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233,249 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Morikawa, S."

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Search Summary

This query matches 17 Structures.

Refinements

Structure Determination Methodology

experimental (17)

Scientific Name of Source Organism

	Mus musculus (10)
	Escherichia coli (4)
	Gymnema sylvestre (2)
	Agrobacterium sp. KNK712 (1)

Taxonomy

	Eukaryota (12)
	Bacteria (5)

Experimental Method

	SOLUTION NMR (16)
	X-RAY DIFFRACTION (1)

Polymer Entity Type

	Protein (17)
	DNA (2)

Refinement Resolution (Å)

1.5 - 2.0 (1)

Release Date

	1995 - 1999 (16)
	2000 - 2004 (1)

Enzyme Classification Name

Hydrolases (1)

Symmetry Type

	Asymmetric (16)
	Dihedral (1)

SCOP Classification

	All alpha proteins (14)
	Alpha and beta proteins (a+b) (1)
	Small proteins (2)

AllSelected

1 to 17 of 17 Structures

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1C4E \| pdb_00001c4e	Download File View File

GURMARIN FROM GYMNEMA SYLVESTRE

Fletcher, J.I., Dingley, A.J., King, G.F.

(1999) Eur J Biochem 264: 525-533

Released	1999-08-27
Method	SOLUTION NMR
Organisms	Gymnema sylvestre
Macromolecule	PROTEIN (GURMARIN) (protein)

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1ERZ \| pdb_00001erz	Download File View File

CRYSTAL STRUCTURE OF N-CARBAMYL-D-AMINO ACID AMIDOHYDROLASE WITH A NOVEL CATALYTIC FRAMEWORK COMMON TO AMIDOHYDROLASES

Nakai, T., Hasegawa, T., Yamashita, E., Yamamoto, M., Kumasaka, T., Ueki, T., Nanba, H., Ikenaka, Y., Takahashi, S., Sato, M., Tsukihara, T.

(2000) Structure 8: 729-737

Released	2001-04-06
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Agrobacterium sp. KNK712
Macromolecule	N-CARBAMYL-D-AMINO ACID AMIDOHYDROLASE (protein)

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1GUR \| pdb_00001gur	Download File View File

GURMARIN, A SWEET TASTE-SUPPRESSING POLYPEPTIDE, NMR, 10 STRUCTURES

Arai, K., Ishima, R., Morikawa, S., Imoto, T., Yoshimura, S., Aimoto, S., Akasaka, K.

(1995) J Biomol NMR 5: 297-305

Released	1996-08-01
Method	SOLUTION NMR
Organisms	Gymnema sylvestre
Macromolecule	GURMARIN (protein)

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1HNR \| pdb_00001hnr	Download File View File

H-NS (DNA-BINDING DOMAIN)

Shindo, H., Iwaki, T., Ieda, R., Kurumizaka, H., Ueguchi, C., Mizuno, T., Morikawa, S., Nakamura, H., Kuboniwa, H.

(1995) FEBS Lett 360: 125-131

Released	1995-07-10
Method	SOLUTION NMR
Organisms	Escherichia coli
Macromolecule	H-NS (protein)

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1HNS \| pdb_00001hns	Download File View File

H-NS (DNA-BINDING DOMAIN)

Shindo, H., Iwaki, T., Ieda, R., Kurumizaka, H., Ueguchi, C., Mizuno, T., Morikawa, S., Nakamura, H., Kuboniwa, H.

(1995) FEBS Lett 360: 125-131

Released	1995-07-10
Method	SOLUTION NMR
Organisms	Escherichia coli
Macromolecule	H-NS (protein)

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1IDY \| pdb_00001idy	Download File View File

STRUCTURE OF MYB TRANSFORMING PROTEIN, NMR, MINIMIZED AVERAGE STRUCTURE

Furukawa, K., Oda, M., Nakamura, H.

(1996) Proc Natl Acad Sci U S A 93: 13583-13588

Released	1996-12-23
Method	SOLUTION NMR
Organisms	Mus musculus
Macromolecule	MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 3 (protein)

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1IDZ \| pdb_00001idz	Download File View File

STRUCTURE OF MYB TRANSFORMING PROTEIN, NMR, 20 STRUCTURES

Furukawa, K., Oda, M., Nakamura, H.

