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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "McRee, D.E."

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Search Summary

This query matches 130 Structures.

Refinements

Structure Determination Methodology

experimental (130)

Scientific Name of Source Organism

	Saccharomyces cerevisiae (49)
	Homo sapiens (15)
	Haemophilus influenzae (9)
	Human immunodeficiency virus 1 (9)
	Haliotis rufescens (8)
	Feline immunodeficiency virus (7)
	Aquifex aeolicus (5)
	Azotobacter vinelandii (4)
	Mannheimia haemolytica (3)
	Oryctolagus cuniculus (2)

More...

Taxonomy

	Eukaryota (77)
	Bacteria (36)
	Riboviria (17)
	unclassified sequences (1)

Experimental Method

X-RAY DIFFRACTION (130)

Polymer Entity Type

	Protein (130)
	RNA (1)

Refinement Resolution (Å)

	0.5 - 1.0 (1)
	1.0 - 1.5 (15)
	1.5 - 2.0 (36)
	2.0 - 2.5 (70)
	2.5 - 3.0 (6)
	3.0 - 3.5 (2)

Release Date

	1990 - 1994 (11)
	1995 - 1999 (53)
	2000 - 2004 (43)
	2005 - 2009 (11)
	2010 - 2014 (6)
	2015 - 2019 (6)

Enzyme Classification Name

	Oxidoreductases (57)
	Hydrolases (22)
	Ligases (13)
	Transferases (6)
	Lyases (1)
	Translocases (1)

Membrane Protein Annotation

OPM (1)

Symmetry Type

	Asymmetric (101)
	Cyclic (36)
	Dihedral (2)

SCOP Classification

	All alpha proteins (71)
	All beta proteins (22)
	Alpha and beta proteins (a/b) (26)
	Alpha and beta proteins (a+b) (16)
	Artifacts (9)
	Small proteins (1)

AllSelected

1 to 25 of 130 Structures

Page 1 of 6

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1A2F \| pdb_00001a2f	Download File View File

PROBING THE STRENGTH AND CHARACTER OF AN ASP-HIS-X HYDROGEN BOND BY INTRODUCING BURIED CHARGES

Cao, Y., Goodin, D.B., Mcree, D.E.

To be published

Released	1998-11-25
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	CYTOCHROME C PEROXIDASE (protein)
Unique Ligands	HEM

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1A2G \| pdb_00001a2g	Download File View File

PROBING THE STRENGTH AND CHARACTER OF AN ASP-HIS-X HYDROGEN BOND BY INTRODUCING BURIED CHARGES

Cao, Y., Goodin, D.B., Mcree, D.E.

To be published

Released	1998-11-25
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	CYTOCHROME C PEROXIDASE (protein)
Unique Ligands	HEM

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1AA4 \| pdb_00001aa4	Download File View File

SPECIFICITY OF LIGAND BINDING IN A BURIED POLAR CAVITY OF CYTOCHROME C PEROXIDASE

Musah, R.A., Fitzgerald, M.M., Mcree, D.E., Goodin, D.B.

(1996) Nat Struct Biol 3: 626-631

Released	1997-07-23
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	CYTOCHROME C PEROXIDASE (protein)
Unique Ligands	HEM

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1AC4 \| pdb_00001ac4	Download File View File

VARIATION IN THE STRENGTH OF A CH TO O HYDROGEN BOND IN AN ARTIFICIAL PROTEIN CAVITY (2,3,4-TRIMETHYL-1,3-THIAZOLE)

Musah, R.A., Jensen, G.M., Bunte, S.W., Rosenfeld, R., Mcree, D.E., Goodin, D.B.

(1997) J Am Chem Soc 119: 626-631

Released	1997-09-04
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	CYTOCHROME C PEROXIDASE (protein)
Unique Ligands	HEM, TMT

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1AC8 \| pdb_00001ac8	Download File View File

VARIATION IN THE STRENGTH OF A CH TO O HYDROGEN BOND IN AN ARTIFICIAL PROTEIN CAVITY (3,4,5-TRIMETHYLTHIAZOLE)

Musah, R.A., Jensen, G.M., Bunte, S.W., Rosenfeld, R., Mcree, D.E., Goodin, D.B.

(1997) J Am Chem Soc 119: 626-631

Released	1997-09-04
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	CYTOCHROME C PEROXIDASE (protein)
Unique Ligands	HEM, TMZ

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1AEB \| pdb_00001aeb	Download File View File

SPECIFICITY OF LIGAND BINDING TO A BURIED POLAR CAVITY AT THE ACTIVE SITE OF CYTOCHROME C PEROXIDASE (3-METHYLTHIAZOLE)

Musah, R.A., Jensen, G.M., Fitzgerald, M.M., Mcree, D.E., Goodin, D.B.

