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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Lamzin, V.S."

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Search Summary

This query matches 91 Structures.

Refinements

Structure Determination Methodology

experimental (91)

Scientific Name of Source Organism

	Escherichia coli (10)
	Saccharomyces cerevisiae (9)
	Bos taurus (7)
	Fusarium oxysporum (7)
	Equus caballus (6)
	Kitasatospora aureofaciens (6)
	Gallus gallus (5)
	Hevea brasiliensis (4)
	Trametes hirsuta (4)
	Homo sapiens (3)

More...

Taxonomy

	Eukaryota (56)
	Bacteria (35)

Experimental Method

	X-RAY DIFFRACTION (89)
	SOLUTION NMR (2)

Polymer Entity Type

Protein (91)

Refinement Resolution (Å)

	< 0.5 (1)
	0.5 - 1.0 (5)
	1.0 - 1.5 (37)
	1.5 - 2.0 (30)
	2.0 - 2.5 (13)
	2.5 - 3.0 (3)

Release Date

	1995 - 1999 (18)
	2000 - 2004 (34)
	2005 - 2009 (23)
	2010 - 2014 (6)
	2015 - 2019 (6)
	2020 - 2024 (3)
	2025 - 2029 (1)

Enzyme Classification Name

	Hydrolases (42)
	Oxidoreductases (25)
	Lyases (18)
	Ligases (6)
	Transferases (3)
	Translocases (1)

Symmetry Type

	Asymmetric (58)
	Cyclic (23)
	Dihedral (12)

SCOP Classification

	Alpha and beta proteins (a/b) (17)
	Alpha and beta proteins (a+b) (32)
	All beta proteins (26)
	All alpha proteins (4)
	Artifacts (1)
	Small proteins (1)

AllSelected

1 to 25 of 91 Structures

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1A48 \| pdb_00001a48	Download File View File

SAICAR SYNTHASE

Levdikov, V.M., Melik-Adamyan, W.R., Lamzin, V.S., Wilson, K.S.

(1998) Structure 6: 363-376

Released	1999-03-30
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE SYNTHASE (protein)
Unique Ligands	SO4

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1AFW \| pdb_00001afw	Download File View File

THE 1.8 ANGSTROM CRYSTAL STRUCTURE OF THE DIMERIC PEROXISOMAL THIOLASE OF SACCHAROMYCES CEREVISIAE

Mathieu, M., Wierenga, R.K.

(1997) J Mol Biology 273: 714-728

Released	1997-06-16
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	3-KETOACETYL-COA THIOLASE (protein)
Unique Ligands	MRD

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1B0D \| pdb_00001b0d	Download File View File

Structural effects of monovalent anions on polymorphic lysozyme crystals

Vaney, M.C., Broutin, I., Retailleau, P., Lafont, S., Hamiaux, C., Prange, T., Ries-Kautt, M., Ducruix, A.

(2001) Acta Crystallogr D Biol Crystallogr 57: 929-940

Released	1998-11-11
Method	X-RAY DIFFRACTION 1.84 Å
Organisms	Gallus gallus
Macromolecule	LYSOZYME (protein)
Unique Ligands	TSU

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1B2K \| pdb_00001b2k	Download File View File

Structural effects of monovalent anions on polymorphic lysozyme crystals

Vaney, M.C., Broutin, I., Ries-Kautt, M., Ducruix, A.

(2001) Acta Crystallogr D Biol Crystallogr 57: 929-940

Released	1998-12-02
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Gallus gallus
Macromolecule	PROTEIN (LYSOZYME) (protein)
Unique Ligands	IOD

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1C54 \| pdb_00001c54	Download File View File

SOLUTION STRUCTURE OF RIBONUCLEASE SA

Laurents, D.V., Canadillas-Perez, J.M., Santoro, J., Schell, D., Pace, C.N., Rico, M., Bruix, M.

