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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Chemical ID(s) = IYR

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Search Summary

This query matches 27 Polymer Entities.

Refinements

Structure Determination Methodology

experimental (27)

Scientific Name of Source Organism

	Homo sapiens (4)
	Conus regius (2)
	Leuconostoc mesenteroides (2)
	Onion yellows phytoplasma OY-W (2)
	Thaumatococcus daniellii (2)
	Thermus thermophilus HB27 (2)
	Trichoderma reesei (2)
	Ascophyllum nodosum (1)
	Bos taurus (1)
	Escherichia coli K-12 (1)

More...

Taxonomy

	Eukaryota (13)
	Bacteria (10)
	Duplodnaviria (1)
	other sequences (1)

Experimental Method

	X-RAY DIFFRACTION (23)
	SOLUTION NMR (4)

Polymer Entity Type

Protein (27)

Refinement Resolution (Å)

	0.5 - 1.0 (1)
	1.5 - 2.0 (3)
	2.0 - 2.5 (16)
	2.5 - 3.0 (2)
	3.0 - 3.5 (1)

Release Date

	1995 - 1999 (1)
	2000 - 2004 (1)
	2005 - 2009 (11)
	2010 - 2014 (3)
	2015 - 2019 (9)
	2025 - 2029 (2)

Enzyme Classification Name

	Transferases (6)
	Hydrolases (5)
	Oxidoreductases (1)

Symmetry Type

	Asymmetric (18)
	Cyclic (6)
	Dihedral (4)

SCOP Classification

	Alpha and beta proteins (a+b) (4)
	All beta proteins (5)
	All alpha proteins (2)
	Artifacts (1)

AllSelected

1 to 25 of 27 Polymer Entities

Page 1 of 2

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1CF0: Entity 2	Download File View File

HUMAN PLATELET PROFILIN COMPLEXED WITH AN L-PRO10-IODOTYROSINE PEPTIDE

Rozwarski, D.A., Mahoney, N.M., Almo, S.C.

(1999) Nat Struct Biol 6: 666-671

Released	1999-07-06
Method	X-RAY DIFFRACTION 2.2 Å
Chain ID	C
Macromolecule	PROTEIN (L-PRO10-IODOTYROSINE)

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1QI9: Entity 1	Download File View File

X-RAY SIRAS STRUCTURE DETERMINATION OF A VANADIUM-DEPENDENT HALOPEROXIDASE FROM ASCOPHYLLUM NODOSUM AT 2.0 A RESOLUTION

Weyand, M., Hecht, H.-J., Kiess, M., Liaud, M.F., Vilter, H., Schomburg, D.

(1999) J Mol Biology 293: 595-611

Released	2000-06-10
Method	X-RAY DIFFRACTION 2.05 Å
Chain ID	A
Organism	Ascophyllum nodosum
Macromolecule	Vanadium-dependent bromoperoxidase

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1XXZ: Entity 1	Download File View File

Solution structure of sst1-selective somatostatin (SRIF) analog

Grace, C.R.R., Durrer, L., Koerber, S.C., Erchegyi, J., Reubi, J.C., Rivier, J.E., Riek, R.

(2005) J Med Chem 48: 523-533

Released	2005-02-15
Method	SOLUTION NMR
Chain ID	A
Macromolecule	SST1-selective somatosatin (analog 5)

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1XY9: Entity 1	Download File View File

NMR strcutre of sst1-selective somatostatin (SRIF) analog 1

Grace, C.R.R., Durrer, L., Koerber, S.C., Erchegyi, J., Reubi, J.C., Rivier, J.E., Riek, R.

(2005) J Med Chem 48: 523-533

Released	2005-02-15
Method	SOLUTION NMR
Chain ID	A
Macromolecule	SST1-selective somatosatin analog

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2D8O: Entity 1	Download File View File

Structure of VIL-thaumatin

Miyatake, H., Hasegawa, T., Yamano, A.

(2006) Acta Crystallogr D Biol Crystallogr 62: 280-289

Released	2006-07-11
Method	X-RAY DIFFRACTION 2.38 Å
Chain ID	A
Organism	Thaumatococcus daniellii
Macromolecule	Thaumatin I

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2D8P: Entity 1	Download File View File

Structure of HYPER-VIL-thaumatin

Miyatake, H., Hasegawa, T., Yamano, A.

