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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Gene Name = "STY1891"

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Search Summary

This query matches 15 Structures.

Refinements

Structure Determination Methodology

experimental (15)

Scientific Name of Source Organism

	Salmonella enterica subsp. enterica serovar Typhi (8)
	Salmonella enterica subsp. enterica serovar Typhi str. CT18 (7)
	Mus musculus (1)

Taxonomy

	Bacteria (15)
	Eukaryota (1)

Experimental Method

	X-RAY DIFFRACTION (14)
	ELECTRON MICROSCOPY (1)

Polymer Entity Type

Protein (15)

Refinement Resolution (Å)

	1.5 - 2.0 (7)
	2.0 - 2.5 (7)
	3.0 - 3.5 (1)

Release Date

	2010 - 2014 (3)
	2015 - 2019 (1)
	2020 - 2024 (11)

Enzyme Classification Name

	Hydrolases (1)
	Transferases (1)

Symmetry Type

	Cyclic (14)
	Asymmetric (1)

SCOP Classification

Alpha and beta proteins (a+b) (1)

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1 to 15 of 15 Structures

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4K6L \| pdb_00004k6l	Download File View File

Structure of Typhoid Toxin

Gao, X., Song, J., Galan, J.

(2013) Nature 499: 350-354

Released	2013-07-17
Method	X-RAY DIFFRACTION 2.393 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhi
Macromolecule	Cytolethal distending toxin subunit B homolog (protein) Putative pertussis-like toxin subunit (protein)
Unique Ligands	GOL

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4RHR \| pdb_00004rhr	Download File View File

Crystal structure of PltB

Gao, X., Wang, J., Galan, J.

(2014) Cell 159: 1290-1299

Released	2014-10-29
Method	X-RAY DIFFRACTION 2.079 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhi
Macromolecule	Putative pertussis-like toxin subunit (protein)
Unique Ligands	ACT

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4RHS \| pdb_00004rhs	Download File View File

Crystal structure of GD2 bound PltB

Gao, X., Wang, J., Galan, J.

(2014) Cell 159: 1290-1299

Released	2014-10-29
Method	X-RAY DIFFRACTION 1.9211 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhi
Macromolecule	Putative pertussis-like toxin subunit (protein)
Unique Ligands	ACT
Unique branched monosaccharides	GAL, SIA

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5WHT \| pdb_00005wht	Download File View File

Crystal structure of 3'SL bound PltB

Gao, X., Galan, J.E.

(2017) Nat Microbiol 2: 1592-1599

Released	2017-10-25
Method	X-RAY DIFFRACTION 1.932 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhi
Macromolecule	Putative pertussis-like toxin subunit (protein)
Unique Ligands	ACT, PEG, SIA
Unique branched monosaccharides	GAL, GLC, SIA

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6P4M \| pdb_00006p4m	Download File View File

Salmonella typhi PltB Homopentamer with Neu5Ac-alpha-2-3-Gal-beta-1-4-GlcNAc Glycans

Nguyen, T., Milano, S.K., Hillpot, E.C., Yang, Y.A., Song, J.

(2020) Cell Host Microbe 27: 937-949.e6

Released	2020-03-25
Method	X-RAY DIFFRACTION 1.802 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhi str. CT18
Macromolecule	Putative pertussis-like toxin subunit (protein)
Unique branched monosaccharides	GAL, NAG, SIA

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6P4N \| pdb_00006p4n	Download File View File

Salmonella typhi PltB Homopentamer with Neu5Ac-alpha-2-6-Gal-beta-1-4-GlcNAc Glycans

Nguyen, T., Milano, S.K., Hillpot, E.C., Yang, Y.A., Song, J.

(2020) Cell Host Microbe 27: 937-949.e6

Released	2020-03-25
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhi str. CT18
Macromolecule	Putative pertussis-like toxin subunit (protein)
Unique branched monosaccharides	GAL, NAG, SIA

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6P4P \| pdb_00006p4p	Download File View File

Salmonella typhi PltB Homopentamer N29K Mutant

Nguyen, T., Milano, S.K., Hillpot, E.C., Yang, Y.A., Song, J.

