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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Liu, J."

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Search Summary

This query matches 45 Structures.

Refinements

Structure Determination Methodology

experimental (45)

Scientific Name of Source Organism

	Homo sapiens (38)
	Severe acute respiratory syndrome coronavirus 2 (5)
	Henipavirus nipahense (4)
	Macaca mulatta (3)
	Mus musculus (2)
	Ebola virus (1)
	Herpesvirus saimiri (strain 11) (1)
	Pseudomonas aeruginosa (1)

Taxonomy

	Eukaryota (43)
	Riboviria (10)
	Bacteria (1)
	Duplodnaviria (1)

Experimental Method

	X-RAY DIFFRACTION (35)
	ELECTRON MICROSCOPY (9)
	SOLUTION NMR (1)

Polymer Entity Type

	Protein (44)
	RNA (1)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (8)
	2.0 - 2.5 (7)
	2.5 - 3.0 (23)
	3.0 - 3.5 (5)

Release Date

	1995 - 1999 (1)
	2005 - 2009 (1)
	2010 - 2014 (4)
	2015 - 2019 (9)
	2020 - 2024 (30)

Enzyme Classification Name

	Hydrolases (18)
	Transferases (6)
	Oxidoreductases (1)

Membrane Protein Annotation

	OPM (2)
	MemProtMD (1)
	PDBTM (1)

Symmetry Type

	Cyclic (26)
	Asymmetric (19)

SCOP Classification

	Alpha and beta proteins (a/b) (5)
	All beta proteins (4)
	All alpha proteins (4)
	Alpha and beta proteins (a+b) (7)
	Artifacts (1)

AllSelected

1 to 25 of 45 Structures

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1FMN \| pdb_00001fmn	Download File View File

SOLUTION STRUCTURE OF FMN-RNA APTAMER COMPLEX, NMR, 5 STRUCTURES

Fan, P., Suri, A.K., Fiala, R., Live, D., Patel, D.J.

(1996) J Mol Biology 258: 480-500

Released	1996-07-11
Method	SOLUTION NMR
Macromolecule	RNA (5'-R(GPGPCPGPUPGPUPAPGPGP APUPAPUPGPCPUPUPCPGPGPCPAPGPAPAPGP GPAPCPAPCPGPCP*C)-3') (nucleic acid)
Unique Ligands	FMN

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3FMZ \| pdb_00003fmz	Download File View File

Crystal Structure of Retinol-Binding Protein 4 (RBP4) in complex with non-retinoid ligand

Wang, Z., Johnstone, S., Walker, N.P.

(2009) J Biological Chem 284: 7673-7680

Released	2009-01-27
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Homo sapiens
Macromolecule	Retinol-binding protein 4 (protein)
Unique Ligands	2T1

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3OQ1 \| pdb_00003oq1	Download File View File

Crystal Structure of 11beta-Hydroxysteroid Dehydrogenase-1 (11b-HSD1) in Complex with Diarylsulfone Inhibitor

Wang, Z., Sudom, A., Walker, N.P.

(2010) Bioorg Med Chem Lett 20: 7071-7075

Released	2011-07-20
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Homo sapiens
Macromolecule	Corticosteroid 11-beta-dehydrogenase isozyme 1 (protein)
Unique Ligands	3OQ, NAP

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4O9S \| pdb_00004o9s	Download File View File

Crystal structure of Retinol-Binding Protein 4 (RBP4)in complex with a non-retinoid ligand

Wang, Z., Johnstone, S., Walker, N.P.

(2014) Bioorg Med Chem Lett 24: 2885-2891

Released	2014-07-02
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	Retinol-binding protein 4 (protein)
Unique Ligands	2RY, CL, EDO, PEG

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4PSQ \| pdb_00004psq	Download File View File

Crystal Structure of Retinol-Binding Protein 4 (RBP4) in complex with a non-retinoid ligand

Wang, Z., Johnstone, S., Walker, N.

(2014) Bioorg Med Chem Lett 24: 2885-2891

Released	2014-07-02
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	Retinol-binding protein 4 (protein)
Unique Ligands	2WL, EDO, PO4

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4TTH \| pdb_00004tth	Download File View File

Crystal structure of a CDK6/Vcyclin complex with inhibitor bound

Piper, D.E., Walker, N., Wang, Z.

(2014) J Med Chem 57: 3430-3449

Released	2014-08-06
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Herpesvirus saimiri (strain 11) Homo sapiens
Macromolecule	Cyclin homolog (protein) Cyclin-dependent kinase 6 (protein)
Unique Ligands	24V

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5EDP \| pdb_00005edp	Download File View File

EGFR kinase (T790M/L858R) apo

Eigenbrot, C., Yu, C.

(2016) Bioorg Med Chem Lett 26: 534-539

Released	2015-12-02
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Homo sapiens
Macromolecule	Epidermal growth factor receptor (protein)

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5EDQ \| pdb_00005edq	Download File View File

EGFR kinase (T790M/L858R) with inhibitor compound 15: ~{N}-(7-chloranyl-1~{H}-indazol-3-yl)-7,7-dimethyl-2-(1~{H}-pyrazol-4-yl)-5~{H}-furo[3,4-d]pyrimidin-4-amine

Eigenbrot, C., Yu, C.

