RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: Structure Keywords HAS EXACT PHRASE "ANTIFUNGAL PROTEIN"

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Help

NOT

Count

Add Subquery

Chemical Attributes

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 96 Structures.

Refinements

Structure Determination Methodology

experimental (96)

Scientific Name of Source Organism

	Saccharomyces cerevisiae (11)
	Oryza sativa Japonica Group (10)
	Pyricularia oryzae (9)
	Penicillium rubens Wisconsin 54-1255 (6)
	Penicillium chrysogenum (5)
	Penicillium expansum (5)
	Archaeoprepona demophon (3)
	Streptomyces rugosporus (3)
	Aspergillus flavus NRRL3357 (2)
	Cicer arietinum (2)

More...

Taxonomy

	Eukaryota (86)
	Bacteria (7)
	Eukaryota (eukaryotes) (2)
	other sequences (1)

Experimental Method

	X-RAY DIFFRACTION (53)
	SOLUTION NMR (34)
	ELECTRON MICROSCOPY (9)

Polymer Entity Type

Protein (96)

Refinement Resolution (Å)

	0.5 - 1.0 (1)
	1.0 - 1.5 (15)
	1.5 - 2.0 (22)
	2.0 - 2.5 (10)
	2.5 - 3.0 (8)
	3.0 - 3.5 (2)
	3.5 - 4.0 (4)

Release Date

	1995 - 1999 (3)
	2000 - 2004 (15)
	2005 - 2009 (9)
	2010 - 2014 (5)
	2015 - 2019 (26)
	2020 - 2024 (37)
	2025 - 2029 (1)

Enzyme Classification Name

	Hydrolases (8)
	Transferases (9)
	Oxidoreductases (5)
	Isomerases (2)

Membrane Protein Annotation

	OPM (9)
	mpstruc (8)
	PDBTM (7)
	MemProtMD (5)

Symmetry Type

	Asymmetric (77)
	Cyclic (20)

SCOP Classification

	All beta proteins (12)
	Small proteins (15)
	All alpha proteins (1)
	Alpha and beta proteins (a+b) (1)
	Artifacts (1)

AllSelected

1 to 25 of 96 Structures

Page 1 of 4

Sort by

Explore in 3D

1AFP \| pdb_00001afp	Download File View File

SOLUTION STRUCTURE OF THE ANTIFUNGAL PROTEIN FROM ASPERGILLUS GIGANTEUS. EVIDENCE FOR DISULPHIDE CONFIGURATIONAL ISOMERISM

Campos-Olivas, R., Bruix, M., Santoro, J., Lacadena, J., Del Pozo, A.M., Gavilanes, J.G., Rico, M.

(1995) Biochemistry 34: 3009-3021

Released	1995-02-07
Method	SOLUTION NMR
Organisms	Aspergillus giganteus
Macromolecule	ANTIFUNGAL PROTEIN FROM ASPERGILLUS GIGANTEUS (protein)

Explore in 3D

1AUN \| pdb_00001aun	Download File View File

PATHOGENESIS-RELATED PROTEIN 5D FROM NICOTIANA TABACUM

Koiwa, H., Kato, H., Nakatsu, T., Oda, J., Yamada, Y., Sato, F.

(1999) J Mol Biology 286: 1137-1145

Released	1998-03-04
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Nicotiana tabacum
Macromolecule	PR-5D (protein)

Explore in 3D

1CNS \| pdb_00001cns	Download File View File

CRYSTAL STRUCTURE OF CHITINASE AT 1.91A RESOLUTION

Song, H.K., Suh, S.W.

(1996) Acta Crystallogr D Biol Crystallogr 52: 289-298

Released	1996-01-29
Method	X-RAY DIFFRACTION 1.91 Å
Organisms	Hordeum vulgare
Macromolecule	CHITINASE (protein)

Explore in 3D

1DKC \| pdb_00001dkc	Download File View File

SOLUTION STRUCTURE OF PAFP-S, AN ANTIFUNGAL PEPTIDE FROM THE SEEDS OF PHYTOLACCA AMERICANA

Wang, D.C., Gao, G.H., Shao, F., Dai, J.X., Wang, J.F.