(2001) Proteins 44: 200-211

Released	2001-11-28
Method	SOLUTION NMR
Organisms	Kitasatospora aureofaciens
Macromolecule	RIBONUCLEASE SA (protein)

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1HET \| pdb_00001het	Download File View File

atomic X-ray structure of liver alcohol dehydrogenase containing a hydroxide adduct to NADH

Meijers, R., Morris, R.J., Adolph, H.W., Merli, A., Lamzin, V.S., Cedergen-Zeppezauer, E.S.

(2001) J Biological Chem 276: 9316

Released	2001-05-31
Method	X-RAY DIFFRACTION 1.15 Å
Organisms	Equus caballus
Macromolecule	ALCOHOL DEHYDROGENASE E CHAIN (protein)
Unique Ligands	MRD, NAD, ZN

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1HEU \| pdb_00001heu	Download File View File

ATOMIC X-RAY STRUCTURE OF LIVER ALCOHOL DEHYDROGENASE CONTAINING Cadmium and a hydroxide adduct to NADH

Meijers, R., Morris, R.J., Adolph, H.W., Merli, A., Lamzin, V.S., Cedergen-Zeppezauer, E.S.

(2001) J Biological Chem 276: 9316

Released	2001-05-31
Method	X-RAY DIFFRACTION 1.15 Å
Organisms	Equus caballus
Macromolecule	ALCOHOL DEHYDROGENASE E CHAIN (protein)
Unique Ligands	CD, MRD, NAD

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1HF3 \| pdb_00001hf3	Download File View File

ATOMIC X-RAY STRUCTURE OF LIVER ALCOHOL DEHYDROGENASE CONTAINING Cadmium and a hydroxide adduct to NADH

Meijers, R., Morris, R.J., Adolph, H.W., Merli, A., Lamzin, V.S., Cedergen-Zeppezauer, E.S.

(2001) J Biological Chem 276: 9316

Released	2001-05-31
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Equus caballus
Macromolecule	ALCOHOL DEHYDROGENASE E CHAIN (protein)
Unique Ligands	CD, MRD, NAD

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1HF4 \| pdb_00001hf4	Download File View File

STRUCTURAL EFFECTS OF MONOVALENT ANIONS ON POLYMORPHIC LYSOZYME CRYSTALS

Vaney, M.C., Broutin, I., Ries-Kautt, M., Ducruix, A.

(2001) Acta Crystallogr D Biol Crystallogr 57: 929

Released	2001-01-07
Method	X-RAY DIFFRACTION 1.45 Å
Organisms	Gallus gallus
Macromolecule	LYSOZYME (protein)
Unique Ligands	NA, NO3

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1I40 \| pdb_00001i40	Download File View File

STRUCTURE OF INORGANIC PYROPHOSPHATASE

Samygina, V.R., Popov, A.N., Lamzin, V.S., Avaeva, S.M.

(2001) J Mol Biology 314: 633-645

Released	2001-12-05
Method	X-RAY DIFFRACTION 1.1 Å
Organisms	Escherichia coli
Macromolecule	INORGANIC PYROPHOSPHATASE (protein)
Unique Ligands	CA, CL, NA

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1I6T \| pdb_00001i6t	Download File View File

STRUCTURE OF INORGANIC PYROPHOSPHATASE

Samygina, V.R., Popov, A.N., Lamzin, V.S., Avaeva, S.M.

(2001) J Mol Biology 314: 633-645

Released	2001-12-05
Method	X-RAY DIFFRACTION 1.2 Å
Organisms	Escherichia coli
Macromolecule	INORGANIC PYROPHOSPHATASE (protein)
Unique Ligands	CA, CL, NA, POP

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1IS9 \| pdb_00001is9	Download File View File

Endoglucanase A from Clostridium thermocellum at atomic resolution

Schmidt, A., Gonzalez, A., Morris, R.J., Costabel, M., Alzari, P.M., Lamzin, V.S.

(2002) Acta Crystallogr D Biol Crystallogr 58: 1433-1441

Released	2002-09-04
Method	X-RAY DIFFRACTION 1.03 Å
Organisms	Acetivibrio thermocellus
Macromolecule	endoglucanase A (protein)
Unique Ligands	CL, HG

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1J49 \| pdb_00001j49	Download File View File

INSIGHTS INTO DOMAIN CLOSURE, SUBSTRATE SPECIFICITY AND CATALYSIS OF D-LACTATE DEHYDROGENASE FROM LACTOBACILLUS BULGARICUS

Razeto, A., Kochhar, S., Hottinger, H., Dauter, M., Wilson, K.S., Lamzin, V.S.