(2016) Bioorg Med Chem Lett 26: 534-539

Released	2015-12-02
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Homo sapiens
Macromolecule	Epidermal growth factor receptor (protein)
Unique Ligands	5N3

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5EDR \| pdb_00005edr	Download File View File

EGFR kinase (T790M/L858R) with inhibitor compound 27: ~{N}-(1~{H}-indazol-3-yl)-7,7-dimethyl-2-(2-methylpyrazol-3-yl)-5~{H}-furo[3,4-d]pyrimidin-4-amine

Eigenbrot, C., Yu, C.

(2016) Bioorg Med Chem Lett 26: 534-539

Released	2015-12-02
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Homo sapiens
Macromolecule	Epidermal growth factor receptor (protein)
Unique Ligands	5N4

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5T1Z \| pdb_00005t1z	Download File View File

Estrogen Receptor Alpha Ligand Binding Domain Y537S Mutant in Complex with Ethoxytriphenylethylene and GRIP Peptide

Fanning, S.W., Rajan, S.S., Maximov, P.Y., Abderrahman, B.H., Surojeet, S., Fernandes, D.J., Fan, P., Curpan, R.F., Greene, G.L., Jordan, V.C.

(2018) Mol Pharmacol 94: 812-822

Released	2017-08-30
Method	X-RAY DIFFRACTION 2.102 Å
Organisms	Homo sapiens
Macromolecule	Estrogen receptor (protein) Nuclear receptor coactivator 2 (protein)
Unique Ligands	Q97

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5W9C \| pdb_00005w9c	Download File View File

Estrogen Receptor Alpha Ligand Binding Domain C381S, C417S, C530S in Complex with 4-hydroxytamoxifen

Fanning, S.W., Greene, G.W.

(2018) Mol Pharmacol 94: 812-822

Released	2018-06-13
Method	X-RAY DIFFRACTION 1.802 Å
Organisms	Homo sapiens
Macromolecule	Estrogen receptor (protein)
Unique Ligands	OHT

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5W9D \| pdb_00005w9d	Download File View File

Estrogen Receptor Alpha Ligand Binding Domain C381S, C417S, C530S Mutant in Complex with Endoxifen

Fanning, S.W., Greene, G.L.

(2018) Mol Pharmacol 94: 812-822

Released	2017-10-11
Method	X-RAY DIFFRACTION 1.6464 Å
Organisms	Homo sapiens
Macromolecule	Estrogen receptor (protein)
Unique Ligands	9XY

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6CBZ \| pdb_00006cbz	Download File View File

Estrogen Receptor Alpha Ligand Binding Domain Y537S Mutant in Complex with Estradiol and GRIP Peptide

Fanning, S.W., Greene, G.L.

(2018) Mol Pharmacol 94: 812-822

Released	2018-02-28
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Homo sapiens
Macromolecule	Estrogen receptor (protein) grip peptide (protein)
Unique Ligands	EST, GOL

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6G4Y \| pdb_00006g4y	Download File View File

Crystal structure of murine NF-kappaB inducing kinase (NIK) in complex with compound 1a

Hole, A.J., Hymowitz, S.G., McEwan, P.A.

(2018) J Med Chem 61: 6801-6813

Released	2018-07-04
Method	X-RAY DIFFRACTION 2.65 Å
Organisms	Mus musculus
Macromolecule	Mitogen-activated protein kinase kinase kinase 14 (protein)
Unique Ligands	ELZ, SO4

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6G4Z \| pdb_00006g4z	Download File View File

Crystal structure of murine NF-kappaB inducing kinase (NIK) in complex with compound 2f

Leonardo-Silvestre, H., McEwan, P.A., Hymowitz, S.G.

(2018) J Med Chem 61: 6801-6813

Released	2018-07-04
Method	X-RAY DIFFRACTION 2.84 Å
Organisms	Mus musculus
Macromolecule	Mitogen-activated protein kinase kinase kinase 14 (protein)
Unique Ligands	ELW

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6US2 \| pdb_00006us2	Download File View File

MTH1 in complex with compound 5

Newby, Z.E.R., Lansdon, E.B.

(2020) ACS Med Chem Lett 11: 358-364

Released	2020-04-01
Method	X-RAY DIFFRACTION 1.80012657096 Å
Organisms	Homo sapiens
Macromolecule	7,8-dihydro-8-oxoguanine triphosphatase (protein)
Unique Ligands	S3O

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6US3 \| pdb_00006us3	Download File View File

MTH1 in complex with compound 4

Newby, Z.E.R., Lansdon, E.B.

