1N4S
Protein Geranylgeranyltransferase type-I Complexed with GGPP and a Geranylgeranylated KKKSKTKCVIL Peptide Product
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Protein prenylyltransferase | 8038634 | 3001312 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Protein prenylyltransferase | 8038634 | 3001312 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Protein prenylyltransferase | 8038634 | 3001312 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | Protein prenylyltransferase | 8038634 | 3001312 | SCOP2B (2022-06-29) |
I | SCOP2B Superfamily | Protein prenylyltransferase | 8038634 | 3001312 | SCOP2B (2022-06-29) |
K | SCOP2B Superfamily | Protein prenylyltransferase | 8038634 | 3001312 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Terpenoid cyclases/Protein prenyltransferases | 8084558 | 3001024 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Terpenoid cyclases/Protein prenyltransferases | 8084558 | 3001024 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Terpenoid cyclases/Protein prenyltransferases | 8084558 | 3001024 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | Terpenoid cyclases/Protein prenyltransferases | 8084558 | 3001024 | SCOP2B (2022-06-29) |
L | SCOP2B Superfamily | Terpenoid cyclases/Protein prenyltransferases | 8084558 | 3001024 | SCOP2B (2022-06-29) |
J | SCOP2B Superfamily | Terpenoid cyclases/Protein prenyltransferases | 8084558 | 3001024 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PPTA | e1n4sA1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PPTA | ECOD (1.6) |
C | PPTA | e1n4sC1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PPTA | ECOD (1.6) |
E | PPTA | e1n4sE1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PPTA | ECOD (1.6) |
G | PPTA | e1n4sG1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PPTA | ECOD (1.6) |
I | PPTA | e1n4sI1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PPTA | ECOD (1.6) |
K | PPTA | e1n4sK1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PPTA | ECOD (1.6) |
B | SQHop_cyclase_C | e1n4sB1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: alpha/alpha toroid (From Topology) | T: alpha/alpha toroid | F: SQHop_cyclase_C | ECOD (1.6) |
D | SQHop_cyclase_C | e1n4sD1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: alpha/alpha toroid (From Topology) | T: alpha/alpha toroid | F: SQHop_cyclase_C | ECOD (1.6) |
F | SQHop_cyclase_C | e1n4sF1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: alpha/alpha toroid (From Topology) | T: alpha/alpha toroid | F: SQHop_cyclase_C | ECOD (1.6) |
H | SQHop_cyclase_C | e1n4sH1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: alpha/alpha toroid (From Topology) | T: alpha/alpha toroid | F: SQHop_cyclase_C | ECOD (1.6) |
L | SQHop_cyclase_C | e1n4sL1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: alpha/alpha toroid (From Topology) | T: alpha/alpha toroid | F: SQHop_cyclase_C | ECOD (1.6) |
J | SQHop_cyclase_C | e1n4sJ1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: alpha/alpha toroid (From Topology) | T: alpha/alpha toroid | F: SQHop_cyclase_C | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01239 | Protein prenyltransferase alpha subunit repeat (PPTA) | Protein prenyltransferase alpha subunit repeat | - | Repeat | |
PF00432 | Prenyltransferase alpha-alpha toroid domain (Prenyltrans) | Prenyltransferase and squalene oxidase repeat | - | Repeat | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR002088 | Protein prenyltransferase, alpha subunit | Repeat | |
IPR045089 | Prenyltransferase subunit beta | Family | |
IPR008930 | Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid | Homologous Superfamily | |
IPR041960 | Geranylgeranyl transferase type-1 subunit beta | Family | |
IPR001330 | Prenyltransferase alpha-alpha toroid domain | Domain | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
IPR005225 | Small GTP-binding domain | Domain | |
IPR020849 | Small GTPase, Ras-type | Family | |
IPR001806 | Small GTPase | Family |