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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Lee, W."

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Search Summary

This query matches 202 Structures.

Refinements

Structure Determination Methodology

experimental (202)

Scientific Name of Source Organism

	Homo sapiens (73)
	Nonlabens marinus S1-08 (26)
	Escherichia coli (9)
	Mus musculus (9)
	Pseudomonas putida (9)
	Streptomyces sp. R61 (8)
	Thermoplasma acidophilum (6)
	Methanothermobacter thermautotrophicus (5)
	Rattus norvegicus (5)
	Bacillus subtilis (4)

More...

Taxonomy

	Eukaryota (102)
	Bacteria (75)
	Archaea (16)
	Riboviria (8)
	Eukaryota (eukaryotes) (3)
	other sequences (2)
	Duplodnaviria (1)
	Riboviria (RNA viruses and viroids) (1)
	Varidnaviria (1)

Experimental Method

	X-RAY DIFFRACTION (126)
	SOLUTION NMR (69)
	ELECTRON MICROSCOPY (6)
	INFRARED SPECTROSCOPY (1)
	SOLUTION SCATTERING (1)

Polymer Entity Type

	Protein (202)
	DNA (7)

Refinement Resolution (Å)

	1.0 - 1.5 (7)
	1.5 - 2.0 (51)
	2.0 - 2.5 (41)
	2.5 - 3.0 (24)
	3.0 - 3.5 (3)
	3.5 - 4.0 (4)
	4.0 - 4.5 (2)

Release Date

	1990 - 1994 (2)
	1995 - 1999 (8)
	2000 - 2004 (45)
	2005 - 2009 (27)
	2010 - 2014 (18)
	2015 - 2019 (37)
	2020 - 2024 (65)

Enzyme Classification Name

	Transferases (34)
	Hydrolases (24)
	Isomerases (16)
	Ligases (5)
	Oxidoreductases (2)
	Translocases (2)

Membrane Protein Annotation

	PDBTM (33)
	mpstruc (27)
	MemProtMD (27)
	OPM (8)

Symmetry Type

	Asymmetric (158)
	Cyclic (35)
	Dihedral (7)
	Icosahedral (4)

SCOP Classification

	Alpha and beta proteins (a+b) (47)
	Alpha and beta proteins (a/b) (15)
	All alpha proteins (20)
	Membrane and cell surface proteins and peptides (31)
	Artifacts (23)
	All beta proteins (12)
	Multi-domain proteins (alpha and beta) (9)
	Peptides (6)
	Small proteins (5)

AllSelected

1 to 25 of 202 Structures

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1AYM \| pdb_00001aym	Download File View File

HUMAN RHINOVIRUS 16 COAT PROTEIN AT HIGH RESOLUTION

Hadfield, A.T., Rossmann, M.G.

(1997) Structure 5: 427-441

Released	1998-01-21
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Human rhinovirus sp.
Macromolecule	HUMAN RHINOVIRUS 16 COAT PROTEIN (protein)
Unique Ligands	DAO, MYR, ZN

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1CO0 \| pdb_00001co0	Download File View File

NMR STUDY OF TRP REPRESSOR-MTR OPERATOR DNA COMPLEX

Zhou, G.P., Brocchieri, L., Jardetzky, O.

(2002) Structures And Mechanisms, Acs Symposium Series 827: 340-366

Released	2003-09-16
Method	SOLUTION NMR
Organisms	Escherichia coli
Macromolecule	TRP OPERON REPRESSOR (protein) 5'-D(TPGPTPAPCPCPAPGPTPAPCPAPCPGPAPGPTPAPCPA)-3' (nucleic acid) 5'-D(TPGPTPAPCPTPCPGPTPGPTPAPCPTPGPGPTPAPCPA)-3' (nucleic acid)
Unique Ligands	TRP

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1CQ0 \| pdb_00001cq0	Download File View File

SOLUTION STRUCTURE OF A HUMAN HYPOCRETIN-2/OREXIN-B'SOLUTION STRUCTURE OF A HUMAN HYPOCRETIN-2/OREXIN-B '

Lee, K.-H., Bang, E.J., Chae, K.-J., Lee, D.W., Lee, W.

