RCSB PDB: Search

1MQ7 \| pdb_00001mq7	Download File View File

CRYSTAL STRUCTURE OF DUTPASE FROM MYCOBACTERIUM TUBERCULOSIS (RV2697C)

Sawaya, M.R., Chan, S., Segelke, B.W., Lekin, T., Heike, K., Cho, U.S., Naranjo, C., Perry, L.J., Yeates, T.O., Eisenberg, D., TB Structural Genomics Consortium (TBSGC)

(2004) J Mol Biology 341: 503-517

Released	2002-10-09
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Mycobacterium tuberculosis
Macromolecule	DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE (protein)
Unique Ligands	TRS

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1RII \| pdb_00001rii	Download File View File

Crystal structure of phosphoglycerate mutase from M. Tuberculosis

Mueller, P., Sawaya, M.R., Chan, S., Wu, Y., Pashkova, I., Perry, J., Eisenberg, D., TB Structural Genomics Consortium (TBSGC)

(2005) Acta Crystallogr D Biol Crystallogr 61: 309-315

Released	2004-10-05
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Mycobacterium tuberculosis
Macromolecule	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (protein)
Unique Ligands	GOL

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1S4Q \| pdb_00001s4q	Download File View File

Crystal Structure of Guanylate Kinase from Mycobacterium tuberculosis (Rv1389)

Chan, S., Sawaya, M.R., Perry, L.J., Eisenberg, D., TB Structural Genomics Consortium (TBSGC)

To be published

Released	2004-01-27
Method	X-RAY DIFFRACTION 2.16 Å
Organisms	Mycobacterium tuberculosis H37Rv
Macromolecule	Guanylate kinase (protein)
Unique Ligands	CL, FMT

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1SGV \| pdb_00001sgv	Download File View File

STRUCTURE OF TRNA PSI55 PSEUDOURIDINE SYNTHASE (TRUB)

Chaudhuri, B.N., Chan, S., Perry, L.J., Yeates, T.O., TB Structural Genomics Consortium (TBSGC)

(2004) J Biological Chem 279: 24585-24591

Released	2004-03-02
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Mycobacterium tuberculosis H37Rv
Macromolecule	tRNA pseudouridine synthase B (protein)

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1SIX \| pdb_00001six	Download File View File

Mycobacterium tuberculosis dUTPase complexed with magnesium and alpha,beta-imido-dUTP

Sawaya, M.R., Chan, S., Segelke, B., Lekin, T., Krupka, H., Cho, U.-S., Kim, M., So, M., Kim, C.-Y., Naranjo, C.M., Rogers, Y.C., Park, M.S., Waldo, G.S., Pashkov, I., Cascio, D., Yeates, T.O., Perry, J.L., Terwilliger, T.C., Eisenberg, D., TB Structural Genomics Consortium (TBSGC)

(2004) J Mol Biology 341: 503-517

Released	2004-03-09
Method	X-RAY DIFFRACTION 1.3 Å
Organisms	Mycobacterium tuberculosis
Macromolecule	Deoxyuridine 5'-triphosphate nucleotidohydrolase (protein)
Unique Ligands	DUP, MG, TRS

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1SJN \| pdb_00001sjn	Download File View File

Mycobacterium tuberculosis dUTPase complexed with magnesium and alpha,beta-imido-dUTP

Sawaya, M.R., Chan, S., Segelke, B., Lekin, T., Krupka, H., Cho, U.S., Kim, M.-Y., So, M., Kim, C.-Y., Naranjo, C.M., Rogers, Y.C., Park, M.S., Waldo, G.S., Pashkov, I., Cascio, D., Yeates, T.O., Perry, J.L., Terwilliger, T.C., Eisenberg, D., TB Structural Genomics Consortium (TBSGC)

(2004) J Mol Biology 341: 503-517

Released	2004-03-09
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Mycobacterium tuberculosis
Macromolecule	Deoxyuridine 5'-triphosphate nucleotidohydrolase (protein)
Unique Ligands	DUP, MG, NO3, TRS

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1SLH \| pdb_00001slh	Download File View File

