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232,829 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Nishiuchi, Y."

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Search Summary

This query matches 12 Structures.

Refinements

Structure Determination Methodology

experimental (12)

Scientific Name of Source Organism

	Homo sapiens (3)
	Anemonia sulcata (2)
	Glycine max (2)
	Saimiriine herpesvirus 2 (2)
	Lupinus angustifolius (1)
	Macrothele gigas (1)
	Oryza sativa Japonica Group (1)
	Sus scrofa (1)

Taxonomy

	Eukaryota (5)
	Eukaryota (eukaryotes) (5)
	Duplodnaviria (2)

Experimental Method

	SOLUTION NMR (7)
	X-RAY DIFFRACTION (5)

Polymer Entity Type

Protein (12)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (3)
	2.0 - 2.5 (1)

Release Date

	1995 - 1999 (2)
	2000 - 2004 (2)
	2005 - 2009 (4)
	2010 - 2014 (3)
	2015 - 2019 (1)

Enzyme Classification Name

	Hydrolases (1)
	Ligases (1)
	Transferases (1)

Membrane Protein Annotation

OPM (2)

Symmetry Type

	Asymmetric (8)
	Helical (2)
	Dihedral (2)

SCOP Classification

	All beta proteins (3)
	Small proteins (5)
	Artifacts (1)

AllSelected

1 to 12 of 12 Structures

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1FLE	Download File View File

CRYSTAL STRUCTURE OF ELAFIN COMPLEXED WITH PORCINE PANCREATIC ELASTASE

Tsunemi, M., Matsuura, Y., Sakakibara, S., Katsube, Y.

(1996) Biochemistry 35: 11570-11576

Released	1997-01-11
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens Sus scrofa
Macromolecule	ELAFIN (protein) ELASTASE (protein)

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1JU8	Download File View File

Solution structure of Leginsulin, a plant hormon

Yamazaki, T., Takaoka, M., Katoh, E., Hanada, K., Sakita, M., Sakata, K., Nishiuchi, Y., Hirano, H.

(2003) Eur J Biochem 270: 1269-1276

Released	2003-06-17
Method	SOLUTION NMR
Organisms	Glycine max
Macromolecule	Leginsulin (protein)

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1L3H	Download File View File

NMR structure of P41icf, a potent inhibitor of human cathepsin L

Chiva, C., Barthe, P., Codina, A., Giralt, E.

(2003) J Am Chem Soc 125: 1508-1517

Released	2003-03-04
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	MHC CLASS II-ASSOCIATED P41 INVARIANT CHAIN FRAGMENT (P41icf) (protein)

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1WZB	Download File View File

Crystal structure of the collagen triple helix model [{HYP(R)-HYP(R)-GLY}10]3

Kawahara, K., Nakamura, S., Nishi, Y., Uchiyama, S., Nishiuchi, Y., Nakazawa, T., Ohkubo, T., Kobayashi, Y.

(2005) Biochemistry 44: 15812-15822

Released	2006-01-31
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Saimiriine herpesvirus 2
Macromolecule	Collagen triple helix (protein)

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1Y1B	Download File View File

Solution structure of Anemonia elastase inhibitor

Hemmi, H., Kumazaki, T., Yoshizawa-Kumagaye, K., Nishiuchi, Y., Yoshida, T., Ohkubo, T., Kobayashi, Y.

(2005) Biochemistry 44: 9626-9636

Released	2005-07-19
Method	SOLUTION NMR
Organisms	Anemonia sulcata
Macromolecule	Elastase inhibitor (protein)

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1Y1C	Download File View File

Solution structure of Anemonia elastase inhibitor analogue

Hemmi, H., Kumazaki, T., Yoshizawa-Kumagaye, K., Nishiuchi, Y., Yoshida, T., Ohkubo, T., Kobayashi, Y.

(2005) Biochemistry 44: 9626-9636

Released	2005-07-19
Method	SOLUTION NMR
Organisms	Anemonia sulcata
Macromolecule	Elastase inhibitor (protein)

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2REL	Download File View File

SOLUTION STRUCTURE OF R-ELAFIN, A SPECIFIC INHIBITOR OF ELASTASE, NMR, 11 STRUCTURES

Francart, C., Dauchez, M., Alix, A.J.P., Lippens, G.

(1997) J Mol Biology 268: 666-677

Released	1997-07-07
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	R-ELAFIN (protein)

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2ROO	Download File View File

Solution structure of Magi4, a spider toxin from Macrothele gigas

Yamaji, N.

To be published

Released	2009-04-07
Method	SOLUTION NMR
Organisms	Macrothele gigas
Macromolecule	Neurotoxin magi-4 (protein)

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2RSD	Download File View File

Solution structure of the plant homeodomain (PHD) of the E3 SUMO ligase Siz1 from rice

Shindo, H., Tsuchiya, W., Suzuki, R., Yamazaki, T.

(2012) FEBS Lett 586: 1783-1789

Released	2012-08-15
Method	SOLUTION NMR
Organisms	Oryza sativa Japonica Group
Macromolecule	E3 SUMO-protein ligase SIZ1 (protein)
Unique Ligands	ZN

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3AUP	Download File View File

Crystal structure of Basic 7S globulin from soybean

Yoshizawa, T., Shimizu, T., Taichi, M., Nishiuchi, Y., Yamabe, M., Shichijo, N., Unzai, S., Hirano, H., Sato, M., Hashimoto, H.

(2011) FEBS J 278: 1944-1954

Released	2011-04-27
Method	X-RAY DIFFRACTION 1.91 Å
Organisms	Glycine max
Macromolecule	Basic 7S globulin (protein)

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3B2C	Download File View File

Crystal structure of the collagen triple helix model [{PRO-HYP(R)-GLY}4-{HYP(S)-Pro-GLY}2-{PRO-HYP(R)-GLY}4]3

Motooka, D., Kawahara, K., Nakamura, S., Doi, M., Nishi, Y., Nishiuchi, Y., Nakazawa, T., Yoshida, T., Ohkubo, T., Kobayashi, Y., Kang, Y.K., Uchiyama, S.

(2011) Biopolymers 98: 111-121

Released	2012-04-04
Method	X-RAY DIFFRACTION 1.36 Å
Organisms	Saimiriine herpesvirus 2
Macromolecule	Collagen-like peptide (protein)

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4PPH	Download File View File

Crystal structure of conglutin gamma, a unique basic 7S globulin from lupine seeds

Czubinski, J., Barciszewski, J., Gilski, M., Lampart-Szczapa, E., Jaskolski, M.

(2015) Acta Crystallogr D Biol Crystallogr 71: 224-238

Released	2015-02-11
Method	X-RAY DIFFRACTION 2.009 Å
Organisms	Lupinus angustifolius
Macromolecule	Conglutin gamma (protein)
Unique Ligands	EDO, NAG
Unique branched monosaccharides	FUC, NAG