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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Pluckthun, A."

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Search Summary

This query matches 198 Structures.

Refinements

Structure Determination Methodology

experimental (198)

Scientific Name of Source Organism

	synthetic construct (140)
	Homo sapiens (37)
	Mus musculus (19)
	Aequorea victoria (15)
	Rattus norvegicus (14)
	Bos taurus (10)
	Ovis aries (8)
	Human immunodeficiency virus 1 (7)
	Escherichia coli (5)
	Bifidobacterium longum (4)

More...

Taxonomy

	other sequences (140)
	Eukaryota (102)
	Bacteria (18)
	Duplodnaviria (7)
	Riboviria (7)
	Archaea (5)
	Varidnaviria (3)
	Monodnaviria (2)
	Eukaryota (eukaryotes) (1)

Experimental Method

	X-RAY DIFFRACTION (174)
	ELECTRON MICROSCOPY (17)
	SOLUTION NMR (7)

Polymer Entity Type

Protein (198)

Refinement Resolution (Å)

	1.0 - 1.5 (12)
	1.5 - 2.0 (48)
	2.0 - 2.5 (63)
	2.5 - 3.0 (37)
	3.0 - 3.5 (13)
	3.5 - 4.0 (5)
	4.0 - 4.5 (8)
	> 4.5 (5)

Release Date

	1990 - 1994 (2)
	1995 - 1999 (3)
	2000 - 2004 (12)
	2005 - 2009 (10)
	2010 - 2014 (22)
	2015 - 2019 (80)
	2020 - 2024 (66)
	2025 - 2029 (3)

Enzyme Classification Name

	Hydrolases (19)
	Transferases (8)
	Lyases (7)

Membrane Protein Annotation

	OPM (23)
	PDBTM (16)
	mpstruc (17)
	MemProtMD (14)

Symmetry Type

	Asymmetric (174)
	Cyclic (24)
	Dihedral (1)

SCOP Classification

	All beta proteins (20)
	Alpha and beta proteins (a+b) (12)
	Artifacts (10)
	Alpha and beta proteins (a/b) (4)
	Designed proteins (1)

AllSelected

1 to 25 of 198 Structures

Page 1 of 8

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1C12 \| pdb_00001c12	Download File View File

INSIGHT IN ODORANT PERCEPTION: THE CRYSTAL STRUCTURE AND BINDING CHARACTERISTICS OF ANTIBODY FRAGMENTS DIRECTED AGAINST THE MUSK ODORANT TRASEOLIDE

Langedijk, A.C., Spinelli, S., Anguille, C., Hermans, P., Nederlof, J., Butenandt, J., Honegger, A., Cambillau, C., Pluckthun, A.

(1999) J Mol Biology 292: 855-869

Released	1999-08-14
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Mus musculus
Macromolecule	PROTEIN (ANTIBODY FRAGMENT FAB) (protein)
Unique Ligands	TRZ

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1C5E \| pdb_00001c5e	Download File View File

BACTERIOPHAGE LAMBDA HEAD PROTEIN D

Yang, F., Forrer, P., Dauter, Z., Pluckthun, A., Wlodawer, A.

(2000) Nat Struct Biol 7: 230-237

Released	2000-03-08
Method	X-RAY DIFFRACTION 1.1 Å
Organisms	Lambdavirus lambda
Macromolecule	HEAD DECORATION PROTEIN (protein)
Unique Ligands	GOL

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1FG2 \| pdb_00001fg2	Download File View File

CRYSTAL STRUCTURE OF THE LCMV PEPTIDIC EPITOPE GP33 IN COMPLEX WITH THE MURINE CLASS I MHC MOLECULE H-2DB

Tissot, A.C., Ciatto, C., Mittl, P.R.E., Gruetter, M.G., Plueckthun, A.

(2000) J Mol Biology 302: 873-885

Released	2000-10-04
Method	X-RAY DIFFRACTION 2.754 Å
Organisms	Mus musculus
Macromolecule	BETA-2 MICROGLOBULIN (protein) H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN, D-B ALPHA CHAIN (protein) LCMV PEPTIDIC EPITOPE GP33 (protein)

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1G3P \| pdb_00001g3p	Download File View File

CRYSTAL STRUCTURE OF THE N-TERMINAL DOMAINS OF BACTERIOPHAGE MINOR COAT PROTEIN G3P

Lubkowski, J., Hennecke, F., Pluckthun, A., Wlodawer, A.