(2020) Cell Host Microbe 27: 937-949.e6

Released	2020-03-25
Method	X-RAY DIFFRACTION 2 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhi str. CT18
Macromolecule	Putative pertussis-like toxin subunit (protein)

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6P4Q \| pdb_00006p4q	Download File View File

Salmonella typhi PltB Homopentamer N29K Mutant with Neu5Ac-alpha-2-3-Gal-beta-1-4-GlcNAc Glycans

Nguyen, T., Milano, S.K., Hillpot, E.C., Yang, Y.A., Song, J.

(2020) Cell Host Microbe 27: 937-949.e6

Released	2020-03-25
Method	X-RAY DIFFRACTION 1.77 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhi str. CT18
Macromolecule	Putative pertussis-like toxin subunit (protein)
Unique branched monosaccharides	GAL, NAG, SIA

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6P4R \| pdb_00006p4r	Download File View File

Salmonella typhi PltB Homopentamer N29K Mutant with Neu5Ac-alpha-2-6-Gal-beta-1-4-GlcNAc glycans

Nguyen, T., Milano, S.K., Hillpot, E.C., Yang, Y.A., Song, J.

(2020) Cell Host Microbe 27: 937-949.e6

Released	2020-03-25
Method	X-RAY DIFFRACTION 1.87 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhi str. CT18
Macromolecule	Putative pertussis-like toxin subunit (protein)
Unique branched monosaccharides	GAL, NAG, SIA

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6P4S \| pdb_00006p4s	Download File View File

Salmonella typhi PltB Homopentamer T65I Mutant

Nguyen, T., Milano, S.K., Hillpot, E.C., Yang, Y.A., Song, J.

(2020) Cell Host Microbe 27: 937-949.e6

Released	2020-03-25
Method	X-RAY DIFFRACTION 2 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhi str. CT18
Macromolecule	Putative pertussis-like toxin subunit (protein)

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6P4T \| pdb_00006p4t	Download File View File

Salmonella typhi PltB Homopentamer T65I Mutant with Neu5Ac-alpha-2-3-Gal-beta-1-4-GlcNAc Glycans

Nguyen, T., Milano, S.K., Hillpot, E.C., Yang, Y.A., Song, J.

(2020) Cell Host Microbe 27: 937-949.e6

Released	2020-03-25
Method	X-RAY DIFFRACTION 2.17 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhi str. CT18
Macromolecule	Putative pertussis-like toxin subunit (protein)
Unique branched monosaccharides	GAL, NAG, SIA

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6TYN \| pdb_00006tyn	Download File View File

Salmonella Typhi PltB Homopentamer with Neu-5NAc-9OAc-alpha-2-3-Gal-beta-1-4-GlcNAc Glycans

Nguyen, T., Milano, S.K., Yang, Y.A., Song, J.

(2020) PLoS Pathog 16: e1008336-e1008336

Released	2020-02-12
Method	X-RAY DIFFRACTION 2.33 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhi
Macromolecule	Pertussis like toxin subunit B (protein)
Unique branched monosaccharides	5N6, GAL, NAG

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6TYO \| pdb_00006tyo	Download File View File

Salmonella Typhi PltB Homopentamer with Neu-5NAc-4OAc-alpha-2-3-Gal-beta-1-4-GlcNAc Glycans

Nguyen, T., Milano, S.K., Yang, Y.A., Song, J.

(2020) PLoS Pathog 16: e1008336-e1008336

Released	2020-02-12
Method	X-RAY DIFFRACTION 2.04 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhi
Macromolecule	Pertussis-like toxin subunit (protein)
Unique branched monosaccharides	GAL, NAG, PKM

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6TYQ \| pdb_00006tyq	Download File View File

Salmonella Typhi PltB Homopentamer with Neu-5NAc-9OAc-alpha-2-6-Gal-beta-1-4-GlcNAc Glycans

Nguyen, T., Milano, S.K., Yang, Y.A., Song, J.

