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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Common Name (Entity Source Organism) = "mouse"

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Search Summary

This query matches 172 Polymer Entities.

Refinements

Structure Determination Methodology

experimental (172)

Scientific Name of Source Organism

	Lambdavirus lambda (102)
	Escherichia phage Lambda (52)
	Escherichia coli (21)
	Escherichia coli K-12 (16)
	Streptococcus pyogenes (14)
	Phage 434 (11)
	Enterobacteria phage P21 (7)
	Aquifex aeolicus VF5 (5)
	synthetic construct (3)
	Escherichia coli O157:H7 (2)

More...

Taxonomy

	Duplodnaviria (172)
	Bacteria (58)
	other sequences (3)

Experimental Method

	X-RAY DIFFRACTION (77)
	ELECTRON MICROSCOPY (69)
	SOLUTION NMR (26)

Polymer Entity Type

	Protein (172)
	DNA (65)
	RNA (27)

Refinement Resolution (Å)

	1.0 - 1.5 (6)
	1.5 - 2.0 (18)
	2.0 - 2.5 (22)
	2.5 - 3.0 (30)
	3.0 - 3.5 (33)
	3.5 - 4.0 (21)
	4.0 - 4.5 (6)
	> 4.5 (10)

Release Date

	1985 - 1989 (4)
	1990 - 1994 (7)
	1995 - 1999 (15)
	2000 - 2004 (20)
	2005 - 2009 (23)
	2010 - 2014 (11)
	2015 - 2019 (16)
	2020 - 2024 (75)
	2025 - 2029 (1)

Enzyme Classification Name

	Transferases (29)
	Hydrolases (39)
	Isomerases (3)

Membrane Protein Annotation

	MemProtMD (1)
	OPM (1)

Symmetry Type

	Asymmetric (101)
	Cyclic (62)
	Dihedral (4)
	Helical (5)
	Icosahedral (4)
	Tetrahedral (3)

SCOP Classification

	All alpha proteins (37)
	Alpha and beta proteins (a+b) (17)
	All beta proteins (10)
	Artifacts (7)
	Alpha and beta proteins (a/b) (5)
	Peptides (2)

AllSelected

1 to 25 of 172 Polymer Entities

Page 1 of 7

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1AE9 \| pdb_00001ae9	Download File View File

STRUCTURE OF THE LAMBDA INTEGRASE CATALYTIC CORE

Kwon, H.J., Tirumalai, R., Landy, A., Ellenberger, T.

(1997) Science 276: 126-131

Released	1997-11-19
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Lambdavirus lambda
Macromolecule	LAMBDA INTEGRASE (protein)

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1AM7 \| pdb_00001am7	Download File View File

Lysozyme from bacteriophage lambda

Evrard, C., Fastrez, J., Declercq, J.P.

(1998) J Mol Biology 276: 151-164

Released	1997-12-24
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Lambdavirus lambda
Macromolecule	LYSOZYME (protein)
Unique Ligands	IPA

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1AVQ \| pdb_00001avq	Download File View File

TOROIDAL STRUCTURE OF LAMBDA EXONUCLEASE DETERMINED AT 2.4 ANGSTROMS

Kovall, R.A., Matthews, B.W.

(1997) Science 277: 1824-1827

Released	1998-03-18
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Lambdavirus lambda
Macromolecule	LAMBDA EXONUCLEASE (protein)
Unique Ligands	ACT, PO4

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1C5E \| pdb_00001c5e	Download File View File

BACTERIOPHAGE LAMBDA HEAD PROTEIN D

Yang, F., Forrer, P., Dauter, Z., Pluckthun, A., Wlodawer, A.

(2000) Nat Struct Biol 7: 230-237

Released	2000-03-08
Method	X-RAY DIFFRACTION 1.1 Å
Organisms	Lambdavirus lambda
Macromolecule	HEAD DECORATION PROTEIN (protein)
Unique Ligands	GOL

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1COP \| pdb_00001cop	Download File View File

THREE-DIMENSIONAL DIMER STRUCTURE OF THE LAMBDA-CRO REPRESSOR IN SOLUTION AS DETERMINED BY HETERONUCLEAR MULTIDIMENSIONAL NMR

Matsuo, H., Shirakawa, M., Kyogoku, Y.

(1995) J Mol Biology 254: 668-680

Released	1995-10-15
Method	SOLUTION NMR
Organisms	Lambdavirus lambda
Macromolecule	CRO REPRESSOR (protein)

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1D1L \| pdb_00001d1l	Download File View File

CRYSTAL STRUCTURE OF CRO-F58W MUTANT

Rupert, P.B., Mollah, A.K., Mossing, M.C., Matthews, B.W.

