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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Smith, G.P."

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Search Summary

This query matches 138 Structures.

Refinements

Structure Determination Methodology

experimental (138)

Scientific Name of Source Organism

	Homo sapiens (21)
	synthetic construct (17)
	Bacillus subtilis (11)
	Escherichia phage T5 (8)
	Influenza A virus (7)
	Orthobunyavirus lacrosseense (7)
	La Crosse virus (6)
	Mus musculus (6)
	Human adenovirus 2 (5)
	Human adenovirus B3 (5)

More...

Taxonomy

	Eukaryota (49)
	Bacteria (30)
	Riboviria (30)
	Varidnaviria (18)
	other sequences (17)
	Duplodnaviria (16)
	Archaea (7)
	Monodnaviria (1)

Experimental Method

	ELECTRON MICROSCOPY (93)
	X-RAY DIFFRACTION (41)
	ELECTRON CRYSTALLOGRAPHY (4)
	SOLUTION NMR (2)
	SOLID-STATE NMR (1)

Polymer Entity Type

	Protein (138)
	RNA (26)
	DNA (4)

Refinement Resolution (Å)

	1.0 - 1.5 (3)
	1.5 - 2.0 (7)
	2.0 - 2.5 (13)
	2.5 - 3.0 (16)
	3.0 - 3.5 (37)
	3.5 - 4.0 (29)
	4.0 - 4.5 (16)
	> 4.5 (17)

Release Date

	2000 - 2004 (7)
	2005 - 2009 (13)
	2010 - 2014 (11)
	2015 - 2019 (28)
	2020 - 2024 (65)
	2025 - 2029 (14)

Enzyme Classification Name

	Hydrolases (25)
	Transferases (16)
	Translocases (12)
	Oxidoreductases (3)
	Ligases (1)
	Lyases (1)

Membrane Protein Annotation

	PDBTM (28)
	mpstruc (20)
	MemProtMD (17)
	OPM (14)

Symmetry Type

	Asymmetric (50)
	Cyclic (57)
	Helical (11)
	Icosahedral (9)
	Tetrahedral (6)
	Dihedral (5)

SCOP Classification

	All beta proteins (9)
	Artifacts (1)
	Alpha and beta proteins (a/b) (3)
	All alpha proteins (3)
	Low resolution protein structures (1)
	Alpha and beta proteins (a+b) (1)

AllSelected

1 to 25 of 138 Structures

Page 1 of 6

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1H7Z \| pdb_00001h7z	Download File View File

Adenovirus Ad3 fibre head

Durmort, C., Stehlin, C., Schoehn, G., Mitraki, A., Drouet, E., Cusack, S., Burmeister, W.P.

(2001) Virology 285: 302

Released	2001-07-19
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Human adenovirus B3
Macromolecule	ADENOVIRUS FIBRE PROTEIN (protein)
Unique Ligands	SO4

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1O6E \| pdb_00001o6e	Download File View File

Epstein-Barr virus protease

Buisson, M., Hernandez, J., Lascoux, D., Schoehn, G., Forest, E., Arlaud, G., Seigneurin, J., Ruigrok, R.W.H., Burmeister, W.P.

(2002) J Mol Biology 324: 89

Released	2002-11-14
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	human gammaherpesvirus 4
Macromolecule	CAPSID PROTEIN P40 (protein)
Unique Ligands	ISP

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1O7D \| pdb_00001o7d	Download File View File

The structure of the bovine lysosomal a-mannosidase suggests a novel mechanism for low pH activation

Heikinheimo, P., Helland, R., Leiros, H.S., Leiros, I., Karlsen, S., Evjen, G., Ravelli, R., Schoehn, G., Ruigrok, R., Tollersrud, O.-K., Mcsweeney, S., Hough, E.

(2003) J Mol Biology 327: 631

Released	2003-03-20
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Bos taurus
Macromolecule	Lysosomal alpha-mannosidase (protein)
Unique Ligands	NAG, SO4, TRS, ZN
Unique branched monosaccharides	BMA, MAN, NAG

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1OCY \| pdb_00001ocy	Download File View File

Structure of the receptor-binding domain of the bacteriophage T4 short tail fibre

Thomassen, E., Gielen, G., Schuetz, M., Miller, S., van Raaij, M.J.

(2003) J Mol Biology 331: 361-373

Released	2003-07-24
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Tequatrovirus T4
Macromolecule	BACTERIOPHAGE T4 SHORT TAIL FIBRE (protein)
Unique Ligands	CIT, SO4, ZN

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1PDI \| pdb_00001pdi	Download File View File

Fitting of the C-terminal part of the short tail fibers into the cryo-EM reconstruction of T4 baseplate

Kostyuchenko, V.A., Leiman, P.G., Chipman, P.R., Kanamaru, S., van Raaij, M.J., Arisaka, F., Mesyanzhinov, V.V., Rossmann, M.G.