(2006) Acta Crystallogr D Biol Crystallogr 62: 280-289

Released	2006-07-11
Method	X-RAY DIFFRACTION 2.3 Å
Chain ID	A
Organism	Thaumatococcus daniellii
Macromolecule	Thaumatin I

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2D8W: Entity 1	Download File View File

Structure of HYPER-VIL-trypsin

Miyatake, H., Hasegawa, T., Yamano, A.

(2006) Acta Crystallogr D Biol Crystallogr 62: 280-289

Released	2006-07-11
Method	X-RAY DIFFRACTION 2 Å
Chain ID	A
Organism	Bos taurus
Macromolecule	Cationic trypsin

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2D97: Entity 1	Download File View File

Structure of VIL-xylanase

Miyatake, H., Hasegawa, T., Yamano, A.

(2006) Acta Crystallogr D Biol Crystallogr 62: 280-289

Released	2006-07-11
Method	X-RAY DIFFRACTION 2.01 Å
Chain ID	A
Organism	Trichoderma reesei
Macromolecule	Endo-1,4-beta-xylanase 2

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2D98: Entity 1	Download File View File

Structure of VIL (extra KI/I2 added)-xylanase

Miyatake, H., Hasegawa, T., Yamano, A.

(2006) Acta Crystallogr D Biol Crystallogr 62: 280-289

Released	2006-07-11
Method	X-RAY DIFFRACTION 2 Å
Chain ID	A
Organism	Trichoderma reesei
Macromolecule	Endo-1,4-beta-xylanase 2

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2R1Q: Entity 1	Download File View File

Crystal Structure of Iodinated Human Saposin D in Space Group C2221

Maier, T., Rossman, M., Saenger, W.

(2008) Structure 16: 809-817

Released	2008-04-29
Method	X-RAY DIFFRACTION 2.5 Å
Chain ID	A
Organism	Homo sapiens
Macromolecule	Proactivator polypeptide

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2Z10: Entity 1	Download File View File

Crystal structure of putative acetyltransferase

Murayama, K., Kato-Murayama, M., Terada, T., Kuramitsu, S., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

(2009) Structure 17: 335-344

Released	2007-11-13
Method	X-RAY DIFFRACTION 1.77 Å
Chain ID	A
Organism	Thermus thermophilus HB27
Macromolecule	Ribosomal-protein-alanine acetyltransferase

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2Z11: Entity 1	Download File View File

Crystal structure of putative acetyltransferase

Murayama, K., Kato-Murayama, M., Terada, T., Kuramitsu, S., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

To be published

Released	2007-11-13
Method	X-RAY DIFFRACTION 2.15 Å
Chain ID	A
Organism	Thermus thermophilus HB27
Macromolecule	Ribosomal-protein-alanine acetyltransferase

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2ZXV: Entity 1	Download File View File

Crystal structure of putative acetyltransferase from T. thermophilus HB8

Murayama, K., Kato-Murayama, M., Terada, T., Kuramitsu, S., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

(2009) Structure 17: 335-344

Released	2009-02-17
Method	X-RAY DIFFRACTION 2.3 Å
Chain IDs	A, B, C, D
Organism	Thermus thermophilus HB8
Macromolecule	Putative uncharacterized protein TTHA1799

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3VN3: Entity 1	Download File View File

Fungal antifreeze protein exerts hyperactivity by constructing an inequable beta-helix

Kondo, H., Xiao, N., Hanada, Y., Sugimoto, H., Hoshino, T., Garnham, C.P., Davies, P.L., Tsuda, S.

(2012) Proc Natl Acad Sci U S A 109: 9360-9365

Released	2012-06-06
Method	X-RAY DIFFRACTION 0.95 Å
Chain IDs	A, B
Organism	Typhula ishikariensis
Macromolecule	Antifreeze protein

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4EBK: Entity 1	Download File View File

Crystal structure of aminoglycoside 4'-O-adenylyltransferase ANT(4')-IIb, tobramycin-bound

Stogios, P.J., Dong, A., Minasov, G., Evdokimova, E., Egorova, O., Yim, V., Kudritska, M., Courvalin, P., Savchenko, A., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)

To be published

Released	2012-04-04
Method	X-RAY DIFFRACTION 2.15 Å
Chain IDs	A, B
Organism	Pseudomonas aeruginosa
Macromolecule	Aminoglycoside nucleotidyltransferase

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4IKM: Entity 1	Download File View File

X-ray structure of CARD8 CARD domain

Jin, T., Huang, M., Smith, P., Jiang, J., Xiao, T.