(1999) Eur J Biochem 266: 831-839

Released	2000-01-10
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	PROTEIN (NEW HYPOTHALAMIC NEUROPEPTIDE/OREXIN-B28) (protein)

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1DMM \| pdb_00001dmm	Download File View File

CRYSTAL STRUCTURES OF MUTANT ENZYMES Y57F OF KETOSTEROID ISOMERASE FROM PSEUDOMONAS PUTIDA BIOTYPE B

Kim, D.H., Jang, D.S., Nam, G.H., Oh, B.H., Choi, K.Y.

(2000) Biochemistry 39: 4581-4589

Released	2000-05-23
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Pseudomonas putida
Macromolecule	STEROID DELTA-ISOMERASE (protein)

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1DMN \| pdb_00001dmn	Download File View File

CRYSTAL STRUCTURE OF MUTANT ENZYME Y32F/Y57F OF KETOSTEROID ISOMERASE FROM PSEUDOMONAS PUTIDA BIOTYPE B

Kim, D.H., Jang, D.S., Nam, G.H., Oh, B.H., Choi, K.Y.

(2000) Biochemistry 39: 4581-4589

Released	2000-05-23
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Pseudomonas putida
Macromolecule	STEROID DELTA-ISOMERASE (protein)

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1DMQ \| pdb_00001dmq	Download File View File

CRYSTAL STRUCTURE OF MUTANT ENZYME Y32F OF KETOSTEROID ISOMERASE FROM PSEUDOMONAS PUTIDA BIOTYPE B

Kim, D.H., Jang, D.S., Nam, G.H., Oh, B.H., Choi, K.Y.

(2000) Biochemistry 39: 4581-4589

Released	2000-05-23
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Pseudomonas putida
Macromolecule	STEROID DELTA-ISOMERASE (protein)

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1E3R \| pdb_00001e3r	Download File View File

Crystal structure of ketosteroid isomerase mutant D40N (D38N TI numbering) from Pseudomonas putida complexed with androsten-3beta-ol-17-one

Ha, N.-C., Kim, M.-S., Hyun, B.-H., Oh, B.-H.

(2000) J Biological Chem 275: 41100

Released	2001-03-05
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Pseudomonas putida
Macromolecule	ISOMERASE (protein)
Unique Ligands	AND

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1E3V \| pdb_00001e3v	Download File View File

Crystal structure of ketosteroid isomerase from Psedomonas putida complexed with deoxycholate

Ha, N.-C., Kim, M.-S., Kim, J.-S., Oh, B.-H.

(2000) J Biological Chem 275: 41100

Released	2001-03-12
Method	X-RAY DIFFRACTION 2 Å
Organisms	Pseudomonas putida
Macromolecule	STEROID DELTA-ISOMERASE (protein)
Unique Ligands	DXC

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1EJP \| pdb_00001ejp	Download File View File

SOLUTION STRUCTURE OF THE SYNDECAN-4 WHOLE CYTOPLASMIC DOMAIN

Lee, D., Oh, E.S., Woods, A., Couchman, J.R., Lee, W.

(2001) Biochemistry 40: 8471-8478

Released	2001-09-19
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	SYNDECAN-4 (protein)

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1EJQ \| pdb_00001ejq	Download File View File

SOLUTION STRUCTURE OF THE SYNDECAN-4 WHOLE CYTOPLASMIC DOMAIN IN THE PRESENCE OF PHOSPHATIDYLINOSITOL 4,5-BISPHOSPHATE

Shin, J., Oh, E.S., Lee, D., Couchman, J.R., Lee, W.

To be published

Released	2001-03-07
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	SYNDECAN-4 (protein)

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1FUW \| pdb_00001fuw	Download File View File

SOLUTION STRUCTURE AND BACKBONE DYNAMICS OF A DOUBLE MUTANT SINGLE-CHAIN MONELLIN(SCM) DETERMINED BY NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY

Sung, Y.H., Shin, J., Jung, J., Lee, W.

(2001) J Biological Chem 276: 19624-19630

Released	2001-06-06
Method	SOLUTION NMR
Organisms	Dioscoreophyllum cumminsii
Macromolecule	MONELLIN (protein)

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1HVB \| pdb_00001hvb	Download File View File

CRYSTAL STRUCTURE OF STREPTOMYCES R61 DD-PEPTIDASE COMPLEXED WITH A NOVEL CEPHALOSPORIN ANALOG OF CELL WALL PEPTIDOGLYCAN

McDonough, M.A., Lee, W., Silvaggi, N.R., Mobashery, S., Kelly, J.A.