(2020) ACS Med Chem Lett 11: 358-364

Released	2020-04-01
Method	X-RAY DIFFRACTION 1.47028917623 Å
Organisms	Homo sapiens
Macromolecule	7,8-dihydro-8-oxoguanine triphosphatase (protein)
Unique Ligands	8JF

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6US4 \| pdb_00006us4	Download File View File

MTH1 in complex with compound 32

Newby, Z.E.R., Lansdon, E.B.

(2020) ACS Med Chem Lett 11: 358-364

Released	2020-04-01
Method	X-RAY DIFFRACTION 1.95032907402 Å
Organisms	Homo sapiens
Macromolecule	7,8-dihydro-8-oxoguanine triphosphatase (protein)
Unique Ligands	GN6

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6V7C \| pdb_00006v7c	Download File View File

Human Arginase1 Complexed with Bicyclic Inhibitor Compound 3

Palte, R.L.

(2020) ACS Med Chem Lett 11: 582-588

Released	2020-05-06
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	Arginase-1 (protein)
Unique Ligands	MN, QR1

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6V7D \| pdb_00006v7d	Download File View File

Human Arginase1 Complexed with Bicyclic Inhibitor Compound 10

Palte, R.L., Lesburg, C.A.

(2020) ACS Med Chem Lett 11: 582-588

Released	2020-05-06
Method	X-RAY DIFFRACTION 1.82 Å
Organisms	Homo sapiens
Macromolecule	Arginase-1 (protein)
Unique Ligands	MN, QR4

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6V7E \| pdb_00006v7e	Download File View File

Human Arginase1 Complexed with Bicyclic Inhibitor Compound 12

Palte, R.L.

(2020) ACS Med Chem Lett 11: 582-588

Released	2020-05-06
Method	X-RAY DIFFRACTION 1.99 Å
Organisms	Homo sapiens
Macromolecule	Arginase-1 (protein)
Unique Ligands	MN, QRA

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6V7F \| pdb_00006v7f	Download File View File

Human Arginase1 Complexed with Bicyclic Inhibitor Compound 13

Palte, R.L., Lesburg, C.A.

(2020) ACS Med Chem Lett 11: 582-588

Released	2020-05-06
Method	X-RAY DIFFRACTION 2.02 Å
Organisms	Homo sapiens
Macromolecule	Arginase-1 (protein)
Unique Ligands	MN, QRJ

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7C2L \| pdb_00007c2l	Download File View File

S protein of SARS-CoV-2 in complex bound with 4A8

Yan, R.H., Zhang, Y.Y., Guo, Y.Y., Li, Y.N., Xia, L., Zhou, Q.

(2020) Science 369: 650-655

Released	2020-07-01
Method	ELECTRON MICROSCOPY 3.1 Å
Organisms	Homo sapiens Severe acute respiratory syndrome coronavirus 2
Macromolecule	Spike glycoprotein (protein) heavy chain of 4A8 (protein) light chain of 4A8 (protein)
Unique Ligands	NAG
Unique branched monosaccharides	NAG

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7JHD \| pdb_00007jhd	Download File View File

Estrogen Receptor Alpha Ligand Binding Domain Y537S in Complex with TTC-352 and GRIP Peptide

Fanning, S.W., Abderraman, B., Maximov, P.Y., Jordan, V.C., Greene, G.L.

(2021) Mol Cancer Ther 20: 11-25

Released	2020-11-25
Method	X-RAY DIFFRACTION 2.402 Å
Organisms	Homo sapiens
Macromolecule	Estrogen receptor (protein) Nuclear receptor coactivator 2 (protein)
Unique Ligands	V9J

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7WWL \| pdb_00007wwl	Download File View File

S protein of Delta variant in complex with ZWD12

Guo, Y.Y., Zhang, Y.Y., Zhou, Q.

(2022) Signal Transduct Target Ther 7: 139-139

Released	2022-06-01
Method	ELECTRON MICROSCOPY 3 Å
Organisms	Homo sapiens Severe acute respiratory syndrome coronavirus 2
Macromolecule	Spike glycoprotein (protein) heavy chain of ZWD12 (protein) light chain of ZWD12 (protein)
Unique Ligands	NAG
Unique branched monosaccharides	NAG

1 to 25 of 45 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1FMN | pdb_00001fmn

3FMZ | pdb_00003fmz

3OQ1 | pdb_00003oq1

4O9S | pdb_00004o9s

4PSQ | pdb_00004psq

4TTH | pdb_00004tth

5EDP | pdb_00005edp

5EDQ | pdb_00005edq

5EDR | pdb_00005edr

5T1Z | pdb_00005t1z

5W9C | pdb_00005w9c

5W9D | pdb_00005w9d

6CBZ | pdb_00006cbz

6G4Y | pdb_00006g4y

6G4Z | pdb_00006g4z

6US2 | pdb_00006us2

6US3 | pdb_00006us3

6US4 | pdb_00006us4

6V7C | pdb_00006v7c

6V7D | pdb_00006v7d

6V7E | pdb_00006v7e

6V7F | pdb_00006v7f

7C2L | pdb_00007c2l

7JHD | pdb_00007jhd

7WWL | pdb_00007wwl