(2000) J Mol Biology 296: 1079-1090

Released	1999-10-06
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Lambdavirus lambda
Macromolecule	LAMBDA CRO REPRESSOR (protein)
Unique Ligands	SO4

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1D1M \| pdb_00001d1m	Download File View File

CRYSTAL STRUCTURE OF CRO K56-[DGEVK]-F58W MUTANT

Rupert, P.B., Mollah, A.K., Mossing, M.C., Matthews, B.W.

(2000) J Mol Biology 296: 1079-1090

Released	1999-09-24
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Lambdavirus lambda
Macromolecule	LAMBDA CRO REPRESSOR (protein)

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1D9U \| pdb_00001d9u	Download File View File

BACTERIOPHAGE LAMBDA LYSOZYME COMPLEXED WITH A CHITOHEXASACHARIDE

Leung, A.K.W., Duewel, H.S., Honek, J.F., Berghuis, A.M.

(2001) Biochemistry 40: 5665-5673

Released	2001-05-23
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Lambdavirus lambda
Macromolecule	BACTERIOPHAGE LAMBDA LYSOZYME (protein)
Unique Ligands	SO4
Unique branched monosaccharides	NAG, NDG

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1F39 \| pdb_00001f39	Download File View File

CRYSTAL STRUCTURE OF THE LAMBDA REPRESSOR C-TERMINAL DOMAIN

Bell, C.E., Frescura, P., Hochschild, A., Lewis, M.

(2000) Cell 101: 801-811

Released	2000-07-26
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Lambdavirus lambda
Macromolecule	REPRESSOR PROTEIN CI (protein)

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1G5B \| pdb_00001g5b	Download File View File

BACTERIOPHAGE LAMBDA SER/THR PROTEIN PHOSPHATASE

Voegtli, W.C., White, D.J., Reiter, N.J., Rusnak, F., Rosenzweig, A.C.

(2000) Biochemistry 39: 15365-15374

Released	2001-03-07
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Lambdavirus lambda
Macromolecule	SERINE/THREONINE PROTEIN PHOSPHATASE (protein)
Unique Ligands	HG, MN, SO4

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1HJI \| pdb_00001hji	Download File View File

BACTERIOPHAGE HK022 NUN-PROTEIN-NUTBOXB-RNA COMPLEX

Faber, C., Schaerpf, M., Becker, T., Sticht, H., Roesch, P.

(2001) J Biological Chem 276: 32064

Released	2002-01-29
Method	SOLUTION NMR
Organisms	Lambdavirus lambda Shamshuipovirus HK022
Macromolecule	NUN-PROTEIN (protein) RNA (5-R(PGPCPCPCPUPGPAPAPAPAPAPGPGPGP*C)-3) (nucleic acid)

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1HYW \| pdb_00001hyw	Download File View File

SOLUTION STRUCTURE OF BACTERIOPHAGE LAMBDA GPW

Maxwell, K.L., Yee, A.A., Booth, V., Arrowsmith, C.H., Gold, M., Davidson, A.R.

(2001) J Mol Biology 308: 9-14

Released	2001-04-25
Method	SOLUTION NMR
Organisms	Lambdavirus lambda
Macromolecule	HEAD-TO-TAIL JOINING PROTEIN W (protein)

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1J9I \| pdb_00001j9i	Download File View File

STRUCTURE OF THE DNA BINDING DOMAIN OF THE GPNU1 SUBUNIT OF LAMBDA TERMINASE

De Beer, T., Meyer, J., Ortega, M., Yang, Q., Maes, L., Duffy, C., Berton, N., Sippy, J., Overduin, M., Feiss, M., Catalano, C.

(2002) Mol Cell 9: 981-991

Released	2002-08-14
Method	SOLUTION NMR
Organisms	Lambdavirus lambda
Macromolecule	TERMINASE SMALL SUBUNIT (protein)

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1K0H \| pdb_00001k0h	Download File View File

Solution structure of bacteriophage lambda gpFII

Maxwell, K.L., Yee, A.A., Arrowsmith, C.H., Gold, M., Davidson, A.R.

(2002) J Mol Biology 318: 1395-1404

Released	2002-07-17
Method	SOLUTION NMR
Organisms	Lambdavirus lambda
Macromolecule	gpFII (protein)

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1KCA \| pdb_00001kca	Download File View File

Crystal Structure of the lambda Repressor C-terminal Domain Octamer

Bell, C.E., Lewis, M.

(2001) J Mol Biology 314: 1127-1136

Released	2001-12-21
Method	X-RAY DIFFRACTION 2.91 Å
Organisms	Lambdavirus lambda
Macromolecule	REPRESSOR PROTEIN CI (protein)

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1KJK \| pdb_00001kjk	Download File View File

Solution structure of the lambda integrase amino-terminal domain

Wojciak, J.M., Sarkar, D., Landy, A., Clubb, R.T.