(2001) Proc Natl Acad Sci U S A 98: 1427-1431

Released	2001-02-07
Method	X-RAY DIFFRACTION 1.17 Å
Organisms	Streptomyces sp. R61
Macromolecule	D-ALANYL-D-ALANINE CARBOXYPEPTIDASE (protein)
Unique Ligands	CEH

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1IKG \| pdb_00001ikg	Download File View File

MICHAELIS COMPLEX OF STREPTOMYCES R61 DD-PEPTIDASE WITH A SPECIFIC PEPTIDOGLYCAN SUBSTRATE FRAGMENT

Mcdonough, M.A., Anderson, J.W., Silvaggi, N.R., Pratt, R.F., Knox, J.R., Kelly, J.A.

(2002) J Mol Biology 322: 111-122

Released	2002-09-11
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Streptomyces sp. R61
Macromolecule	D-ALANYL-D-ALANINE CARBOXYPEPTIDASE (protein)
Unique Ligands	REX

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1IKI \| pdb_00001iki	Download File View File

COMPLEX OF STREPTOMYCES R61 DD-PEPTIDASE WITH THE PRODUCTS OF A SPECIFIC PEPTIDOGLYCAN SUBSTRATE FRAGMENT

Mcdonough, M.A., Anderson, J.W., Silvaggi, N.R., Pratt, R.F., Knox, J.R., Kelly, J.A.

(2002) J Mol Biology 322: 111-122

Released	2002-09-11
Method	X-RAY DIFFRACTION 1.25 Å
Organisms	Streptomyces sp. R61
Macromolecule	D-ALANYL-D-ALANINE CARBOXYPEPTIDASE (protein)
Unique Ligands	DAL, REY

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1IQO \| pdb_00001iqo	Download File View File

Solution structure of MTH1880 from methanobacterium thermoautotrophicum

Lee, C.H., Shin, J., Bang, E., Jung, J.W., Yee, A., Arrowsmith, C.H., Lee, W.

(2004) Protein Sci 13: 1148-1154

Released	2002-07-24
Method	SOLUTION NMR
Organisms	Methanothermobacter
Macromolecule	HYPOTHETICAL PROTEIN MTH1880 (protein)

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1IQS \| pdb_00001iqs	Download File View File

Minimized average structure of MTH1880 from Methanobacterium Thermoautotrophicum

Lee, C.H., Shin, J., Bang, E., Jung, J.W., Yee, A., Arrowsmith, C.H., Lee, W.

(2004) Protein Sci 13: 1148-1154

Released	2002-07-29
Method	SOLUTION NMR
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	MTH1880 (protein)

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1JCU \| pdb_00001jcu	Download File View File

Solution Structure of MTH1692 Protein from Methanobacterium thermoautotrophicum

Kozlov, G., Ekiel, I., Gehring, K.

(2002) Proc Natl Acad Sci U S A 99: 1825-1830

Released	2002-07-24
Method	SOLUTION NMR
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	conserved protein MTH1692 (protein)

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1JDQ \| pdb_00001jdq	Download File View File

Solution Structure of TM006 Protein from Thermotoga maritima

Denisov, A.Y., Finak, G., Yee, A., Kozlov, G., Gehring, K., Arrowsmith, C.H.

(2002) Proc Natl Acad Sci U S A 99: 1825-1830

Released	2002-02-27
Method	SOLUTION NMR
Organisms	Thermotoga maritima
Macromolecule	HYPOTHETICAL PROTEIN TM0983 (protein)

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1JE3 \| pdb_00001je3	Download File View File

Solution Structure of EC005 from Escherichia coli

Yee, A., Gutierrez, P., Kozlov, G., Denisov, A., Gehring, K., Arrowsmith, C.