(2002) J Mol Biology 315: 845-857

Released	1997-09-04
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	CYTOCHROME C PEROXIDASE (protein)
Unique Ligands	3MT, HEM

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1AED \| pdb_00001aed	Download File View File

SPECIFICITY OF LIGAND BINDING TO A BURIED POLAR CAVITY AT THE ACTIVE SITE OF CYTOCHROME C PEROXIDASE (3,4-DIMETHYLTHIAZOLE)

Musah, R.A., Jensen, G.M., Fitzgerald, M.M., Mcree, D.E., Goodin, D.B.

(2002) J Mol Biology 315: 845-857

Released	1997-09-04
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	CYTOCHROME C PEROXIDASE (protein)
Unique Ligands	DTI, HEM

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1AEE \| pdb_00001aee	Download File View File

SPECIFICITY OF LIGAND BINDING TO A BURIED POLAR CAVITY AT THE ACTIVE SITE OF CYTOCHROME C PEROXIDASE (ANILINE)

Musah, R.A., Jensen, G.M., Fitzgerald, M.M., Mcree, D.E., Goodin, D.B.

(2002) J Mol Biology 315: 845-857

Released	1997-09-04
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	CYTOCHROME C PEROXIDASE (protein)
Unique Ligands	ANL, HEM

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1AEF \| pdb_00001aef	Download File View File

SPECIFICITY OF LIGAND BINDING TO A BURIED POLAR CAVITY AT THE ACTIVE SITE OF CYTOCHROME C PEROXIDASE (3-AMINOPYRIDINE)

Musah, R.A., Jensen, G.M., Fitzgerald, M.M., Mcree, D.E., Goodin, D.B.

(2002) J Mol Biology 315: 845-857

Released	1997-09-04
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	CYTOCHROME C PEROXIDASE (protein)
Unique Ligands	3AP, HEM

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1AEG \| pdb_00001aeg	Download File View File

SPECIFICITY OF LIGAND BINDING TO A BURIED POLAR CAVITY AT THE ACTIVE SITE OF CYTOCHROME C PEROXIDASE (4-AMINOPYRIDINE)

Musah, R.A., Jensen, G.M., Fitzgerald, M.M., Mcree, D.E., Goodin, D.B.

(2002) J Mol Biology 315: 845-857

Released	1997-09-04
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	CYTOCHROME C PEROXIDASE (protein)
Unique Ligands	4AP, HEM

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1AEH \| pdb_00001aeh	Download File View File

SPECIFICITY OF LIGAND BINDING TO A BURIED POLAR CAVITY AT THE ACTIVE SITE OF CYTOCHROME C PEROXIDASE (2-AMINO-4-METHYLTHIAZOLE)

Musah, R.A., Jensen, G.M., Fitzgerald, M.M., Mcree, D.E., Goodin, D.B.

(2002) J Mol Biology 315: 845-857

Released	1997-09-04
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	CYTOCHROME C PEROXIDASE (protein)
Unique Ligands	24T, HEM

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1AEJ \| pdb_00001aej	Download File View File

SPECIFICITY OF LIGAND BINDING TO A BURIED POLAR CAVITY AT THE ACTIVE SITE OF CYTOCHROME C PEROXIDASE (1-VINYLIMIDAZOLE)

Musah, R.A., Jensen, G.M., Fitzgerald, M.M., Mcree, D.E., Goodin, D.B.

(2002) J Mol Biology 315: 845-857

Released	1997-09-04
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	CYTOCHROME C PEROXIDASE (protein)
Unique Ligands	HEM, NVI

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1AEK \| pdb_00001aek	Download File View File

SPECIFICITY OF LIGAND BINDING TO A BURIED POLAR CAVITY AT THE ACTIVE SITE OF CYTOCHROME C PEROXIDASE (INDOLINE)

Musah, R.A., Jensen, G.M., Fitzgerald, M.M., Mcree, D.E., Goodin, D.B.

(2002) J Mol Biology 315: 845-857

Released	1997-09-04
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	CYTOCHROME C PEROXIDASE (protein)
Unique Ligands	HEM, IDM

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1AEM \| pdb_00001aem	Download File View File

SPECIFICITY OF LIGAND BINDING TO A BURIED POLAR CAVITY AT THE ACTIVE SITE OF CYTOCHROME C PEROXIDASE (IMIDAZO[1,2-A]PYRIDINE)

Musah, R.A., Jensen, G.M., Fitzgerald, M.M., Mcree, D.E., Goodin, D.B.