Mycobacterium tuberculosis dUTPase complexed with magnesium and dUDP

Sawaya, M.R., Chan, S., Segelke, B., Lekin, T., Krupka, H., Cho, U.S., Kim, M.-Y., So, M., Kim, C.-Y., Naranjo, C.M., Rogers, Y.C., Park, M.S., Waldo, G.S., Pashkov, I., Cascio, D., Yeates, T.O., Perry, J.L., Terwilliger, T.C., Eisenberg, D., TB Structural Genomics Consortium (TBSGC)

(2004) J Mol Biology 341: 503-517

Released	2004-03-16
Method	X-RAY DIFFRACTION 3 Å
Organisms	Mycobacterium tuberculosis
Macromolecule	Deoxyuridine 5'-triphosphate nucleotidohydrolase (protein)
Unique Ligands	DUD, MG, TRS

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1SM8 \| pdb_00001sm8	Download File View File

M. tuberculosis dUTPase complexed with chromium and dUTP

Sawaya, M.R., Chan, S., Segelke, B., Lekin, T., Krupka, H., Cho, U.S., Kim, M.-Y., So, M., Kim, C.-Y., Naranjo, C.M., Rogers, Y.C., Park, M.S., Waldo, G.S., Pashkov, I., Cascio, D., Yeates, T.O., Perry, J.L., Terwilliger, T.C., Eisenberg, D., TB Structural Genomics Consortium (TBSGC)

(2004) J Mol Biology 341: 503-517

Released	2004-03-16
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Mycobacterium tuberculosis
Macromolecule	Deoxyuridine 5'-triphosphate nucleotidohydrolase (protein)
Unique Ligands	CR, DUT, NO3, TRS

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1SMC \| pdb_00001smc	Download File View File

Mycobacterium tuberculosis dUTPase complexed with dUTP in the absence of metal ion.

Sawaya, M.R., Chan, S., Segelke, B., Lekin, T., Krupka, H., Cho, U.S., Kim, M.-Y., So, M., Kim, C.-Y., Naranjo, C.M., Rogers, Y.C., Park, M.S., Waldo, G.S., Pashkov, I., Cascio, D., Yeates, T.O., Perry, J.L., Terwilliger, T.C., Eisenberg, D., TB Structural Genomics Consortium (TBSGC)

(2004) J Mol Biology 341: 503-517

Released	2004-03-16
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Mycobacterium tuberculosis
Macromolecule	Deoxyuridine 5'-triphosphate nucleotidohydrolase (protein)
Unique Ligands	DUT, NO3, TRS

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1SNF \| pdb_00001snf	Download File View File

MYCOBACTERIUM TUBERCULOSIS DUTPASE COMPLEXED WITH MAGNESIUM AND DEOXYURIDINE 5'-MONOPHOSPHATE

Sawaya, M.R., Chan, S., Segelke, B., Lekin, T., Krupka, H., Cho, U.S., Kim, M.-Y., So, M., Kim, C.-Y., Naranjo, C.M., Rogers, Y.C., Park, M.S., Waldo, G.S., Pashkov, I., Cascio, D., Yeates, T.O., Perry, J.L., Terwilliger, T.C., Eisenberg, D., TB Structural Genomics Consortium (TBSGC)

(2004) J Mol Biology 341: 503-517

Released	2004-03-16
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Mycobacterium tuberculosis
Macromolecule	Deoxyuridine 5'-triphosphate nucleotidohydrolase (protein)
Unique Ligands	MG, NO3, TRS, UMP

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1Y67 \| pdb_00001y67	Download File View File

Crystal Structure of Manganese Superoxide Dismutase from Deinococcus radiodurans

Chan, S., Tanaka, S., Sawaya, M.R., Perry, L.J.

To be published

Released	2004-12-21
Method	X-RAY DIFFRACTION 1.853 Å
Organisms	Deinococcus radiodurans
Macromolecule	Manganese Superoxide dismutase (protein)
Unique Ligands	FE

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1Z8F \| pdb_00001z8f	Download File View File

Guanylate Kinase Double Mutant A58C, T157C from Mycobacterium tuberculosis (Rv1389)

Chan, S., Sawaya, M.R., Choi, B., Zocchi, G., Perry, L.J., Mycobacterium Tuberculosis Structural Proteomics Project (XMTB)

To be published

Released	2005-04-12
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Mycobacterium tuberculosis
Macromolecule	Guanylate kinase (protein)
Unique Ligands	FMT

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2AW9 \| pdb_00002aw9	Download File View File

Superoxide dismutase with manganese from Deinococcus radiodurans

Tanaka, S., Sawaya, M.R., Chan, S., Perry, L.J.