(2001) Biochemistry 40: 10973-10978

Released	2000-12-13
Method	SOLUTION NMR
Organisms	Phytolacca americana
Macromolecule	ANTIFUNGAL PEPTIDE (protein)

Explore in 3D

1DU5 \| pdb_00001du5	Download File View File

THE CRYSTAL STRUCTURE OF ZEAMATIN.

Batalia, M.A., Monzingo, A.F., Ernst, S., Roberts, W., Robertus, J.D.

(1996) Nat Struct Biol 3: 19-23

Released	2000-02-02
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Zea mays
Macromolecule	ZEAMATIN (protein)

Explore in 3D

1E8A \| pdb_00001e8a	Download File View File

The three-dimensional structure of human S100A12

Moroz, O.V., Antson, A.A., Murshudov, G.N., Maitland, N.J., Dodson, G.G., Wilson, K.S., Skibshoj, I., Lukanidin, E.M., Bronstein, I.B.

(2001) Acta Crystallogr D Biol Crystallogr 57: 20

Released	2001-01-08
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Homo sapiens
Macromolecule	S100A12 (protein)
Unique Ligands	CA

Explore in 3D

1G6E \| pdb_00001g6e	Download File View File

ANTIFUNGAL PROTEIN FROM STREPTOMYCES TENDAE TU901, 30-CONFORMERS ENSEMBLE

Campos-Olivas, R., Bormann, C., Hoerr, I., Jung, G., Gronenborn, A.M.

(2001) J Mol Biology 308: 765-782

Released	2001-03-28
Method	SOLUTION NMR
Organisms	Streptomyces tendae
Macromolecule	ANTIFUNGAL PROTEIN (protein)

Explore in 3D

1GH5 \| pdb_00001gh5	Download File View File

ANTIFUNGAL PROTEIN FROM STREPTOMYCES TENDAE TU901, NMR AVERAGE STRUCTURE

Campos-Olivas, R., Bormann, C., Hoerr, I., Jung, G., Gronenborn, A.M.

(2001) J Mol Biology 308: 765-782

Released	2001-03-28
Method	SOLUTION NMR
Organisms	Streptomyces tendae
Macromolecule	ANTIFUNGAL PROTEIN (protein)

Explore in 3D

1I2U \| pdb_00001i2u	Download File View File

NMR SOLUTION STRUCTURES OF ANTIFUNGAL HELIOMICIN

Lamberty, M., Caille, A., Landon, C., Tassin-Moindrot, S., Hetru, C., Bulet, P., Vovelle, F.

(2001) Biochemistry 40: 11995-12003

Released	2002-02-12
Method	SOLUTION NMR
Organisms	Heliothis virescens
Macromolecule	DEFENSIN HELIOMICIN (protein)

Explore in 3D

1IYC \| pdb_00001iyc	Download File View File

Solution structure of antifungal peptide, scarabaecin

Hemmi, H., Ishibashi, J., Tomie, T., Yamakawa, M.

(2003) J Biological Chem 278: 22820-22827

Released	2003-06-24
Method	SOLUTION NMR
Organisms	Oryctes rhinoceros
Macromolecule	scarabaecin (protein)

Explore in 3D

1JKZ \| pdb_00001jkz	Download File View File

NMR Solution Structure of Pisum sativum defensin 1 (Psd1)

Almeida, M.S., Cabral, K.M.S., Kurtenbach, E., Almeida, F.C.L., Valente, A.P.

(2002) J Mol Biology 315: 749-757

Released	2002-02-06
Method	SOLUTION NMR
Organisms	Pisum sativum
Macromolecule	DEFENSE-RELATED PEPTIDE 1 (protein)

Explore in 3D

1OZZ \| pdb_00001ozz	Download File View File

NMR structure of antifungal defensin ARD1 from Archaeoprepona demophon

Landon, C., Guenneugues, M., Barbault, F., Legrain, M., Menin, L., Schott, V., Vovelle, F., Dimarcq, J.L.