(2003) Nat Struct Biol 10: 688-693

Released	2003-09-09
Method	ELECTRON MICROSCOPY 12 Å
Organisms	Tequatrovirus T4
Macromolecule	Short tail fiber protein (protein)

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1T3E \| pdb_00001t3e	Download File View File

Structural basis of dynamic glycine receptor clustering

Sola, M., Bavro, V.N., Timmins, J., Franz, T., Ricard-Blum, S., Schoehn, G., Ruigrok, R.W.H., Paarmann, I., Saiyed, T., O'Sullivan, G.A.

(2004) EMBO J 23: 2510-2519

Released	2004-07-27
Method	X-RAY DIFFRACTION 3.25 Å
Organisms	Rattus norvegicus
Macromolecule	49-mer fragment of Glycine receptor beta chain (protein) Gephyrin (protein)
Unique Ligands	SO4

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1W9C \| pdb_00001w9c	Download File View File

Proteolytic fragment of CRM1 spanning six C-terminal HEAT repeats

Petosa, C., Schoehn, G., Askjaer, P., Bauer, U., Moulin, M., Steuerwald, U., Soler-Lopez, M., Baudin, F., Mattaj, I.W., Muller, C.W.

(2004) Mol Cell 16: 761

Released	2004-12-03
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	CRM1 PROTEIN (protein)

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1X9P \| pdb_00001x9p	Download File View File

The crystal structure of human adenovirus 2 penton base

Zubieta, C., Schoehn, G., Chroboczek, J., Cusack, S.

(2005) Mol Cell 17: 121-135

Released	2005-01-18
Method	X-RAY DIFFRACTION 3.3 Å
Organisms	Human adenovirus 2
Macromolecule	Penton protein (protein)
Unique Ligands	C15, SO4

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1X9T \| pdb_00001x9t	Download File View File

The crystal structure of human adenovirus 2 penton base in complex with an ad2 N-terminal fibre peptide

Zubieta, C., Schoehn, G., Chroboczek, J., Cusack, S.

(2005) Mol Cell 17: 121-135

Released	2005-01-18
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Human adenovirus 2 Human adenovirus C serotype 2
Macromolecule	N-terminal peptide of Fiber protein (protein) Penton protein (protein)
Unique Ligands	C15

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2C9F \| pdb_00002c9f	Download File View File

THE QUASI-ATOMIC MODEL OF THE ADENOVIRUS TYPE 3 PENTON DODECAHEDRON

Fuschiotti, P., Schoehn, G., Fender, P., Fabry, C.M.S., Hewat, E.A., Chroboczek, J., Ruigrok, R.W.H., Conway, J.F.

(2006) J Mol Biology 356: 510

Released	2006-03-02
Method	ELECTRON MICROSCOPY 16.5 Å
Organisms	Human adenovirus 2
Macromolecule	FIBER (protein) PENTON PROTEIN (protein)

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2C9G \| pdb_00002c9g	Download File View File

THE QUASI-ATOMIC MODEL OF THE ADENOVIRUS TYPE 3 PENTON BASE DODECAHEDRON

Fuschiotti, P., Schoehn, G., Fender, P., Fabry, C.M.S., Hewat, E.A., Chroboczek, J., Ruigrok, R.W.H., Conway, J.F.

(2006) J Mol Biology 356: 510

Released	2006-01-04
Method	ELECTRON MICROSCOPY 9.3 Å
Organisms	Human adenovirus 2
Macromolecule	PENTON PROTEIN (protein)

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2CF4 \| pdb_00002cf4	Download File View File

Pyrococcus horikoshii TET1 peptidase can assemble into a tetrahedron or a large octahedral shell

Vellieux, F.M.D., Schoehn, G., Dura, M.A., Roussel, A., Franzetti, B.

(2006) J Biological Chem 281: 36327

Released	2006-09-14
Method	X-RAY DIFFRACTION 3.08 Å
Organisms	Pyrococcus horikoshii OT3
Macromolecule	PROTEIN PH0519 (protein)
Unique Ligands	CO

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2GTT \| pdb_00002gtt	Download File View File

Crystal structure of the rabies virus nucleoprotein-RNA complex

Albertini, A.A.V., Wernimont, A.K., Muziol, T., Ravelli, R.B.G., Weissenhorn, W., Ruigrok, R.W.H.

(2006) Science 313: 360-363

Released	2006-09-19
Method	X-RAY DIFFRACTION 3.49 Å
Organisms	Lyssavirus rabies synthetic construct
Macromolecule	Nucleoprotein (protein) RNA (99-MER) (nucleic acid)
Unique Ligands	PO4

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2VAK \| pdb_00002vak	Download File View File

Crystal structure of the avian reovirus inner capsid protein sigmaA

Guardado-Calvo, P., Llamas-Saiz, A.L., Fox, G.C., Hermo-Parrado, X.L., Vazquez-Iglesias, L., Martinez-Costas, J., Benavente, J., van Raaij, M.J.