(2002) J Mol Biology 318: 109-119

Released	2002-05-29
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Lactobacillus delbrueckii subsp. bulgaricus
Macromolecule	D-LACTATE DEHYDROGENASE (protein)
Unique Ligands	NAD, SO4

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1J4A \| pdb_00001j4a	Download File View File

INSIGHTS INTO DOMAIN CLOSURE, SUBSTRATE SPECIFICITY AND CATALYSIS OF D-LACTATE DEHYDROGENASE FROM LACTOBACILLUS BULGARICUS

Razeto, A., Kochhar, S., Hottinger, H., Dauter, M., Wilson, K.S., Lamzin, V.S.

(2002) J Mol Biology 318: 109-119

Released	2002-05-29
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Lactobacillus delbrueckii subsp. bulgaricus
Macromolecule	D-LACTATE DEHYDROGENASE (protein)
Unique Ligands	SO4

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1JKU \| pdb_00001jku	Download File View File

Crystal Structure of Manganese Catalase from Lactobacillus plantarum

Barynin, V.V., Whittaker, M.M., Antonyuk, S.V., Lamzin, V.S., Harrison, P.M., Artymiuk, P.J., Whittaker, J.W.

(2001) Structure 9: 725-738

Released	2002-07-13
Method	X-RAY DIFFRACTION 1.84 Å
Organisms	Lactiplantibacillus plantarum
Macromolecule	pseudocatalase (protein)
Unique Ligands	CA, MN3, OH

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1JKV \| pdb_00001jkv	Download File View File

Crystal Structure of Manganese Catalase from Lactobacillus plantarum complexed with azide

Barynin, V.V., Whittaker, M.M., Antonyuk, S.V., Lamzin, V.S., Harrison, P.M., Artymiuk, P.J., Whittaker, J.W.

(2001) Structure 9: 725-738

Released	2002-07-13
Method	X-RAY DIFFRACTION 1.39 Å
Organisms	Lactiplantibacillus plantarum
Macromolecule	pseudocatalase (protein)
Unique Ligands	AZI, CA, EDO, MN3, OH

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1KF2 \| pdb_00001kf2	Download File View File

Atomic Resolution Structure of RNase A at pH 5.2

Berisio, R., Sica, F., Lamzin, V.S., Wilson, K.S., Zagari, A., Mazzarella, L.

(2002) Acta Crystallogr D Biol Crystallogr 58: 441-450

Released	2001-12-19
Method	X-RAY DIFFRACTION 1.1 Å
Organisms	Bos taurus
Macromolecule	pancreatic ribonuclease (protein)
Unique Ligands	SO4

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1KF3 \| pdb_00001kf3	Download File View File

Atomic Resolution Structure of RNase A at pH 5.9

Berisio, R., Sica, F., Lamzin, V.S., Wilson, K.S., Zagari, A., Mazzarella, L.

(2002) Acta Crystallogr D Biol Crystallogr 58: 441-450

Released	2001-12-19
Method	X-RAY DIFFRACTION 1.05 Å
Organisms	Bos taurus
Macromolecule	pancreatic ribonuclease (protein)
Unique Ligands	SO4

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1KF4 \| pdb_00001kf4	Download File View File

Atomic Resolution Structure of RNase A at pH 6.3

Berisio, R., Sica, F., Lamzin, V.S., Wilson, K.S., Zagari, A., Mazzarella, L.

(2002) Acta Crystallogr D Biol Crystallogr 58: 441-450

Released	2001-12-19
Method	X-RAY DIFFRACTION 1.1 Å
Organisms	Bos taurus
Macromolecule	pancreatic ribonuclease (protein)
Unique Ligands	SO4

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1KF5 \| pdb_00001kf5	Download File View File

Atomic Resolution Structure of RNase A at pH 7.1

Berisio, R., Sica, F., Lamzin, V.S., Wilson, K.S., Zagari, A., Mazzarella, L.