(2020) PLoS Pathog 16: e1008336-e1008336

Released	2020-02-12
Method	X-RAY DIFFRACTION 1.88 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhi
Macromolecule	Pertussis-like toxin subunit B (protein)
Unique branched monosaccharides	5N6, GAL, NAG

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7K7I \| pdb_00007k7i	Download File View File

Density-fitted Model Structure of Antibody Variable Domains of TyTx4 in Complex with PltB pentamer of Typhoid Toxin

Nguyen, T., Feathers, J.R., Fromme, J.C., Song, J.

(2021) Cell Rep 36: 109654-109654

Released	2021-09-01
Method	ELECTRON MICROSCOPY 3.13 Å
Organisms	Mus musculus Salmonella enterica subsp. enterica serovar Typhi
Macromolecule	Fab Heavy Chain Variable Domain (protein) Fab Light Chain Variable Domain (protein) Putative pertussis-like toxin subunit (protein)

1 to 15 of 15 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

4K6L | pdb_00004k6l

Structure of Typhoid Toxin

4RHR | pdb_00004rhr

Crystal structure of PltB

4RHS | pdb_00004rhs

Crystal structure of GD2 bound PltB

5WHT | pdb_00005wht

Crystal structure of 3'SL bound PltB

6P4M | pdb_00006p4m

Salmonella typhi PltB Homopentamer with Neu5Ac-alpha-2-3-Gal-beta-1-4-GlcNAc Glycans

6P4N | pdb_00006p4n

Salmonella typhi PltB Homopentamer with Neu5Ac-alpha-2-6-Gal-beta-1-4-GlcNAc Glycans

6P4P | pdb_00006p4p

Salmonella typhi PltB Homopentamer N29K Mutant

6P4Q | pdb_00006p4q

Salmonella typhi PltB Homopentamer N29K Mutant with Neu5Ac-alpha-2-3-Gal-beta-1-4-GlcNAc Glycans

6P4R | pdb_00006p4r

Salmonella typhi PltB Homopentamer N29K Mutant with Neu5Ac-alpha-2-6-Gal-beta-1-4-GlcNAc glycans

6P4S | pdb_00006p4s

Salmonella typhi PltB Homopentamer T65I Mutant

6P4T | pdb_00006p4t

Salmonella typhi PltB Homopentamer T65I Mutant with Neu5Ac-alpha-2-3-Gal-beta-1-4-GlcNAc Glycans

6TYN | pdb_00006tyn

Salmonella Typhi PltB Homopentamer with Neu-5NAc-9OAc-alpha-2-3-Gal-beta-1-4-GlcNAc Glycans

6TYO | pdb_00006tyo

Salmonella Typhi PltB Homopentamer with Neu-5NAc-4OAc-alpha-2-3-Gal-beta-1-4-GlcNAc Glycans

6TYQ | pdb_00006tyq

Salmonella Typhi PltB Homopentamer with Neu-5NAc-9OAc-alpha-2-6-Gal-beta-1-4-GlcNAc Glycans

7K7I | pdb_00007k7i

Density-fitted Model Structure of Antibody Variable Domains of TyTx4 in Complex with PltB pentamer of Typhoid Toxin

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

4K6L | pdb_00004k6l

4RHR | pdb_00004rhr

4RHS | pdb_00004rhs

5WHT | pdb_00005wht

6P4M | pdb_00006p4m

6P4N | pdb_00006p4n

6P4P | pdb_00006p4p

6P4Q | pdb_00006p4q

6P4R | pdb_00006p4r

6P4S | pdb_00006p4s

6P4T | pdb_00006p4t

6TYN | pdb_00006tyn

6TYO | pdb_00006tyo

6TYQ | pdb_00006tyq

7K7I | pdb_00007k7i