(1996) Proc Natl Acad Sci U S A 93: 13583-13588

Released	1996-12-23
Method	SOLUTION NMR
Organisms	Mus musculus
Macromolecule	MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 3 (protein)

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1MBE \| pdb_00001mbe	Download File View File

MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 1

Ogata, K., Morikawa, S., Nakamura, H., Hojo, H., Yoshimura, S., Zhang, R., Aimoto, S., Ametani, Y., Hirata, Z., Sarai, A., Ishii, S., Nishimura, Y.

(1995) Nat Struct Biol 2: 309-320

Released	1995-07-31
Method	SOLUTION NMR
Organisms	Mus musculus
Macromolecule	MYB PROTO-ONCOGENE PROTEIN (protein)

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1MBF \| pdb_00001mbf	Download File View File

MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 1

Ogata, K., Morikawa, S., Nakamura, H., Hojo, H., Yoshimura, S., Zhang, R., Aimoto, S., Ametani, Y., Hirata, Z., Sarai, A., Ishii, S., Nishimura, Y.

(1995) Nat Struct Biol 2: 309-320

Released	1995-07-31
Method	SOLUTION NMR
Organisms	Mus musculus
Macromolecule	MYB PROTO-ONCOGENE PROTEIN (protein)

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1MBG \| pdb_00001mbg	Download File View File

MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 2

Ogata, K., Morikawa, S., Nakamura, H., Hojo, H., Yoshimura, S., Zhang, R., Aimoto, S., Ametani, Y., Hirata, Z., Sarai, A., Ishii, S., Nishimura, Y.

(1995) Nat Struct Biol 2: 309-320

Released	1995-07-31
Method	SOLUTION NMR
Organisms	Mus musculus
Macromolecule	MYB PROTO-ONCOGENE PROTEIN (protein)

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1MBH \| pdb_00001mbh	Download File View File

MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 2

Ogata, K., Morikawa, S., Nakamura, H., Hojo, H., Yoshimura, S., Zhang, R., Aimoto, S., Ametani, Y., Hirata, Z., Sarai, A., Ishii, S., Nishimura, Y.

(1995) Nat Struct Biol 2: 309-320

Released	1995-09-15
Method	SOLUTION NMR
Organisms	Mus musculus
Macromolecule	C-MYB (protein)

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1MBJ \| pdb_00001mbj	Download File View File

MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 3

Ogata, K., Morikawa, S., Nakamura, H., Hojo, H., Yoshimura, S., Zhang, R., Aimoto, S., Ametani, Y., Hirata, Z., Sarai, A., Ishii, S., Nishimura, Y.

(1995) Nat Struct Biol 2: 309-320

Released	1995-07-31
Method	SOLUTION NMR
Organisms	Mus musculus
Macromolecule	MYB PROTO-ONCOGENE PROTEIN (protein)

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1MBK \| pdb_00001mbk	Download File View File

MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 3

Ogata, K., Morikawa, S., Nakamura, H., Hojo, H., Yoshimura, S., Zhang, R., Aimoto, S., Ametani, Y., Hirata, Z., Sarai, A., Ishii, S., Nishimura, Y.

(1995) Nat Struct Biol 2: 309-320

Released	1995-07-31
Method	SOLUTION NMR
Organisms	Mus musculus
Macromolecule	MYB PROTO-ONCOGENE PROTEIN (protein)

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1MSE \| pdb_00001mse	Download File View File

SOLUTION STRUCTURE OF A SPECIFIC DNA COMPLEX OF THE MYB DNA-BINDING DOMAIN WITH COOPERATIVE RECOGNITION HELICES

Ogata, K., Morikawa, S., Nakamura, H., Sekikawa, A., Inoue, T., Kanai, H., Sarai, A., Ishii, S., Nishimura, Y.

(1994) Cell 79: 639-648

Released	1995-03-31
Method	SOLUTION NMR
Organisms	Mus musculus
Macromolecule	C-Myb DNA-Binding Domain (protein) DNA (5'-D(APTPGPTPGPTPGPTPCPAPGPTPTPAPGPG)-3') (nucleic acid) DNA (5'-D(CPCPTPAPAPCPTPGPAPCPAPCPAPCPAPT)-3') (nucleic acid)

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1MSF \| pdb_00001msf	Download File View File

SOLUTION STRUCTURE OF A SPECIFIC DNA COMPLEX OF THE MYB DNA-BINDING DOMAIN WITH COOPERATIVE RECOGNITION HELICES

Ogata, K., Morikawa, S., Nakamura, H., Sekikawa, A., Inoue, T., Kanai, H., Sarai, A., Ishii, S., Nishimura, Y.