(2002) Acta Crystallogr D Biol Crystallogr 58: 441-450

Released	2001-12-19
Method	X-RAY DIFFRACTION 1.15 Å
Organisms	Bos taurus
Macromolecule	pancreatic ribonuclease (protein)

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1KF7 \| pdb_00001kf7	Download File View File

Atomic Resolution Structure of RNase A at pH 8.0

Berisio, R., Sica, F., Lamzin, V.S., Wilson, K.S., Zagari, A., Mazzarella, L.

(2002) Acta Crystallogr D Biol Crystallogr 58: 441-450

Released	2001-12-19
Method	X-RAY DIFFRACTION 1.15 Å
Organisms	Bos taurus
Macromolecule	pancreatic ribonuclease (protein)

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1KF8 \| pdb_00001kf8	Download File View File

Atomic resolution structure of RNase A at pH 8.8

Berisio, R., Sica, F., Lamzin, V.S., Wilson, K.S., Zagari, A., Mazzarella, L.

(2002) Acta Crystallogr D Biol Crystallogr 58: 441-450

Released	2001-12-19
Method	X-RAY DIFFRACTION 1.15 Å
Organisms	Bos taurus
Macromolecule	pancreatic ribonuclease (protein)

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1LNI \| pdb_00001lni	Download File View File

CRYSTAL STRUCTURE ANALYSIS OF A RIBONUCLEASE FROM STREPTOMYCES AUREOFACIENS AT ATOMIC RESOLUTION (1.0 A)

Sevcik, J., Lamzin, V.S., Dauter, Z., Wilson, K.S.

(2002) Acta Crystallogr D Biol Crystallogr 58: 1307-1313

Released	2002-07-31
Method	X-RAY DIFFRACTION 1 Å
Organisms	Kitasatospora aureofaciens
Macromolecule	GUANYL-SPECIFIC RIBONUCLEASE SA (protein)
Unique Ligands	GOL, SO4

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1LTM \| pdb_00001ltm	Download File View File

ACCELERATED X-RAY STRUCTURE ELUCIDATION OF A 36 KDA MURAMIDASE/TRANSGLYCOSYLASE USING WARP

Van Asselt, E.J., Dijkstra, B.W.

(1998) Acta Crystallogr D Biol Crystallogr 54: 58-73

Released	1998-11-11
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Escherichia coli
Macromolecule	36 KDA SOLUBLE LYTIC TRANSGLYCOSYLASE (protein)
Unique Ligands	BCN, EDO, NA

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1M38 \| pdb_00001m38	Download File View File

Structure of Inorganic Pyrophosphatase

Kuranova, I.P., Polyakov, K.M., Levdikov, V.M., Smirnova, E.A., Hohne, W.E., Lamzin, V.S., Meijers, R.

(2003) Crystallogr Rep 48: 953-958

Released	2003-01-28
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	INORGANIC PYROPHOSPHATASE (protein)
Unique Ligands	CO, PO4

1 to 25 of 91 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1A48 | pdb_00001a48

1AFW | pdb_00001afw

1B0D | pdb_00001b0d

1B2K | pdb_00001b2k

1C54 | pdb_00001c54

1HET | pdb_00001het

1HEU | pdb_00001heu

1HF3 | pdb_00001hf3

1HF4 | pdb_00001hf4

1I40 | pdb_00001i40

1I6T | pdb_00001i6t

1IS9 | pdb_00001is9

1J49 | pdb_00001j49

1J4A | pdb_00001j4a

1JKU | pdb_00001jku

1JKV | pdb_00001jkv

1KF2 | pdb_00001kf2

1KF3 | pdb_00001kf3

1KF4 | pdb_00001kf4

1KF5 | pdb_00001kf5

1KF7 | pdb_00001kf7

1KF8 | pdb_00001kf8

1LNI | pdb_00001lni

1LTM | pdb_00001ltm

1M38 | pdb_00001m38