(2013) Acta Crystallogr Sect F Struct Biol Cryst Commun 69: 482-487

Released	2013-05-08
Method	X-RAY DIFFRACTION 2.4606 Å
Chain ID	A
Organism	Escherichia coli K-12 Homo sapiens
Macromolecule	Maltose-binding periplasmic protein, Caspase recruitment domain-containing protein 8

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4TTU: Entity 1	Download File View File

N-terminally truncated dextransucrase DSR-E from Leuconostoc mesenteroides NRRL B-1299 in complex with isomaltotriose

Brison, Y., Remaud-Simeon, M., Mourey, L., Tranier, S.

(2016) J Biological Chem 291: 7527-7540

Released	2015-07-29
Method	X-RAY DIFFRACTION 2.18 Å
Chain ID	A
Organism	Leuconostoc mesenteroides
Macromolecule	Dextransucrase

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4TVC: Entity 1	Download File View File

N-terminally truncated dextransucrase DSR-E from Leuconostoc mesenteroides NRRL B-1299 in complex with gluco-oligosaccharides

Brison, Y., Remaud-Simeon, M., Mourey, L., Tranier, S.

(2016) J Biological Chem 291: 7527-7540

Released	2015-07-29
Method	X-RAY DIFFRACTION 1.85 Å
Chain ID	A
Organism	Leuconostoc mesenteroides
Macromolecule	Dextransucrase

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4TVD: Entity 1	Download File View File

N-terminally truncated dextransucrase DSR-E from Leuconostoc mesenteroides NRRL B-1299 in complex with D-glucose

Brison, Y., Remaud-Simeon, M., Mourey, L., Tranier, S.

(2016) J Biological Chem 291: 7527-7540

Released	2015-08-05
Method	X-RAY DIFFRACTION 2.3 Å
Chain ID	A
Organism	Leuconostoc mesenteroides subsp. mesenteroides
Macromolecule	Dextransucrase

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5EHB: Entity 1	Download File View File

A de novo designed hexameric coiled-coil peptide with iodotyrosine

Lizatovic, R., Aurelius, O., Stenstrom, O., Drakenberg, T., Akke, M., Logan, D.T., Andre, I.

(2016) Structure 24: 946-955

Released	2016-06-15
Method	X-RAY DIFFRACTION 3.19 Å
Chain IDs	A, B
Organism	synthetic construct
Macromolecule	pHiosYI

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5EMS: Entity 2	Download File View File

Crystal Structure of an iodinated insulin analog

Lawrence, M.C., Pandyarajan, V., Wan, Z., Weiss, M.A.

(2016) J Biological Chem 291: 27023-27041

Released	2016-11-16
Method	X-RAY DIFFRACTION 2.3 Å
Chain IDs	B, D, F, H, J
Organism	Homo sapiens
Macromolecule	Insulin

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5V7F: Entity 1	Download File View File

T4 lysozyme Y18Ymi

Carlsson, A.-C.C.

(2018) Biochemistry 57: 4135-4147

Released	2018-06-20
Method	X-RAY DIFFRACTION 1.65 Å
Chain ID	A
Organism	Tequatrovirus T4
Macromolecule	Lysozyme

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6D0Y: Entity 3	Download File View File

X-ray Crystal Structure of PGC-1beta C-terminus bound to the CBP80-CBP20 Cap Binding Complex

Gleghorn, M.L., Maquat, L.E.

(2018) Genes Dev 32: 555-567

Released	2018-04-25
Method	X-RAY DIFFRACTION 2.676 Å
Chain ID	C [auth B]
Organism	Homo sapiens
Macromolecule	Peroxisome proliferator-activated receptor gamma coactivator 1-beta

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6JQA: Entity 1	Download File View File

Crystal structure of phyllogen, a phyllody inducing effector protein of phytoplasma.

Miyatake, H., Maejima, K.

(2019) Biochem Biophys Res Commun 513: 952-957

Released	2019-05-15
Method	X-RAY DIFFRACTION 2.402 Å
Chain ID	A
Organism	Onion yellows phytoplasma OY-W
Macromolecule	Phytoplasmal effector causing phyllody 1

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6JQA: Entity 3	Download File View File

Crystal structure of phyllogen, a phyllody inducing effector protein of phytoplasma.

Miyatake, H., Maejima, K.

(2019) Biochem Biophys Res Commun 513: 952-957

Released	2019-05-15
Method	X-RAY DIFFRACTION 2.402 Å
Chain ID	D
Organism	Onion yellows phytoplasma OY-W
Macromolecule	Phytoplasmal effector causing phyllody 1