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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Suzuki, S."

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Search Summary

This query matches 230 Structures.

Refinements

Structure Determination Methodology

experimental (230)

Scientific Name of Source Organism

	Homo sapiens (96)
	Trypanosoma cruzi strain CL Brener (49)
	Mus musculus (20)
	Escherichia coli (15)
	Severe acute respiratory syndrome coronavirus 2 (11)
	synthetic construct (11)
	Ricinus communis (10)
	Rattus norvegicus (6)
	Arthrobacter globiformis (5)
	Niallia circulans (5)

More...

Taxonomy

	Eukaryota (174)
	Bacteria (61)
	Riboviria (11)
	other sequences (11)
	Archaea (2)

Experimental Method

	X-RAY DIFFRACTION (123)
	SOLUTION NMR (74)
	ELECTRON MICROSCOPY (33)

Polymer Entity Type

Protein (230)

Refinement Resolution (Å)

	1.0 - 1.5 (18)
	1.5 - 2.0 (59)
	2.0 - 2.5 (36)
	2.5 - 3.0 (24)
	3.0 - 3.5 (18)
	3.5 - 4.0 (1)

Release Date

	1990 - 1994 (1)
	1995 - 1999 (6)
	2000 - 2004 (23)
	2005 - 2009 (69)
	2010 - 2014 (65)
	2015 - 2019 (7)
	2020 - 2024 (43)
	2025 - 2029 (16)

Enzyme Classification Name

	Oxidoreductases (61)
	Hydrolases (43)
	Transferases (15)
	Lyases (4)
	Ligases (2)

Membrane Protein Annotation

	PDBTM (13)
	mpstruc (11)
	MemProtMD (7)
	OPM (7)

Symmetry Type

	Asymmetric (148)
	Cyclic (89)
	Dihedral (2)

SCOP Classification

	Artifacts (58)
	Alpha and beta proteins (a/b) (53)
	All beta proteins (33)
	Alpha and beta proteins (a+b) (25)
	All alpha proteins (22)
	Small proteins (17)

AllSelected

1 to 25 of 230 Structures

Page 1 of 10

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1BQ5 \| pdb_00001bq5	Download File View File

NITRITE REDUCTASE FROM ALCALIGENES XYLOSOXIDANS GIFU 1051

Inoue, T., Gotowda, M., Deligeer, Suzuki, S., Kataoka, K., Yamaguchi, K., Watanabe, H., Goho, M., Yasushi, K.A.I.

(1998) J Biochem 124: 876-879

Released	1999-08-21
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Achromobacter xylosoxidans
Macromolecule	NITRITE REDUCTASE (protein)
Unique Ligands	CU

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1BQK \| pdb_00001bqk	Download File View File

OXIDIZED PSEUDOAZURIN

Inoue, T., Nishio, N., Hamanaka, S., Shimomura, T., Harada, S., Suzuki, S., Kohzuma, T., Shidara, S., Iwasaki, H., Kai, Y.

(1999) J Biological Chem 274: 17845-17852

Released	1999-08-17
Method	X-RAY DIFFRACTION 1.35 Å
Organisms	Achromobacter cycloclastes
Macromolecule	PSEUDOAZURIN (protein)
Unique Ligands	CU

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1BQR \| pdb_00001bqr	Download File View File

REDUCED PSEUDOAZURIN

Inoue, T., Nishio, N., Hamanaka, S., Shimomura, T., Harada, S., Suzuki, S., Kohzuma, T., Shidara, S., Iwasaki, H., Kai, Y.

(1999) J Biological Chem 274: 17845-17852

Released	1999-08-17
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Achromobacter cycloclastes
Macromolecule	PSEUDOAZURIN (protein)
Unique Ligands	CU

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1CUO \| pdb_00001cuo	Download File View File

CRYSTAL STRUCTURE ANALYSIS OF ISOMER-2 AZURIN FROM METHYLOMONAS J

Inoue, T., Nishio, N., Kai, Y., Suzuki, S., Kataoka, K.

