2GXF | pdb_00002gxf

X-Ray Crystal Structure of Protein YybH from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR506.

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad2gxfa1 Alpha and beta proteins (a+b) Cystatin-like NTF2-like YybH-like Hypothetical protein YybH (Bacillus subtilis ) [TaxId: 1423 ], SCOPe (2.08)
Bd2gxfb_ Alpha and beta proteins (a+b) Cystatin-like NTF2-like YybH-like Hypothetical protein YybH (Bacillus subtilis ) [TaxId: 1423 ], SCOPe (2.08)
Cd2gxfc_ Alpha and beta proteins (a+b) Cystatin-like NTF2-like YybH-like Hypothetical protein YybH (Bacillus subtilis ) [TaxId: 1423 ], SCOPe (2.08)
Dd2gxfd_ Alpha and beta proteins (a+b) Cystatin-like NTF2-like YybH-like Hypothetical protein YybH (Bacillus subtilis ) [TaxId: 1423 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyYybH-like 8021753 4001656 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyNTF2-like 8034133 3000472 SCOP2 (2022-06-29)
BSCOP2B SuperfamilyNTF2-like 8034133 3000472 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyNTF2-like 8034133 3000472 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyNTF2-like 8034133 3000472 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ASnoaL_3e2gxfA1 A: a+b two layersX: Cystatin-likeH: NTF2-like (From Topology)T: NTF2-likeF: SnoaL_3ECOD (1.6)
BSnoaL_3e2gxfB1 A: a+b two layersX: Cystatin-likeH: NTF2-like (From Topology)T: NTF2-likeF: SnoaL_3ECOD (1.6)
CSnoaL_3e2gxfC1 A: a+b two layersX: Cystatin-likeH: NTF2-like (From Topology)T: NTF2-likeF: SnoaL_3ECOD (1.6)
DSnoaL_3e2gxfD1 A: a+b two layersX: Cystatin-likeH: NTF2-like (From Topology)T: NTF2-likeF: SnoaL_3ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.10.450.50 Alpha Beta Roll Nuclear Transport Factor 2 Chain: A,CATH (4.3.0)
B3.10.450.50 Alpha Beta Roll Nuclear Transport Factor 2 Chain: A,CATH (4.3.0)
C3.10.450.50 Alpha Beta Roll Nuclear Transport Factor 2 Chain: A,CATH (4.3.0)
D3.10.450.50 Alpha Beta Roll Nuclear Transport Factor 2 Chain: A,CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF13474SnoaL-like domain (SnoaL_3)SnoaL-like domainThis family contains a large number of proteins that share the SnoaL fold. Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR032710NTF2-like domain superfamilyHomologous Superfamily
A, B, C, D
IPR037401SnoaL-like domainDomain