Brautigam, C.A., Chuang, D.T.

(2006) Structure 14: 287

Released	2006-02-16
Method	X-RAY DIFFRACTION 1.79 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	2-OXOISOVALERATE DEHYDROGENASE ALPHA SUBUNIT (protein) 2-OXOISOVALERATE DEHYDROGENASE BETA SUBUNIT (protein) PEPTIDE ALA-TYR-ARG (protein)
Unique Ligands	CL, GOL, K, MN, THW

Explore in 3D

2BFB \| pdb_00002bfb	Download File View File

Reactivity modulation of human branched-chain alpha-ketoacid dehydrogenase by an internal molecular switch

Machius, M., Wynn, R.M., Chuang, J.L., Tomchick, D.R., Brautigam, C.A., Chuang, D.T.

(2006) Structure 14: 287

Released	2006-02-16
Method	X-RAY DIFFRACTION 1.77 Å
Organisms	Homo sapiens
Macromolecule	2-OXOISOVALERATE DEHYDROGENASE ALPHA SUBUNIT (protein) 2-OXOISOVALERATE DEHYDROGENASE BETA SUBUNIT (protein)
Unique Ligands	CL, GOL, K, MN, MRD, TPP

Explore in 3D

2BFC \| pdb_00002bfc	Download File View File

Reactivity modulation of human branched-chain alpha-ketoacid dehydrogenase by an internal molecular switch

Machius, M., Wynn, R.M., Chuang, J.L., Tomchick, D.R., Brautigam, C.A., Chuang, D.T.

(2006) Structure 14: 287

Released	2006-02-16
Method	X-RAY DIFFRACTION 1.64 Å
Organisms	Homo sapiens
Macromolecule	2-OXOISOVALERATE DEHYDROGENASE ALPHA SUBUNIT (protein) 2-OXOISOVALERATE DEHYDROGENASE BETA SUBUNIT (protein)
Unique Ligands	GOL, K, MN, TZD

Explore in 3D

2BFD \| pdb_00002bfd	Download File View File

Reactivity modulation of human branched-chain alpha-ketoacid dehydrogenase by an internal molecular switch

Machius, M., Wynn, R.M., Chuang, J.L., Tomchick, D.R., Brautigam, C.A., Chuang, D.T.

(2006) Structure 14: 287

Released	2006-02-16
Method	X-RAY DIFFRACTION 1.39 Å
Organisms	Homo sapiens
Macromolecule	2-OXOISOVALERATE DEHYDROGENASE ALPHA SUBUNIT (protein) 2-OXOISOVALERATE DEHYDROGENASE BETA SUBUNIT (protein)
Unique Ligands	CL, GOL, K, MN, MPD, TPP

Explore in 3D

2BFE \| pdb_00002bfe	Download File View File

Reactivity modulation of human branched-chain alpha-ketoacid dehydrogenase by an internal molecular switch

Machius, M., Wynn, R.M., Chuang, J.L., Tomchick, D.R., Brautigam, C.A., Chuang, D.T.

(2006) Structure 14: 287

Released	2006-02-16
Method	X-RAY DIFFRACTION 1.69 Å
Organisms	Homo sapiens
Macromolecule	2-OXOISOVALERATE DEHYDROGENASE ALPHA SUBUNIT (protein) 2-OXOISOVALERATE DEHYDROGENASE BETA SUBUNIT (protein)
Unique Ligands	CL, GOL, K, MN, MRD, TPP

Explore in 3D

2BFF \| pdb_00002bff	Download File View File

Reactivity modulation of human branched-chain alpha-ketoacid dehydrogenase by an internal molecular switch

Machius, M., Wynn, R.M., Chuang, J.L., Tomchick, D.R., Brautigam, C.A., Chuang, D.T.

(2006) Structure 14: 287

Released	2006-02-16
Method	X-RAY DIFFRACTION 1.46 Å
Organisms	Homo sapiens
Macromolecule	2-OXOISOVALERATE DEHYDROGENASE ALPHA SUBUNIT (protein) 2-OXOISOVALERATE DEHYDROGENASE BETA SUBUNIT (protein)
Unique Ligands	GOL, K, MN, TZD

Explore in 3D

2CMN \| pdb_00002cmn	Download File View File

A Proximal Arginine Residue in the Switching Mechanism of the FixL Oxygen Sensor

Gilles-Gonzalez, M.-A., Caceres, A.I., Silva Sousa, E.H., Tomchick, D.R., Brautigam, C.A., Gonzalez, C., Machius, M.

(2006) J Mol Biology 360: 80

Released	2007-05-15
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Bradyrhizobium japonicum
Macromolecule	SENSOR PROTEIN FIXL (protein)
Unique Ligands	HEM

Explore in 3D

2F5Z \| pdb_00002f5z	Download File View File

Crystal Structure of Human Dihydrolipoamide Dehydrogenase (E3) Complexed to the E3-Binding Domain of Human E3-Binding Protein

Brautigam, C.A., Chuang, J.L., Wynn, R.M., Tomchick, D.R., Machius, M., Chuang, D.T.

(2006) Structure 14: 611-621

Released	2006-01-17
Method	X-RAY DIFFRACTION 2.18 Å
Organisms	Homo sapiens
Macromolecule	Dihydrolipoyl dehydrogenase (protein) Pyruvate dehydrogenase protein X component (protein)
Unique Ligands	FAD, SO4

Explore in 3D

2F60 \| pdb_00002f60	Download File View File

Crystal Structure of the Dihydrolipoamide Dehydrogenase (E3)-Binding Domain of Human E3-Binding Protein

Brautigam, C.A., Chuang, J.L., Wynn, R.M., Tomchick, D.R., Machius, M., Chuang, D.T.

(2006) Structure 14: 611-621

Released	2006-01-17
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Homo sapiens
Macromolecule	Pyruvate dehydrogenase protein X component (protein)
Unique Ligands	GOL

1 to 25 of 155 Structures

Page 1 of 7

Sort by

About
About Us
Citing Us
Publications
Team
Careers
Usage & Privacy

Support
Contact Us
Help
Website FAQ
Glossary
Service Status

RCSB PDB is hosted by

RCSB PDB is a member of the

RCSB Partners
Nucleic Acid Knowledgebase

wwPDB Partners
RCSB PDB
PDBe
PDBj
BMRB
EMDB

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

Prepare Data

Validate Data

Deposit Data

Help and Resources

Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1KFS | pdb_00001kfs

1KRP | pdb_00001krp

1KSP | pdb_00001ksp

1PK8 | pdb_00001pk8

1PX2 | pdb_00001px2

1QSL | pdb_00001qsl

1U3C | pdb_00001u3c

1U3D | pdb_00001u3d

1WCI | pdb_00001wci

1XF9 | pdb_00001xf9

1XFA | pdb_00001xfa

1XS5 | pdb_00001xs5

1ZMC | pdb_00001zmc

1ZMD | pdb_00001zmd

2BEU | pdb_00002beu

2BEV | pdb_00002bev

2BEW | pdb_00002bew

2BFB | pdb_00002bfb

2BFC | pdb_00002bfc

2BFD | pdb_00002bfd

2BFE | pdb_00002bfe

2BFF | pdb_00002bff

2CMN | pdb_00002cmn

2F5Z | pdb_00002f5z

2F60 | pdb_00002f60