(2004) Protein Sci 13: 703-713

Released	2004-03-09
Method	SOLUTION NMR
Organisms	Archaeoprepona demophon
Macromolecule	defensin ARD1 (protein)

Explore in 3D

1P00 \| pdb_00001p00	Download File View File

NMR structure of ETD151, mutant of the antifungal defensin ARD1 from Archaeoprepona demophon

Landon, C., Guenneugues, M., Barbault, F., Legrain, M., Menin, L., Schott, V., Vovelle, F., Dimarcq, J.L.

(2004) Protein Sci 13: 703-713

Released	2004-03-09
Method	SOLUTION NMR
Organisms	Archaeoprepona demophon
Macromolecule	defensin ARD1 (protein)

Explore in 3D

1P0A \| pdb_00001p0a	Download File View File

NMR structure of ETD135, mutant of the antifungal defensin ARD1 from Archaeoprepona demophon

Landon, C., Guenneugues, M., Barbault, F., Legrain, M., Menin, L., Schott, V., Vovelle, F., Dimarcq, J.L.

(2004) Protein Sci 13: 703-713

Released	2004-03-09
Method	SOLUTION NMR
Organisms	Archaeoprepona demophon
Macromolecule	DEFENSIN ARD1 (protein)

Explore in 3D

1P9G \| pdb_00001p9g	Download File View File

Crystal structure of a novel antifungal protein distinct with five disulfide bridges from Ecommia ulmoides Oliver at atomic resolution

Xiang, Y., Huang, R.H., Liu, X.Z., Wang, D.C.

(2004) J Struct Biol 148: 86-97

Released	2004-06-01
Method	X-RAY DIFFRACTION 0.84 Å
Organisms	Eucommia ulmoides
Macromolecule	EAFP 2 (protein)
Unique Ligands	ACT

Explore in 3D

1P9Z \| pdb_00001p9z	Download File View File

The Solution Structure of Antifungal Peptide Distinct With a Five-disulfide Motif from Eucommia ulmoides Oliver

Huang, R.H., Xiang, Y., Tu, G.Z., Zhang, Y., Wang, D.C.

(2004) Biochemistry 43: 6005-6012

Released	2004-05-25
Method	SOLUTION NMR
Organisms	Eucommia ulmoides
Macromolecule	Eucommia Antifungal peptide 2 (protein)

Explore in 3D

1PCV \| pdb_00001pcv	Download File View File

Crystal structure of osmotin, a plant antifungal protein

Min, K., Ha, S.C., Yun, D.-J., Bressan, R.A., Kim, K.K.

(2004) Proteins 54: 170-173

Released	2004-02-17
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Nicotiana tabacum
Macromolecule	osmotin (protein)

Explore in 3D

1Q3J \| pdb_00001q3j	Download File View File

Solution structure of ALO3: a new knottin-type antifungal peptide from the insect Acrocinus longimanus

Barbault, F., Landon, C., Guenneugues, M., Meyer, J.P., Schott, V., Dimarrcq, J.L., Vovelle, F.

(2003) Biochemistry 42: 14434-14442

Released	2003-12-23
Method	SOLUTION NMR
Organisms	Acrocinus longimanus
Macromolecule	ALO3 (protein)

Explore in 3D

1XD5 \| pdb_00001xd5	Download File View File

Crystal structures of novel monomeric monocot mannose-binding lectins from Gastrodia elata

Liu, W., Yang, N., Wang, M., Huang, R.H., Hu, Z., Wang, D.C.

(2005) J Biological Chem 280: 14865-14876

Released	2005-01-11
Method	X-RAY DIFFRACTION 2 Å
Organisms	Gastrodia elata
Macromolecule	antifungal protein GAFP-1 (protein)
Unique Ligands	SO4

Explore in 3D

1XD6 \| pdb_00001xd6	Download File View File

Crystal structures of novel monomeric monocot mannose-binding lectins from Gastrodia elata

Liu, W., Yang, N., Wang, M., Huang, R.H., Hu, Z., Wang, D.C.

