Download MendeleyStructural and biochemical characterization of ClfB:ligand interactions
Ganesh, V.K., Barbu, E.M., Deivanayagam, C.C.S., Le, B., Anderson, A.S., Matsuka, Y., Lin, S.L., Foster, T.F., Narayana, S.V.L., Hook, M.To be published.
3AU0 | pdb_00003au0
Structural and biochemical characterization of ClfB:ligand interactions
- PDB DOI: https://doi.org/10.2210/pdb3AU0/pdb
- Classification: CELL ADHESION
- Organism(s): Staphylococcus aureus subsp. aureus N315
- Expression System: Escherichia coli
- Mutation(s): Yes
- Deposited: 2011-01-28 Released: 2011-05-04
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.45 Å
- R-Value Free: 0.279 (Depositor), 0.290 (DCC)
- R-Value Work: 0.203 (Depositor), 0.210 (DCC)
- R-Value Observed: 0.203 (Depositor)
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Clumping factor B | 339 | Staphylococcus aureus subsp. aureus N315 | Mutation(s): 1 Gene Names: clfB, SA2423 |  | |
UniProt | |||||
Find proteins for Q7A382 (Staphylococcus aureus (strain N315)) Explore Q7A382 Go to UniProtKB: Q7A382 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q7A382 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| MG Query on MG | B [auth A], C [auth A] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.45 Å
- R-Value Free: 0.279 (Depositor), 0.290 (DCC)
- R-Value Work: 0.203 (Depositor), 0.210 (DCC)
- R-Value Observed: 0.203 (Depositor)
Space Group: P 43 21 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 96.36 | α = 90 |
| b = 96.36 | β = 90 |
| c = 84.13 | γ = 90 |
| Software Name | Purpose |
|---|---|
| SOLVE | phasing |
| CNS | refinement |
Entry History
Deposition Data
- Released Date: 2011-05-04 Deposition Author(s): Ganesh, V.K., Barbu, E.M., Deivanayagam, C.C.S., Le, B., Anderson, A.S., Matsuka, Y., Lin, S.L., Foster, T.F., Narayana, S.V.L., Hook, M.
Revision History (Full details and data files)
- Version 1.0: 2011-05-04
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance - Version 1.2: 2024-03-13
Changes: Data collection, Database references, Derived calculations