(1998) Nat Struct Biol 5: 140-147

Released	1998-01-28
Method	X-RAY DIFFRACTION 1.46 Å
Organisms	Inovirus M13
Macromolecule	MINOR COAT PROTEIN (protein)
Unique Ligands	SO4

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1H8N \| pdb_00001h8n	Download File View File

Three-dimensional structure of anti-ampicillin single chain Fv fragment from phage-displayed murine antibody libraries

Jung, S., Spinelli, S., Schimmele, B., Honegger, A., Pugliese, L., Cambillau, C., Pluckthun, A.

(2001) J Mol Biology 309: 701

Released	2001-08-02
Method	X-RAY DIFFRACTION 1.87 Å
Organisms	Mus musculus
Macromolecule	MUTANT AL2 6E7S9G (protein)
Unique Ligands	GOL, SO4

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1H8O \| pdb_00001h8o	Download File View File

Three-dimensional structure of anti-ampicillin single chain Fv fragment.

Burmester, J., Spinelli, S., Pugliese, L., Krebber, A., Honegger, A., Jung, S., Schimmele, B., Cambillau, C., Pluckthun, A.

(2001) J Mol Biology 309: 671

Released	2001-08-02
Method	X-RAY DIFFRACTION 2.75 Å
Organisms	Mus musculus
Macromolecule	MUTANT AL2 6E7P9G (protein)
Unique Ligands	SO4

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1H8S \| pdb_00001h8s	Download File View File

Three-dimensional structure of anti-ampicillin single chain Fv fragment complexed with the hapten.

Burmester, J., Spinelli, S., Pugliese, L., Krebber, A., Honegger, A., Jung, S., Schimmele, B., Cambillau, C., Pluckthun, A.

(2001) J Mol Biology 309: 671

Released	2001-08-02
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Mus musculus
Macromolecule	MUTANT AL2 6E7P9G (protein)
Unique Ligands	AIC, SO4

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1I3G \| pdb_00001i3g	Download File View File

CRYSTAL STRUCTURE OF AN AMPICILLIN SINGLE CHAIN FV, FORM 1, FREE

Jung, S., Spinelli, S., Schimmele, B., Honegger, A., Pugliese, L., Cambillau, C., Pluckthun, A.

(2001) J Mol Biology 309: 671-685

Released	2001-10-17
Method	X-RAY DIFFRACTION 2.44 Å
Organisms	Mus musculus
Macromolecule	ANTIBODY FV FRAGMENT (protein)
Unique Ligands	MPD

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1IHR \| pdb_00001ihr	Download File View File

Crystal structure of the dimeric C-terminal domain of TonB

Chang, C., Mooser, A., Pluckthun, A., Wlodawer, A.

(2001) J Biological Chem 276: 27535-27540

Released	2001-08-01
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Escherichia coli
Macromolecule	TonB protein (protein)
Unique Ligands	BR

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1JPF \| pdb_00001jpf	Download File View File

Crystal Structure Of The LCMV Peptidic Epitope Gp276 In Complex With The Murine Class I Mhc Molecule H-2Db

Ciatto, C., Tissot, A.C., Tschopp, M., Capitani, G., Pecorari, F., Pluckthun, A., Grutter, M.G.

(2001) J Mol Biology 312: 1059-1071

Released	2001-10-24
Method	X-RAY DIFFRACTION 2.18 Å
Organisms	Mus musculus
Macromolecule	BETA-2-MICROGLOBULIN (protein) H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN, D-B ALPHA CHAIN (protein) LCMV peptidic epitope gp276 (protein)

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1JPG \| pdb_00001jpg	Download File View File

Crystal Structure Of The LCMV Peptidic Epitope Np396 In Complex With The Murine Class I Mhc Molecule H-2Db

Ciatto, C., Tissot, A.C., Tschopp, M., Capitani, G., Pecorari, F., Pluckthun, A., Grutter, M.G.

(2001) J Mol Biology 312: 1059-1071

Released	2001-10-24
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Mus musculus
Macromolecule	BETA-2-MICROGLOBULIN (protein) H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN, D-B ALPHA CHAIN (protein) LCMV peptidic epitope np396 (protein)

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1KP5 \| pdb_00001kp5	Download File View File

Cyclic Green Fluorescent Protein

Hofmann, A., Iwai, H., Plueckthun, A., Wlodawer, A.

(2002) Acta Crystallogr D Biol Crystallogr 58: 1400-1406

Released	2002-08-28
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Aequorea victoria
Macromolecule	Green Fluorescent Protein (protein)
Unique Ligands	SO4

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1KTR \| pdb_00001ktr	Download File View File

Crystal Structure of the Anti-His Tag Antibody 3D5 Single-Chain Fragment (scFv) in Complex with a Oligohistidine peptide

Kaufmann, M., Lindner, P., Honegger, A., Blank, K., Tschopp, M., Capitani, G., Plueckthun, A., Gruetter, M.G.