(2005) J Biological Chem 280: 14865-14876

Released	2005-01-11
Method	X-RAY DIFFRACTION 2 Å
Organisms	Gastrodia elata
Macromolecule	gastrodianin-4 (protein)
Unique Ligands	SO4

Explore in 3D

1Z3Q \| pdb_00001z3q	Download File View File

Resolution of the structure of the allergenic and antifungal banana fruit thaumatin-like protein at 1.7A

Leone, P., Menu-Bouaouiche, L., Peumans, W.J., Barre, A., Payan, F., Roussel, A., Van Damme, E.J.M., Rouge, P.

(2006) Biochimie 88: 45-52

Released	2006-01-24
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Musa acuminata
Macromolecule	Thaumatin-like Protein (protein)
Unique Ligands	EDO

Explore in 3D

2E2F \| pdb_00002e2f	Download File View File

Solution structure of DSP

Kouno, T., Mizuguchi, M., Suzuki, K., Kawano, K.

(2007) Biochemistry 46: 13733-13741

Released	2007-11-13
Method	SOLUTION NMR
Organisms	Gastrophysa atrocyanea
Macromolecule	Diapausin (protein)

Explore in 3D

2I0W \| pdb_00002i0w	Download File View File

Crystal structure analysis of NP24-I, a thaumatin-like protein

Chakrabarti, C., Ghosh, R.

(2008) Planta 228: 883-890

Released	2007-07-24
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Solanum lycopersicum
Macromolecule	Protein NP24 (protein)
Unique Ligands	CL

Explore in 3D

2KCN \| pdb_00002kcn	Download File View File

Solution structure of the antifungal protein PAF from Penicillium chrysogenum

Batta, G., Barna, T., Gaspari, Z., Sandor, S., Kover, K.E., Binder, U., Sarg, B., Kaiserer, L., Chhillar, A.K., Eigentler, A., Leiter, E., Hegedus, N., Pocsi, I., Lindner, H., Marx, F.

(2009) FEBS J 276: 2875-2890

Released	2009-07-21
Method	SOLUTION NMR
Organisms	Penicillium chrysogenum
Macromolecule	Antifungal protein (protein)

Explore in 3D

2LR3 \| pdb_00002lr3	Download File View File

Solution structure of the anti-fungal defensin DEF4 (MTR_8g070770) from Medicago truncatula (barrel clover)

Buchko, G.W., Smith, T.J., Shah, D.M.

(2013) PLoS One 8: e82485-e82485

Released	2012-09-26
Method	SOLUTION NMR
Organisms	Medicago truncatula
Macromolecule	Defensin (protein)

1 to 25 of 96 Structures

Page 1 of 4

Sort by

About
About Us
Citing Us
Publications
Team
Careers
Usage & Privacy

Support
Contact Us
Help
Website FAQ
Glossary
Service Status

RCSB PDB is hosted by

RCSB PDB is a member of the

RCSB Partners
Nucleic Acid Knowledgebase

wwPDB Partners
RCSB PDB
PDBe
PDBj
BMRB
EMDB

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

Prepare Data

Validate Data

Deposit Data

Help and Resources

Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1AFP | pdb_00001afp

1AUN | pdb_00001aun

1CNS | pdb_00001cns

1DKC | pdb_00001dkc

1DU5 | pdb_00001du5

1E8A | pdb_00001e8a

1G6E | pdb_00001g6e

1GH5 | pdb_00001gh5

1I2U | pdb_00001i2u

1IYC | pdb_00001iyc

1JKZ | pdb_00001jkz

1OZZ | pdb_00001ozz

1P00 | pdb_00001p00

1P0A | pdb_00001p0a

1P9G | pdb_00001p9g

1P9Z | pdb_00001p9z

1PCV | pdb_00001pcv

1Q3J | pdb_00001q3j

1XD5 | pdb_00001xd5

1XD6 | pdb_00001xd6

1Z3Q | pdb_00001z3q

2E2F | pdb_00002e2f

2I0W | pdb_00002i0w

2KCN | pdb_00002kcn

2LR3 | pdb_00002lr3