(2002) Proc Natl Acad Sci U S A 99: 1825-1830

Released	2002-03-06
Method	SOLUTION NMR
Organisms	Escherichia coli
Macromolecule	HYPOTHETICAL 8.6 KDA PROTEIN IN AMYA-FLIE INTERGENIC REGION (protein)

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1JJG \| pdb_00001jjg	Download File View File

Solution Structure of Myxoma Virus Protein M156R

Ramelot, T.A., Cort, J.R., Yee, A.A., Arrowsmith, C.H., Kennedy, M.A., Northeast Structural Genomics Consortium (NESG)

(2002) J Mol Biology 322: 943-954

Released	2002-03-06
Method	SOLUTION NMR
Organisms	Myxoma virus (strain Lausanne)
Macromolecule	M156R (protein)

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1JRM \| pdb_00001jrm	Download File View File

NMR structure of MTH0637. Ontario Centre for Structural Proteomics target MTH0637_1_104; Northeast Structural Genomics Target TT135

Pineda-Lucena, A., Northeast Structural Genomics Consortium (NESG)

(2002) Proc Natl Acad Sci U S A 99: 1825-1830

Released	2002-02-27
Method	SOLUTION NMR
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	CONSERVED HYPOTHETICAL PROTEIN mth637 (protein)

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1JW2 \| pdb_00001jw2	Download File View File

SOLUTION STRUCTURE OF HEMOLYSIN EXPRESSION MODULATING PROTEIN Hha FROM ESCHERICHIA COLI. Ontario Centre for Structural Proteomics target EC0308_1_72; Northeast Structural Genomics Target ET88

Chang, X., Yee, A., Savchenko, A., Edwards, A.M., Arrowsmith, C.H., Northeast Structural Genomics Consortium (NESG)

(2002) Proc Natl Acad Sci U S A 99: 1825-1830

Released	2002-02-27
Method	SOLUTION NMR
Organisms	Escherichia coli
Macromolecule	HEMOLYSIN EXPRESSION MODULATING PROTEIN Hha (protein)

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1JW3 \| pdb_00001jw3	Download File View File

Solution Structure of Methanobacterium Thermoautotrophicum Protein 1598. Ontario Centre for Structural Proteomics target MTH1598_1_140; Northeast Structural Genomics Target TT6

Chang, X., Connelly, G., Yee, A., Kennedy, M.A., Edwards, A.M., Arrowsmith, C.H., Northeast Structural Genomics Consortium (NESG)

(2002) Proc Natl Acad Sci U S A 99: 1825-1830

Released	2002-02-27
Method	SOLUTION NMR
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	Conserved Hypothetical Protein MTH1598 (protein)

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1L3X \| pdb_00001l3x	Download File View File

Solution Structure of Novel Disintegrin Salmosin

Shin, J., Lee, W.

(2003) Biochemistry 42: 14408-14415

Released	2003-12-23
Method	SOLUTION NMR
Organisms	Gloydius brevicauda
Macromolecule	platelet aggregation inhibitor disintegrin (protein)

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1MNL \| pdb_00001mnl	Download File View File

HIGH-RESOLUTION SOLUTION STRUCTURE OF A SWEET PROTEIN SINGLE-CHAIN MONELLIN (SCM) DETERMINED BY NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY AND DYNAMICAL SIMULATED ANNEALING CALCULATIONS, 21 STRUCTURES

Lee, S.-Y., Lee, J.-H., Chang, H.-J., Jo, J.-M., Jung, J.-W., Lee, W.

(1999) Biochemistry 38: 2340-2346

Released	1999-06-08
Method	SOLUTION NMR
Organisms	Dioscoreophyllum cumminsii
Macromolecule	MONELLIN (protein)

1 to 25 of 202 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1AYM | pdb_00001aym

1CO0 | pdb_00001co0

1CQ0 | pdb_00001cq0

1DMM | pdb_00001dmm

1DMN | pdb_00001dmn

1DMQ | pdb_00001dmq

1E3R | pdb_00001e3r

1E3V | pdb_00001e3v

1EJP | pdb_00001ejp

1EJQ | pdb_00001ejq

1FUW | pdb_00001fuw

1HVB | pdb_00001hvb

1IKG | pdb_00001ikg

1IKI | pdb_00001iki

1IQO | pdb_00001iqo

1IQS | pdb_00001iqs

1JCU | pdb_00001jcu

1JDQ | pdb_00001jdq

1JE3 | pdb_00001je3

1JJG | pdb_00001jjg

1JRM | pdb_00001jrm

1JW2 | pdb_00001jw2

1JW3 | pdb_00001jw3

1L3X | pdb_00001l3x

1MNL | pdb_00001mnl