(2002) J Mol Biology 315: 845-857

Released	1997-09-04
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	CYTOCHROME C PEROXIDASE (protein)
Unique Ligands	HEM, MPI

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1AEN \| pdb_00001aen	Download File View File

SPECIFICITY OF LIGAND BINDING TO A BURIED POLAR CAVITY AT THE ACTIVE SITE OF CYTOCHROME C PEROXIDASE (2-AMINO-5-METHYLTHIAZOLE)

Musah, R.A., Jensen, G.M., Bunte, S.W., Rosenfeld, R., Mcree, D.E., Goodin, D.B.

(2002) J Mol Biology 315: 845-857

Released	1997-09-04
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	CYTOCHROME C PEROXIDASE (protein)
Unique Ligands	25T, HEM

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1AEO \| pdb_00001aeo	Download File View File

SPECIFICITY OF LIGAND BINDING TO A BURIED POLAR CAVITY AT THE ACTIVE SITE OF CYTOCHROME C PEROXIDASE (2-AMINOPYRIDINE)

Musah, R.A., Jensen, G.M., Bunte, S.W., Rosenfeld, R., Mcree, D.E., Goodin, D.B.

(2002) J Mol Biology 315: 845-857

Released	1997-09-04
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	CYTOCHROME C PEROXIDASE (protein)
Unique Ligands	2AP, HEM

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1AEQ \| pdb_00001aeq	Download File View File

VARIATION IN THE STRENGTH OF A CH TO O HYDROGEN BOND IN AN ARTIFICIAL PROTEIN CAVITY (2-ETHYLIMIDAZOLE)

Musah, R.A., Jensen, G.M., Bunte, S.W., Rosenfeld, R., Mcree, D.E., Goodin, D.B.

(2002) J Mol Biology 315: 845-857

Released	1997-09-04
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	CYTOCHROME C PEROXIDASE (protein)
Unique Ligands	2EZ, HEM

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1AES \| pdb_00001aes	Download File View File

SPECIFICITY OF LIGAND BINDING TO A BURIED POLAR CAVITY AT THE ACTIVE SITE OF CYTOCHROME C PEROXIDASE (IMIDAZOLE)

Musah, R.A., Jensen, G.M., Fitzgerald, M.M., Mcree, D.E., Goodin, D.B.

(1996) Nat Struct Biol 3: 626-631

Released	1997-09-04
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	CYTOCHROME C PEROXIDASE (protein)
Unique Ligands	HEM, IMD

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1AET \| pdb_00001aet	Download File View File

VARIATION IN THE STRENGTH OF A CH TO O HYDROGEN BOND IN AN ARTIFICIAL PROTEIN CAVITY (1-METHYLIMIDAZOLE)

Musah, R.A., Jensen, G.M., Bunte, S.W., Rosenfeld, R., Mcree, D.E., Goodin, D.B.

(1996) Nat Struct Biol 3: 626-631

Released	1997-09-04
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	CYTOCHROME C PEROXIDASE (protein)
Unique Ligands	1MZ, HEM

Explore in 3D

1AEU \| pdb_00001aeu	Download File View File

SPECIFICITY OF LIGAND BINDING IN A POLAR CAVITY OF CYTOCHROME C PEROXIDASE (2-METHYLIMIDAZOLE)

Musah, R.A., Jensen, G.M., Fitzgerald, M.M., Mcree, D.E., Goodin, D.B.

(1996) Nat Struct Biol 3: 626-631

Released	1997-09-04
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	CYTOCHROME C PEROXIDASE (protein)
Unique Ligands	2MZ, HEM

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1AEV \| pdb_00001aev	Download File View File

INTRODUCTION OF NOVEL SUBSTRATE OXIDATION INTO CYTOCHROME C PEROXIDASE BY CAVITY COMPLEMENTATION: OXIDATION OF 2-AMINOTHIAZOLE AND COVALENT MODIFICATION OF THE ENZYME (2-AMINOTHIAZOLE)

Musah, R.A., Fitzgerald, M.M., Jensen, G.M., Mcree, D.E., Goodin, D.B.

(1997) Biochemistry 36: 11665-11674

Released	1997-09-04
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	CYTOCHROME C PEROXIDASE (protein)
Unique Ligands	AMT, HEM

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1AOP \| pdb_00001aop	Download File View File

SULFITE REDUCTASE STRUCTURE AT 1.6 ANGSTROM RESOLUTION

Crane, B.R., Getzoff, E.D.

(1995) Science 270: 59-67

Released	1997-12-24
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Escherichia coli B
Macromolecule	SULFITE REDUCTASE HEMOPROTEIN (protein)
Unique Ligands	K, PO4, SF4, SRM