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232,829 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Hayakawa, Y."

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Search Summary

This query matches 11 Structures.

Refinements

Structure Determination Methodology

experimental (11)

Scientific Name of Source Organism

	Mythimna separata (4)
	Chrysodeixis includens (2)
	Embleya scabrispora (2)
	Bombyx mori (1)
	Cotesia kariyai (1)
	Homo sapiens (1)
	Severe acute respiratory syndrome coronavirus 2 (1)

Taxonomy

	Eukaryota (6)
	Eukaryota (eukaryotes) (3)
	Bacteria (2)
	Riboviria (1)

Experimental Method

	SOLUTION NMR (8)
	X-RAY DIFFRACTION (3)

Polymer Entity Type

Protein (11)

Refinement Resolution (Å)

	2.0 - 2.5 (1)
	2.5 - 3.0 (1)
	3.5 - 4.0 (1)

Release Date

	1995 - 1999 (3)
	2000 - 2004 (1)
	2005 - 2009 (4)
	2020 - 2024 (3)

Membrane Protein Annotation

OPM (3)

Symmetry Type

	Asymmetric (9)
	Cyclic (2)

SCOP Classification

	Peptides (6)
	Multi-domain proteins (alpha and beta) (2)
	Artifacts (1)

AllSelected

1 to 11 of 11 Structures

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1B1V	Download File View File

NMR STRUCTURE OF PSP1, PLASMATOCYTE-SPREADING PEPTIDE FROM PSEUDOPLUSIA INCLUDENS

Volkman, B.F., Clark, K.D., Anderson, M.E., Pech, L.L., Markley, J.L., Strand, M.R.

(1999) J Biological Chem 274: 4493-4496

Released	1998-12-02
Method	SOLUTION NMR
Organisms	Chrysodeixis includens
Macromolecule	PROTEIN (PLASMATOCYTE-SPREADING PEPTIDE) (protein)

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1B5N	Download File View File

NMR STRUCTURE OF PSP1, PLASMATOCYTE-SPREADING PEPTIDE FROM PSEUDOPLUSIA INCLUDENS

Volkman, B.F., Clark, K.D., Anderson, M.E., Pech, L.L., Markley, J.L., Strand, M.R.

(1999) J Biological Chem 274: 4493-4496

Released	1999-01-13
Method	SOLUTION NMR
Organisms	Chrysodeixis includens
Macromolecule	PROTEIN (PLASMATOCYTE-SPREADING PEPTIDE) (protein)

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1BQF	Download File View File

GROWTH-BLOCKING PEPTIDE (GBP) FROM PSEUDALETIA SEPARATA

Aizawa, T., Fujitani, N., Hayakawa, Y., Ohnishi, A., Ohkubo, T., Kwano, K., Hikichi, K., Nitta, K.

(1999) J Biological Chem 274: 1887-1890

Released	1998-12-09
Method	SOLUTION NMR
Organisms	Cotesia kariyai
Macromolecule	PROTEIN (GROWTH-BLOCKING PEPTIDE) (protein)

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1IRR	Download File View File

Solution structure of paralytic peptide of the silkworm, Bombyx mori

Miura, K., Kamimura, M., Aizawa, T., Kiuchi, M., Hayakawa, Y., Mizuguchi, M., Kawano, K.

(2002) Peptides 23: 2111-2116

Released	2003-02-11
Method	SOLUTION NMR
Organisms	Bombyx mori
Macromolecule	paralytic peptide (protein)

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2EQH	Download File View File

Solution structure of growth-blocking peptide of the armyworm, Pseudaletia separata

Umetsu, Y., Aizawa, T., Kamiya, M., Kumaki, Y., Demura, M., Kawano, K.

(2009) J Biological Chem 284: 29625-29634

Released	2008-04-01
Method	SOLUTION NMR
Organisms	Mythimna separata
Macromolecule	Growth-blocking peptide, short form (protein)

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2EQQ	Download File View File

Solution structure of growth-blocking peptide of the armyworm, Pseudaletia separata

Umetsu, Y., Aizawa, T., Kamiya, M., Kumaki, Y., Demura, M., Kawano, K.

(2009) J Biological Chem 284: 29625-29634

Released	2008-04-01
Method	SOLUTION NMR
Organisms	Mythimna separata
Macromolecule	Growth-blocking peptide, long form (protein)

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2EQT	Download File View File

Micelle-bound structure of growth-blocking peptide of the armyworm, Pseudaletia separata

Umetsu, Y., Aizawa, T., Kamiya, M., Kumaki, Y., Demura, M., Kawano, K.

(2009) J Biological Chem 284: 29625-29634

Released	2008-04-01
Method	SOLUTION NMR
Organisms	Mythimna separata
Macromolecule	Growth-blocking peptide, long form (protein)

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2RPS	Download File View File

Solution structure of a novel insect chemokine isolated from integument

Kamiya, M., Nakatogawa, S., Oda, Y., Kamijima, T., Aizawa, T., Demura, M., Hayakawa, Y., Kawano, K.

(2009) Curr Biol 19: 779-785

Released	2009-06-16
Method	SOLUTION NMR
Organisms	Mythimna separata
Macromolecule	Chemokine (protein)

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7DQ5	Download File View File

Crystal structure of HitB in complex with (S)-beta-phenylalanine sulfamoyladenosine

Kudo, F., Takahashi, S., Miyanaga, A., Nakazawa, Y., Eguchi, T.

(2021) ACS Chem Biol 16: 539-547

Released	2021-03-03
Method	X-RAY DIFFRACTION 2.45 Å
Organisms	Embleya scabrispora
Macromolecule	Putative ATP-dependent b-aminoacyl-ACP synthetase (protein)
Unique Ligands	8PZ, CA

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7DQ6	Download File View File

Crystal structure of HitB in complex with (S)-beta-3-Br-phenylalanine sulfamoyladenosine

Kudo, F., Takahashi, S., Miyanaga, A., Nakazawa, Y., Eguchi, T.

(2021) ACS Chem Biol 16: 539-547

Released	2021-03-03
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Embleya scabrispora
Macromolecule	Putative ATP-dependent b-aminoacyl-ACP synthetase (protein)
Unique Ligands	CA, HFR

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7X7O	Download File View File

SARS-CoV-2 spike RBD in complex with neutralizing antibody UT28K

Ozawa, T., Tani, H., Anraku, Y., Kita, S., Igarashi, E., Saga, Y., Inasaki, N., Kawasuji, H., Yamada, H., Sasaki, S., Somekawa, M., Sasaki, J., Hayakawa, Y., Yamamoto, Y., Morinaga, Y., Kurosawa, N., Isobe, M., Fukuhara, H., Maenaka, K., Hashiguchi, T., Kishi, H., Kitajima, I., Saito, S., Niimi, H.

(2022) MAbs 14: 2072455-2072455

Released	2022-05-25
Method	X-RAY DIFFRACTION 3.75 Å
Organisms	Homo sapiens Severe acute respiratory syndrome coronavirus 2
Macromolecule	Spike protein S1 (protein) UT28K Fab, heavy chain (protein) UT28K Fab, light chain (protein)