To be published

Released	2006-08-22
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Deinococcus radiodurans
Macromolecule	Superoxide dismutase [Mn] (protein)
Unique Ligands	MN

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2GM7 \| pdb_00002gm7	Download File View File

TenA Homolog/Thi-4 Thiaminase from Pyrobaculum Aerophilum

Sawaya, M.R., Chan, S., Han, G.W., Perry, L.J.

To be published

Released	2006-04-18
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Pyrobaculum aerophilum str. IM2
Macromolecule	tenA homolog/Thi-4 Thiaminase (protein)
Unique Ligands	GOL, PE4, PO4

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2GM8 \| pdb_00002gm8	Download File View File

TenA Homolog/Thi-4 Thiaminase complexed with product 4-amino-5-hydroxymethyl-2-methylpyrimidine

Sawaya, M.R., Chan, S., Han, G.W., Perry, L.J., Pashkov, I.

To be published

Released	2006-04-18
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Pyrobaculum aerophilum str. IM2
Macromolecule	tenA homolog/Thi-4 Thiaminase (protein)
Unique Ligands	EDO, HMH

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2QYG \| pdb_00002qyg	Download File View File

Crystal Structure of a RuBisCO-like Protein rlp2 from Rhodopseudomonas palustris

Li, H., Chan, S., Tabita, F.R., Eisenberg, D.

(2007) Microbiol Mol Biol Rev 71: 576-599

Released	2007-09-11
Method	X-RAY DIFFRACTION 3.3 Å
Organisms	Rhodopseudomonas palustris CGA009
Macromolecule	Ribulose bisphosphate carboxylase-like protein 2 (protein)

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3G5O \| pdb_00003g5o	Download File View File

The crystal structure of the toxin-antitoxin complex RelBE2 (Rv2865-2866) from Mycobacterium tuberculosis

Miallau, L., Cascio, D., Eisenberg, D., TB Structural Genomics Consortium (TBSGC), Integrated Center for Structure and Function Innovation (ISFI)

(2013) Structure 21: 627-637

Released	2009-04-14
Method	X-RAY DIFFRACTION 2 Å
Organisms	Mycobacterium tuberculosis H37Rv
Macromolecule	Uncharacterized protein Rv2865 (protein) Uncharacterized protein Rv2866 (protein)
Unique Ligands	CL, GOL, IMD, SCN, TRS

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3H6P \| pdb_00003h6p	Download File View File

Crystal structure of Rv3019c-Rv3020c from Mycobacterium tuberculosis

Chan, S., Arbing, M., Phan, T., Kaufmann, M., Cascio, D., Eisenberg, D., TB Structural Genomics Consortium (TBSGC), Integrated Center for Structure and Function Innovation (ISFI)

To be published

Released	2009-06-30
Method	X-RAY DIFFRACTION 1.91 Å
Organisms	Mycobacterium tuberculosis
Macromolecule	ESAT-6 LIKE PROTEIN ESXS (protein) ESAT-6-like protein esxR (protein)
Unique Ligands	GOL

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3K6U \| pdb_00003k6u	Download File View File

M. acetivorans Molybdate-Binding Protein (ModA) in Unliganded Open Form

Chan, S., Giuroiu, I., Chernishof, I., Sawaya, M.R., Chiang, J., Gunsalus, R.P., Arbing, M.A., Perry, L.J.

(2010) Acta Crystallogr Sect F Struct Biol Cryst Commun 66: 242-250

Released	2010-01-12
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Methanosarcina acetivorans
Macromolecule	Solute-binding protein MA_0280 (protein)

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3K6V \| pdb_00003k6v	Download File View File

M. acetivorans Molybdate-Binding Protein (ModA) in Citrate-Bound Open Form

Chan, S., Giuroiu, I., Chernishof, I., Sawaya, M.R., Chiang, J., Gunsalus, R.P., Arbing, M.A., Perry, L.J.

(2010) Acta Crystallogr Sect F Struct Biol Cryst Commun 66: 242-250

Released	2010-01-12
Method	X-RAY DIFFRACTION 1.69 Å
Organisms	Methanosarcina acetivorans
Macromolecule	Solute-binding protein MA_0280 (protein)
Unique Ligands	CIT

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3K6W \| pdb_00003k6w	Download File View File

Apo and ligand bound structures of ModA from the archaeon Methanosarcina acetivorans

Chan, S., Chernishof, I., Giuroiu, I., Sawaya, M.R., Chiang, J., Gunsalus, R.P., Arbing, M.A., Perry, L.J.