(2002) Proc Natl Acad Sci U S A 99: 3434-3439

Released	2002-03-27
Method	SOLUTION NMR
Organisms	Lambdavirus lambda
Macromolecule	integrase (protein)

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1LLI \| pdb_00001lli	Download File View File

THE CRYSTAL STRUCTURE OF A MUTANT PROTEIN WITH ALTERED BUT IMPROVED HYDROPHOBIC CORE PACKING

Lim, W.A., Hodel, A., Sauer, R.T., Richards, F.M.

(1994) Proc Natl Acad Sci U S A 91: 423-427

Released	1994-08-31
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Lambdavirus lambda
Macromolecule	PROTEIN (LAMBDA REPRESSOR) (protein) DNA (5'-D(APAPTPAPCPCPAPCPTPGPGPCPGPGPTPGPA PTPAPT)-3') (nucleic acid) DNA (5'-D(TPAPTPAPTPCPAPCPCPGPCPCPAPGPTPGPG PTPAPT)-3') (nucleic acid)

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1LMB \| pdb_00001lmb	Download File View File

REFINED 1.8 ANGSTROM CRYSTAL STRUCTURE OF THE LAMBDA REPRESSOR-OPERATOR COMPLEX

Beamer, L.J., Pabo, C.O.

(1992) J Mol Biology 227: 177-196

Released	1991-11-05
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Lambdavirus lambda
Macromolecule	PROTEIN (LAMBDA REPRESSOR) (protein) DNA (5'-D(APAPTPAPCPCPAPCPTPGPGPCPGPGPTPGPA PTPAPT)-3') (nucleic acid) DNA (5'-D(TPAPTPAPTPCPAPCPCPGPCPCPAPGPTPGPG PTPAPT)-3') (nucleic acid)

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1LRP \| pdb_00001lrp	Download File View File

COMPARISON OF THE STRUCTURES OF CRO AND LAMBDA REPRESSOR PROTEINS FROM BACTERIOPHAGE LAMBDA

Pabo, C., Lewis, M.

(1983) J Mol Biology 169: 757-769

Released	1989-01-09
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Lambdavirus lambda
Macromolecule	LAMBDA REPRESSOR (protein)

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1LX8 \| pdb_00001lx8	Download File View File

Regulation of directionality in bacteriophage lambda site-specific recombination: structure of the Xis protein

Sam, M.D., Papagiannis, C., Connolly, K.M., Corselli, L., Iwahara, J., Lee, J., Phillips, M., Wojciak, J.M., Johnson, R.C., Clubb, R.T.

(2002) J Mol Biology 324: 791-805

Released	2003-06-10
Method	SOLUTION NMR
Organisms	Lambdavirus lambda
Macromolecule	Excisionase (protein)

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1ORC \| pdb_00001orc	Download File View File

CRO REPRESSOR INSERTION MUTANT K56-[DGEVK]

Albright, R.A., Mossing, M.C., Matthews, B.W.

(1996) Biochemistry 35: 735-742

Released	1996-12-23
Method	X-RAY DIFFRACTION 1.54 Å
Organisms	Lambdavirus lambda
Macromolecule	CRO REPRESSOR INSERTION MUTANT K56-[DGEVK] (protein)

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1P7D \| pdb_00001p7d	Download File View File

Crystal structure of the Lambda Integrase (residues 75-356) bound to DNA

Aihara, H., Kwon, H.J., Nunes-Duby, S.E., Landy, A., Ellenberger, T.

(2003) Mol Cell 12: 187-198

Released	2003-08-12
Method	X-RAY DIFFRACTION 2.95 Å
Organisms	Lambdavirus lambda
Macromolecule	Integrase (protein) 26-MER (nucleic acid) 5'-D(CPAPAPTPGPCPCPAPAPCPTPTP*T)-3' (nucleic acid)

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1PC6 \| pdb_00001pc6	Download File View File

Structural Genomics, NinB

Zhang, R., Beasley, S., Maxwell, K.L., Edwards, A.M., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

(2005) Proc Natl Acad Sci U S A 102: 11260-11265

Released	2004-01-20
Method	X-RAY DIFFRACTION 2.51 Å
Organisms	Lambdavirus lambda
Macromolecule	Protein ninB (protein)
Unique Ligands	BME

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1PER \| pdb_00001per	Download File View File

THE COMPLEX BETWEEN PHAGE 434 REPRESSION DNA-BINDING DOMAIN AND OPERATOR SITE OR3: STRUCTURAL DIFFERENCES BETWEEN CONSENSUS AND NON-CONSENSUS HALF-SITES

Rodgers, D.W., Harrison, S.C.

(1993) Structure 1: 227-240

Released	1994-01-31
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Phage 434
Macromolecule	PROTEIN (434 REPRESSOR) (protein) DNA (5'-D(APAPGPTPAPCPAPGPTPTPTPTPTPCPTPTPG PTPAPT)-3') (nucleic acid) DNA (5'-D(TPAPTPAPCPAPAPGPAPAPAPAPAPCPTPGPT PAPCPT)-3') (nucleic acid)