Crystal structure of a ternary ligand-receptor complex of BMP-2
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2h62a_ | Small proteins | Cystine-knot cytokines | Cystine-knot cytokines | Transforming growth factor (TGF)-beta | Bone morphogenetic protein-2 (BMP-2) | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d2h62b_ | Small proteins | Cystine-knot cytokines | Cystine-knot cytokines | Transforming growth factor (TGF)-beta | Bone morphogenetic protein-2 (BMP-2) | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
C | d2h62c_ | Small proteins | Snake toxin-like | Snake toxin-like | Extracellular domain of cell surface receptors | automated matches | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
D | d2h62d_ | Small proteins | Snake toxin-like | Snake toxin-like | Extracellular domain of cell surface receptors | BMP receptor Ia ectodomain | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Transforming growth factor (TGF)-beta | 8029785 | 4003433 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Cystine-knot cytokines | 8042164 | 3000846 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Cystine-knot cytokines | 8042164 | 3000846 | SCOP2B (2022-06-29) |
C | SCOP2 Family | Extracellular domain of cell surface receptors | 8029788 | 4003329 | SCOP2 (2022-06-29) |
C | SCOP2 Superfamily | Snake toxin-like | 8042167 | 3000545 | SCOP2 (2022-06-29) |
D | SCOP2 Family | Extracellular domain of cell surface receptors | 8029787 | 4003329 | SCOP2 (2022-06-29) |
D | SCOP2 Superfamily | Snake toxin-like | 8042166 | 3000545 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | TGF_beta | e2h62A1 | A: few secondary structure elements | X: Cystine-knot cytokines (From Topology) | H: Cystine-knot cytokines (From Topology) | T: Cystine-knot cytokines | F: TGF_beta | ECOD (1.6) |
B | TGF_beta | e2h62B1 | A: few secondary structure elements | X: Cystine-knot cytokines (From Topology) | H: Cystine-knot cytokines (From Topology) | T: Cystine-knot cytokines | F: TGF_beta | ECOD (1.6) |
C | Activin_recp | e2h62C1 | A: few secondary structure elements | X: Snake toxin-like (From Topology) | H: Snake toxin-like (From Topology) | T: Snake toxin-like | F: Activin_recp | ECOD (1.6) |
D | Activin_recp | e2h62D1 | A: few secondary structure elements | X: Snake toxin-like (From Topology) | H: Snake toxin-like (From Topology) | T: Snake toxin-like | F: Activin_recp | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.10.90.10 | Mainly Beta | Ribbon | Cystine Knot Cytokines, subunit B | Cystine-knot cytokines | CATH (4.3.0) |
B | 2.10.90.10 | Mainly Beta | Ribbon | Cystine Knot Cytokines, subunit B | Cystine-knot cytokines | CATH (4.3.0) |
C | 2.10.60.10 | Mainly Beta | Ribbon | CD59 | CD59 | CATH (4.3.0) |
D | 2.10.60.10 | Mainly Beta | Ribbon | CD59 | CD59 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00019 | Transforming growth factor beta like domain (TGF_beta) | Transforming growth factor beta like domain | Domain | ||
PF01064 | Activin types I and II receptor domain (Activin_recp) | Activin types I and II receptor domain | This Pfam entry consists of both TGF-beta receptor types. This is an alignment of the hydrophilic cysteine-rich ligand-binding domains, Both receptor types, (type I and II) posses a 9 amino acid cysteine box, with the the consensus CCX{4-5}CN. The t ... | Domain | |
PF01064 | Activin types I and II receptor domain (Activin_recp) | Activin types I and II receptor domain | This Pfam entry consists of both TGF-beta receptor types. This is an alignment of the hydrophilic cysteine-rich ligand-binding domains, Both receptor types, (type I and II) posses a 9 amino acid cysteine box, with the the consensus CCX{4-5}CN. The t ... | Domain |