(2002) J Mol Biology 318: 135-147

Released	2002-05-15
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Mus musculus synthetic construct
Macromolecule	Anti-his tag antibody 3d5 variable light chain, Peptide linker, Anti-his tag antibody 3d5 variable heavy chain (protein) Oligohistidine peptide Antigen (protein)

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1P4I \| pdb_00001p4i	Download File View File

Crystal Structure of scFv against peptide GCN4

Zahnd, C., Spinelli, S., Luginbuhl, B., Jermutus, L., Amstutz, P., Cambillau, C., Pluckthun, A.

(2004) J Biological Chem 279: 18870-18877

Released	2004-05-04
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Mus musculus
Macromolecule	ANTIBODY VARIABLE LIGHT CHAIN (protein) antibody variable heavy chain (protein)

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1TOL \| pdb_00001tol	Download File View File

FUSION OF N-TERMINAL DOMAIN OF THE MINOR COAT PROTEIN FROM GENE III IN PHAGE M13, AND C-TERMINAL DOMAIN OF E. COLI PROTEIN-TOLA

Lubkowski, J., Wlodawer, A., Hennecke, F., Plueckthun, A.

(1999) Structure 7: 711-722

Released	1999-05-20
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Escherichia coli Inovirus M13
Macromolecule	PROTEIN (FUSION PROTEIN CONSISTING OF MINOR COAT PROTEIN, GLYCINE RICH LINKER, TOLA, AND A HIS TAG) (protein)

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1VD0 \| pdb_00001vd0	Download File View File

Capsid stabilizing protein GPD, NMR, 20 Structures

Iwai, H., Forrer, P., Pluckthun, A., Guntert, P., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

(2005) J Biomol NMR 31: 351-356

Released	2005-03-29
Method	SOLUTION NMR
Organisms	Lambdavirus lambda
Macromolecule	Head decoration protein (protein)

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2A9M \| pdb_00002a9m	Download File View File

Structural Analysis of a Tight-binding Fluorescein-scFv; apo form

Cambillau, C., Spinelli, S., Honegger, A., Pluckthun, A.

(2005) Protein Sci 14: 2537-2549

Released	2005-10-25
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens
Macromolecule	fluorescein-scfv (protein)

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2A9N \| pdb_00002a9n	Download File View File

A Mutation Designed to Alter Crystal Packing Permits Structural Analysis of a Tight-binding Fluorescein-scFv complex

Cambillau, C., Spinelli, S., Honegger, A., Pluckthun, A.

(2005) Protein Sci 14: 2537-2549

Released	2005-10-25
Method	X-RAY DIFFRACTION 3 Å
Organisms	Homo sapiens
Macromolecule	fluorescein-scfv (protein)
Unique Ligands	ORE

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2BKG \| pdb_00002bkg	Download File View File

Crystal structure of E3_19 a designed ankyrin repeat protein

Binz, H.K., Kohl, A., Pluckthun, A., Grutter, M.G.

(2006) Proteins 65: 280

Released	2006-06-21
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	synthetic construct
Macromolecule	SYNTHETIC CONSTRUCT ANKYRIN REPEAT PROTEIN E3_19 (protein)

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2BKK \| pdb_00002bkk	Download File View File

Crystal structure of Aminoglycoside Phosphotransferase APH(3')-IIIa in complex with the inhibitor AR_3a

Kohl, A., Amstutz, P., Parizek, P., Binz, H.K., Briand, C., Capitani, G., Forrer, P., Pluckthun, A., Grutter, M.G.

(2005) Structure 13: 1131

Released	2005-08-09
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Enterococcus faecalis synthetic construct
Macromolecule	AMINOGLYCOSIDE 3'-PHOSPHOTRANSFERASE (protein) DESIGNED ANKYRIN REPEAT INHIBITOR AR_3A (protein)
Unique Ligands	ADP, MG

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2HH0 \| pdb_00002hh0	Download File View File

Structure of an Anti-PrP Fab, P-Clone, in Complex with its Cognate Bovine Peptide Epitope.

Kanyo, Z.K.

(2006) J Mol Biology 363: 75-97

Released	2006-12-26
Method	X-RAY DIFFRACTION 2.85 Å
Organisms	Bos taurus Homo sapiens Mus musculus
Macromolecule	Heavy Chain, P-Clone Fab, Chimera (protein) Light Chain, P-Clone Fab, Chimera (protein) Prion protein (protein)