(2003) J Mol Biology 333: 117-124

Released	2000-08-23
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Methylomonas sp. J
Macromolecule	PROTEIN (AZURIN ISO-2) (protein)
Unique Ligands	CU

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1HN0 \| pdb_00001hn0	Download File View File

CRYSTAL STRUCTURE OF CHONDROITIN ABC LYASE I FROM PROTEUS VULGARIS AT 1.9 ANGSTROMS RESOLUTION

Huang, W., Cygler, M.

(2003) J Mol Biology 328: 623-634

Released	2003-04-08
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Proteus vulgaris
Macromolecule	CHONDROITIN ABC LYASE I (protein)
Unique Ligands	NA

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1IQX \| pdb_00001iqx	Download File View File

CRYSTAL STRUCTURE OF COBALT-SUBSTITUTED AMINE OXIDASE FROM ARTHROBACTER GLOBIFORMIS

Kishishita, S., Okajima, T., Mure, M., Kim, M., Yamaguchi, H., Hirota, S., Suzuki, S., Kuroda, S., Tanizawa, K.

(2003) J Am Chem Soc 125: 1041-1055

Released	2003-02-04
Method	X-RAY DIFFRACTION 2 Å
Organisms	Arthrobacter globiformis
Macromolecule	CO(II)-SUBSTITUTED AMINE OXIDASE (protein)
Unique Ligands	CO

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1IQY \| pdb_00001iqy	Download File View File

CRYSTAL STRUCTURE OF NICKEL-SUBSTITUTED AMINE OXIDASE FROM ARTHROBACTER GLOBIFORMIS

Kishishita, S., Okajima, T., Mure, M., Kim, M., Yamaguchi, H., Hirota, S., Kuroda, S., Tanizawa, K.

(2003) J Am Chem Soc 125: 1041-1055

Released	2003-02-04
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Arthrobacter globiformis
Macromolecule	AMINE OXIDASE (protein)
Unique Ligands	NI

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1IU7 \| pdb_00001iu7	Download File View File

HOLO FORM OF COPPER-CONTAINING AMINE OXIDASE FROM ARTHROBACTER GLOBIFORMIS

Kishishita, S., Okajima, T., Kim, M., Yamaguchi, H., Hirota, S., Suzuki, S., Kuroda, S., Tanizawa, K., Mure, M.

(2003) J Am Chem Soc 125: 1041-1055

Released	2003-02-04
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Arthrobacter globiformis
Macromolecule	AMINE OXIDASE (protein)
Unique Ligands	CU

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1J03 \| pdb_00001j03	Download File View File

Solution structure of a putative steroid-binding protein from Arabidopsis

Suzuki, S., Hatanaka, H., Kigawa, T., Terada, T., Shirouzu, M., Seki, M., Shinozaki, K., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

To be published

Released	2003-12-16
Method	SOLUTION NMR
Organisms	Arabidopsis thaliana
Macromolecule	putative steroid binding protein (protein)

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1J1H \| pdb_00001j1h	Download File View File

Solution structure of a tmRNA-binding protein, SmpB, from Thermus thermophilus

Someya, T., Nameki, N., Hosoi, H., Suzuki, S., Hatanaka, H., Fujii, M., Terada, T., Shirouzu, M., Inoue, Y., Shibata, T., Kuramitsu, S., Yokoyama, S., Kawai, G., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

(2003) FEBS Lett 535: 94-100

Released	2003-02-11
Method	SOLUTION NMR
Organisms	Thermus thermophilus
Macromolecule	Small Protein B (protein)

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1PMY \| pdb_00001pmy	Download File View File

REFINED CRYSTAL STRUCTURE OF PSEUDOAZURIN FROM METHYLOBACTERIUM EXTORQUENS AM1 AT 1.5 ANGSTROMS RESOLUTION

Inoue, T., Kai, Y., Harada, S., Kasai, N., Ohshiro, Y., Suzuki, S., Kohzuma, T., Tobari, J.