(2008) J Virol 82: 11208-11216

Released	2008-09-09
Method	X-RAY DIFFRACTION 2.34 Å
Organisms	Avian orthoreovirus
Macromolecule	SIGMA A (protein)
Unique Ligands	SO4

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2VTW \| pdb_00002vtw	Download File View File

Structure of the C-terminal head domain of the fowl adenovirus type 1 short fibre

ElBakkouri, M., Seiradake, E., Cusack, S., Ruigrok, R.W.H., Schoehn, G.

(2008) Virology 378: 169

Released	2008-06-17
Method	X-RAY DIFFRACTION 2 Å
Organisms	Fowl aviadenovirus 1
Macromolecule	FIBER PROTEIN 2 (protein)
Unique Ligands	GOL, SO4

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2W1J \| pdb_00002w1j	Download File View File

CRYSTAL STRUCTURE OF SORTASE C-1 (SRTC-1) from Streptococcus pneumoniae

Manzano, C., Contreras-Martel, C., El Mortaji, L., Izore, T., Fenel, D., Vernet, T., Schoehn, G., Di Guilmi, A.M., Dessen, A.

(2008) Structure 16: 1838

Released	2008-12-23
Method	X-RAY DIFFRACTION 1.24 Å
Organisms	Streptococcus pneumoniae TIGR4
Macromolecule	PUTATIVE SORTASE (protein)
Unique Ligands	GOL

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2W1K \| pdb_00002w1k	Download File View File

Crystal Structure of Sortase C-3 (SRTC-3) from Streptococcus pneumoniae

Manzano, C., Contreras-Martel, C., El Mortaji, L., Izore, T., Fenel, D., Vernet, T., Schoehn, G., Di Guilmi, A.M., Dessen, A.

(2008) Structure 16: 1838

Released	2008-12-23
Method	X-RAY DIFFRACTION 2.14 Å
Organisms	Streptococcus pneumoniae TIGR4
Macromolecule	PUTATIVE SORTASE (protein)
Unique Ligands	MES

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2W9L \| pdb_00002w9l	Download File View File

CANINE ADENOVIRUS TYPE 2 FIBRE HEAD IN COMPLEX WITH CAR DOMAIN D1 AND SIALIC ACID

Seiradake, E., Henaff, D., Wodrich, H., Billet, O., Perreau, M., Hippert, C., Mennechet, F., Schoehn, G., Lortat-Jacob, H., Dreja, H., Ibanes, S., Kalatzis, V., Wang, J.P., Finberg, R.W., Cusack, S., Kremer, E.J.

(2009) PLoS Pathog 5: e1000277-e1000277

Released	2009-03-17
Method	X-RAY DIFFRACTION 2.91 Å
Organisms	Canine adenovirus 2 Homo sapiens
Macromolecule	COXSACKIEVIRUS AND ADENOVIRUS RECEPTOR (protein) FIBRE PROTEIN (protein)
Unique branched monosaccharides	GAL, GL0, SIA

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2WBV \| pdb_00002wbv	Download File View File

Canine adenovirus 2 fibre head in complex with sialic acid

(2009) PLoS Pathog 5: 00277

Released	2009-03-17
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Canine adenovirus 2
Macromolecule	FIBER PROTEIN (protein)
Unique Ligands	GOL, SIA
Unique branched monosaccharides	GAL, SIA

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2WBW \| pdb_00002wbw	Download File View File

Ad37 fibre head in complex with CAR D1 and sialic acid

(2009) PLoS Pathog 5: 00277

Released	2009-03-17
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Homo sapiens Human adenovirus D37
Macromolecule	COXSACKIEVIRUS AND ADENOVIRUS RECEPTOR (protein) FIBER PROTEIN (protein)
Unique Ligands	CA, SIA

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2WYR \| pdb_00002wyr	Download File View File

3-D structure of PhTET1-12s, dodecamer in the asymmetric unit

Vellieux, F.M.D., Dura, M.A., Franzetti, B.

To be published

Released	2010-12-01
Method	X-RAY DIFFRACTION 2.245 Å
Organisms	Pyrococcus horikoshii OT3
Macromolecule	COBALT-ACTIVATED PEPTIDASE TET1 (protein)
Unique Ligands	CO

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2WZN \| pdb_00002wzn	Download File View File

3d structure of TET3 from Pyrococcus horikoshii

Rosenbaum, E., Dura, M.A., Vellieux, F.M., Franzetti, B.

(2009) Mol Microbiol 72: 26

Released	2010-11-03
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Pyrococcus horikoshii
Macromolecule	354AA LONG HYPOTHETICAL OPERON PROTEIN FRV (protein)
Unique Ligands	CL, GOL, ZN