7F47 | pdb_00007f47

Deposited: 2021-06-17 Released: 2022-06-22
Deposition Author(s): Nishimura, M., Hirano, H., Kobayashi, K., Gill, C.P., Phan, C.N.K., Kise, Y., Kusakizako, T., Yamashita, K., Ito, Y., Roy, H., Nishizawa, T., Nureki, O.

Experimental Data Snapshot

Starting Model: experimental
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wwPDB Validation 3D Report Full Report

This is version 1.2 of the entry. See complete history.

Literature

Nishimura, M.

To be published.

Macromolecule Content

Macromolecules

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(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Hypothetical conserved protein	A	867	Rhizobium etli CFN 42	Mutation(s): 0 Gene Names: RHE_CH03486 Membrane Entity: Yes
UniProt
Find proteins for Q2K4J4 (Rhizobium etli (strain ATCC 51251 / DSM 11541 / JCM 21823 / NBRC 15573 / CFN 42)) Explore Q2K4J4 Go to UniProtKB: Q2K4J4
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q2K4J4
Sequence Annotations Expand
Reference Sequence LOADING

Small Molecules

Ligands 2 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
1K1 (Subject of Investigation/LOI) Query on 1K1 Download Ideal Coordinates CCD File SDF format, chain C [auth A] MOL2 format, chain C [auth A] mmCIF format, chain C [auth A]	C [auth A]	[(2R)-1-[[(2R)-3-[(2S)-2,6-bis(azanyl)hexanoyl]oxy-2-oxidanyl-propoxy]-oxidanyl-phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (E)-octadec-9-enoate C₄₆ H₈₉ N₂ O₁₁ P RAZCYGDQUBGNGD-FLVJYVQPSA-N		Interactions Focus chain C [auth A] Interactions & Density Focus chain C [auth A]
PGW (Subject of Investigation/LOI) Query on PGW Download Ideal Coordinates CCD File SDF format, chain B [auth A] MOL2 format, chain B [auth A] mmCIF format, chain B [auth A]	B [auth A]	(1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate C₄₀ H₇₇ O₁₀ P PAZGBAOHGQRCBP-HGWHEPCSSA-N		Interactions Focus chain B [auth A] Interactions & Density Focus chain B [auth A]