Hetero-tetrameric L27 (Lin-2, Lin-7) domain complexes as organization platforms of supra-molecular assemblies
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1rsoa_ | All alpha proteins | L27 domain | L27 domain | L27 domain | Presynaptic protein sap97 | Norway rat (Rattus norvegicus ) [TaxId: 10116 ], | SCOPe (2.08) |
C | d1rsoc_ | All alpha proteins | L27 domain | L27 domain | L27 domain | Presynaptic protein sap97 | Norway rat (Rattus norvegicus ) [TaxId: 10116 ], | SCOPe (2.08) |
B | d1rsob_ | All alpha proteins | L27 domain | L27 domain | L27 domain | Peripheral plasma membrane protein cask | Norway rat (Rattus norvegicus ) [TaxId: 10116 ], | SCOPe (2.08) |
D | d1rsod_ | All alpha proteins | L27 domain | L27 domain | L27 domain | Peripheral plasma membrane protein cask | Norway rat (Rattus norvegicus ) [TaxId: 10116 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | L27 domain | 8028516 | 4000688 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | L27 domain | 8040895 | 3001054 | SCOP2 (2022-06-29) |
C | SCOP2B Superfamily | L27 domain | 8040895 | 3001054 | SCOP2B (2022-06-29) |
B | SCOP2 Family | L27 domain | 8028519 | 4000688 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | L27 domain | 8040898 | 3001054 | SCOP2 (2022-06-29) |
D | SCOP2B Superfamily | L27 domain | 8040898 | 3001054 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | L27_1 | e1rsoA1 | A: alpha duplicates or obligate multimers | X: L27 domain (From Topology) | H: L27 domain (From Topology) | T: L27 domain | F: L27_1 | ECOD (1.6) |
C | L27_1 | e1rsoC1 | A: alpha duplicates or obligate multimers | X: L27 domain (From Topology) | H: L27 domain (From Topology) | T: L27 domain | F: L27_1 | ECOD (1.6) |
B | L27_1 | e1rsoB1 | A: alpha duplicates or obligate multimers | X: L27 domain (From Topology) | H: L27 domain (From Topology) | T: L27 domain | F: L27_1 | ECOD (1.6) |
D | L27_1 | e1rsoD1 | A: alpha duplicates or obligate multimers | X: L27 domain (From Topology) | H: L27 domain (From Topology) | T: L27 domain | F: L27_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.287.470 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | Helix hairpin bin | CATH (4.3.0) |
C | 1.10.287.470 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | Helix hairpin bin | CATH (4.3.0) |
B | 1.10.287.650 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | L27 domain | CATH (4.3.0) |
D | 1.10.287.650 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | L27 domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF09058 | L27_1 (L27_1) | L27_1 | The L27 domain is a protein interaction module that exists in a large family of scaffold proteins, functioning as an organisation centre of large protein assemblies required for the establishment and maintenance of cell polarity. L27 domains form spe ... | Domain | |
PF02828 | L27 domain (L27) | L27 domain | The L27 domain is found in receptor targeting proteins Lin-2 and Lin-7. | Domain |