(1994) Cell 79: 639-648

Released	1995-03-31
Method	SOLUTION NMR
Organisms	Mus musculus
Macromolecule	C-Myb DNA-Binding Domain (protein) DNA (5'-D(APTPGPTPGPTPGPTPCPAPGPTPTPAPGPG)-3') (nucleic acid) DNA (5'-D(CPCPTPAPAPCPTPGPAPCPAPCPAPCPAPT)-3') (nucleic acid)

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1PRU \| pdb_00001pru	Download File View File

PURINE REPRESSOR DNA-BINDING DOMAIN DNA BINDING

Nagadoi, A., Morikawa, S., Nakamura, H., Enari, M., Kobayashi, K., Yamamoto, H., Sampei, G., Mizobuchi, K., Schumacher, M.A., Brennan, R.G., Nishimura, Y.

(1995) Structure 3: 1217-1224

Released	1996-03-08
Method	SOLUTION NMR
Organisms	Escherichia coli
Macromolecule	PURINE REPRESSOR (protein)

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1PRV \| pdb_00001prv	Download File View File

PURINE REPRESSOR DNA-BINDING DOMAIN DNA BINDING

Nagadoi, A., Morikawa, S., Nakamura, H., Enari, M., Kobayashi, K., Yamamoto, H., Sampei, G., Mizobuchi, K., Schumacher, M.A., Brennan, R.G., Nishimura, Y.

(1995) Structure 3: 1217-1224

Released	1996-03-08
Method	SOLUTION NMR
Organisms	Escherichia coli
Macromolecule	PURINE REPRESSOR (protein)

1 to 17 of 17 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

1C4E | pdb_00001c4e

GURMARIN FROM GYMNEMA SYLVESTRE

1ERZ | pdb_00001erz

CRYSTAL STRUCTURE OF N-CARBAMYL-D-AMINO ACID AMIDOHYDROLASE WITH A NOVEL CATALYTIC FRAMEWORK COMMON TO AMIDOHYDROLASES

1GUR | pdb_00001gur

GURMARIN, A SWEET TASTE-SUPPRESSING POLYPEPTIDE, NMR, 10 STRUCTURES

1HNR | pdb_00001hnr

H-NS (DNA-BINDING DOMAIN)

1HNS | pdb_00001hns

H-NS (DNA-BINDING DOMAIN)

1IDY | pdb_00001idy

STRUCTURE OF MYB TRANSFORMING PROTEIN, NMR, MINIMIZED AVERAGE STRUCTURE

1IDZ | pdb_00001idz

STRUCTURE OF MYB TRANSFORMING PROTEIN, NMR, 20 STRUCTURES

1MBE | pdb_00001mbe

MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 1

1MBF | pdb_00001mbf

MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 1

1MBG | pdb_00001mbg

MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 2

1MBH | pdb_00001mbh

MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 2

1MBJ | pdb_00001mbj

MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 3

1MBK | pdb_00001mbk

MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 3

1MSE | pdb_00001mse

SOLUTION STRUCTURE OF A SPECIFIC DNA COMPLEX OF THE MYB DNA-BINDING DOMAIN WITH COOPERATIVE RECOGNITION HELICES

1MSF | pdb_00001msf

SOLUTION STRUCTURE OF A SPECIFIC DNA COMPLEX OF THE MYB DNA-BINDING DOMAIN WITH COOPERATIVE RECOGNITION HELICES

1PRU | pdb_00001pru

PURINE REPRESSOR DNA-BINDING DOMAIN DNA BINDING

1PRV | pdb_00001prv

PURINE REPRESSOR DNA-BINDING DOMAIN DNA BINDING

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1C4E | pdb_00001c4e

1ERZ | pdb_00001erz

1GUR | pdb_00001gur

1HNR | pdb_00001hnr

1HNS | pdb_00001hns

1IDY | pdb_00001idy

1IDZ | pdb_00001idz

1MBE | pdb_00001mbe

1MBF | pdb_00001mbf

1MBG | pdb_00001mbg

1MBH | pdb_00001mbh

1MBJ | pdb_00001mbj

1MBK | pdb_00001mbk

1MSE | pdb_00001mse

1MSF | pdb_00001msf

1PRU | pdb_00001pru

1PRV | pdb_00001prv