(1994) Acta Crystallogr D Biol Crystallogr 50: 317-328

Released	1994-07-31
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Methylorubrum extorquens
Macromolecule	PSEUDOAZURIN (protein)
Unique Ligands	CU

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1RKR \| pdb_00001rkr	Download File View File

CRYSTAL STRUCTURE OF AZURIN-I FROM ALCALIGENES XYLOSOXIDANS NCIMB 11015

Li, C., Inoue, T., Gotowda, M., Suzuki, S., Yamaguchi, K., Kataoka, K., Kai, Y.

(1998) Acta Crystallogr D Biol Crystallogr 54: 347-354

Released	1998-05-20
Method	X-RAY DIFFRACTION 2.45 Å
Organisms	Achromobacter xylosoxidans
Macromolecule	AZURIN-I (protein)
Unique Ligands	CU

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1TUO \| pdb_00001tuo	Download File View File

Crystal structure of putative phosphomannomutase from Thermus Thermophilus HB8

Misaki, S., Suzuki, S., Fujimoto, S., Sakurai, M., Kobayashi, M., Nishijima, K., Kunishima, N., Sugawara, M., Kuroishi, C., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

To be published

Released	2005-08-09
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Thermus thermophilus
Macromolecule	Putative phosphomannomutase (protein)

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1UAT \| pdb_00001uat	Download File View File

The significance of the flexible loop in the azurin (Az-iso2) from the obligate methylotroph Methylomonas sp. strain J

Inoue, T., Suzuki, S., Nisho, N., Yamaguchi, K., Kataoka, K., Tobari, J., Yong, X., Hamanaka, S., Matsumura, H., Kai, Y.

(2003) J Mol Biology 333: 117-124

Released	2004-03-30
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Methylomonas sp. J
Macromolecule	Azurin iso-2 (protein)
Unique Ligands	CU, SO4

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1UFM \| pdb_00001ufm	Download File View File

Solution structure of the PCI domain

Suzuki, S., Hatanaka, H., Kigawa, T., Shirouzu, M., Hayashizaki, Y., The RIKEN Genome Exploration Research Group Phase I & II Teams, Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

To be published

Released	2004-06-29
Method	SOLUTION NMR
Organisms	Mus musculus
Macromolecule	COP9 complex subunit 4 (protein)

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1UG9 \| pdb_00001ug9	Download File View File

Crystal Structure of Glucodextranase from Arthrobacter globiformis I42

Mizuno, M., Tonozuka, T., Suzuki, S., Uotsu-Tomita, R., Ohtaki, A., Kamitori, S., Nishikawa, A., Sakano, Y.

(2004) J Biological Chem 279: 10575-10583

Released	2003-12-09
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Arthrobacter globiformis
Macromolecule	glucodextranase (protein)
Unique Ligands	CA, GOL

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1UHF \| pdb_00001uhf	Download File View File

Solution Structure of the third SH3 domain of human intersectin 2(KIAA1256)

Suzuki, S., Hatanaka, H., Koshiba, S., Inoue, M., Kigawa, T., Terada, T., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

To be published

Released	2004-08-10
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	INTERSECTIN 2 (protein)

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1UHU \| pdb_00001uhu	Download File View File

Solution structure of the retroviral Gag MA-like domain of RIKEN cDNA 3110009E22

Suzuki, S., Hatanaka, H., Inoue, M., Kigawa, T., Terada, T., Shirouzu, M., Hayashizaki, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

To be published

Released	2004-07-27
Method	SOLUTION NMR
Organisms	Mus musculus
Macromolecule	product of RIKEN cDNA 3110009E22 (protein)

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1ULV \| pdb_00001ulv	Download File View File

Crystal Structure of Glucodextranase Complexed with Acarbose

Mizuno, M., Tonozuka, T., Suzuki, S., Uotsu-Tomita, R., Kamitori, S., Nishikawa, A., Sakano, Y.

(2004) J Biological Chem 279: 10575-10583

Released	2003-12-09
Method	X-RAY DIFFRACTION 2.42 Å
Organisms	Arthrobacter globiformis
Macromolecule	glucodextranase (protein)
Unique Ligands	CA
Unique branched monosaccharides	AC1, GLC