(2010) Acta Crystallogr Sect F Struct Biol Cryst Commun 66: 242-250

Released	2010-01-12
Method	X-RAY DIFFRACTION 2.45 Å
Organisms	Methanosarcina acetivorans
Macromolecule	Solute-binding protein MA_0280 (protein)
Unique Ligands	MOO, SO4

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3K6X \| pdb_00003k6x	Download File View File

M. acetivorans Molybdate-Binding Protein (ModA) in Molybdate-Bound Close Form with 2 Molecules in Asymmetric Unit Forming Beta Barrel

Chan, S., Chernishof, I., Giuroiu, I., Sawaya, M.R., Chiang, J., Gunsalus, R.P., Arbing, M.A., Perry, L.J.

(2010) Acta Crystallogr Sect F Struct Biol Cryst Commun 66: 242-250

Released	2010-01-12
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Methanosarcina acetivorans
Macromolecule	Solute-binding protein MA_0280 (protein)
Unique Ligands	MOO, SO4

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3OEI \| pdb_00003oei	Download File View File

Crystal structure of Mycobacterium tuberculosis RelJK (Rv3357-Rv3358-RelBE3)

Miallau, L., Cascio, D., Eisenberg, D., TB Structural Genomics Consortium (TBSGC)

(2013) Structure 21: 627-637

Released	2011-03-16
Method	X-RAY DIFFRACTION 2.145 Å
Organisms	Mycobacterium tuberculosis
Macromolecule	RelJ (Antitoxin Rv3357) (protein) RelK (Toxin Rv3358) (protein)
Unique Ligands	FLC

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3OGI \| pdb_00003ogi	Download File View File

Crystal structure of the Mycobacterium tuberculosis H37Rv EsxOP complex (Rv2346c-Rv2347c)

Arbing, M.A., Chan, S., Zhou, T.T., Ahn, C., Harris, L., Kuo, E., Sawaya, M.R., Cascio, D., Eisenberg, D., Integrated Center for Structure and Function Innovation (ISFI), TB Structural Genomics Consortium (TBSGC)

(2013) PLoS One 8: e81753-e81753

Released	2010-08-25
Method	X-RAY DIFFRACTION 2.549 Å
Organisms	Mycobacterium tuberculosis
Macromolecule	Putative ESAT-6-like protein 6 (protein) Putative ESAT-6-like protein 7 (protein)

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3Q4H \| pdb_00003q4h	Download File View File

Crystal structure of the Mycobacterium smegmatis EsxGH complex (MSMEG_0620-MSMEG_0621)

Chan, S., Harris, L., Kuo, E., Ahn, C., Zhou, T.T., Nguyen, L., Shin, A., Sawaya, M.R., Cascio, D., Arbing, M.A., Eisenberg, D., Integrated Center for Structure and Function Innovation (ISFI), TB Structural Genomics Consortium (TBSGC)

(2013) PLoS One 8: e81753-e81753

Released	2011-01-26
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Mycolicibacterium smegmatis MC2 155
Macromolecule	Low molecular weight protein antigen 7 (protein) Pe family protein (protein)

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1MQ7 | pdb_00001mq7

1RII | pdb_00001rii

1S4Q | pdb_00001s4q

1SGV | pdb_00001sgv

1SIX | pdb_00001six

1SJN | pdb_00001sjn

1SLH | pdb_00001slh

1SM8 | pdb_00001sm8

1SMC | pdb_00001smc

1SNF | pdb_00001snf

1Y67 | pdb_00001y67

1Z8F | pdb_00001z8f

2AW9 | pdb_00002aw9

2GM7 | pdb_00002gm7

2GM8 | pdb_00002gm8

2QYG | pdb_00002qyg

3G5O | pdb_00003g5o

3H6P | pdb_00003h6p

3K6U | pdb_00003k6u

3K6V | pdb_00003k6v

3K6W | pdb_00003k6w

3K6X | pdb_00003k6x

3OEI | pdb_00003oei

3OGI | pdb_00003ogi

3Q4H | pdb_00003q4h