Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad2i6ea1 Alpha and beta proteins (a/b) Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Hypothetical protein DR0370 (Deinococcus radiodurans ) [TaxId: 1299 ], SCOPe (2.08)
Cd2i6ec_ Alpha and beta proteins (a/b) Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Hypothetical protein DR0370 (Deinococcus radiodurans ) [TaxId: 1299 ], SCOPe (2.08)
Dd2i6ed_ Alpha and beta proteins (a/b) Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Hypothetical protein DR0370 (Deinococcus radiodurans ) [TaxId: 1299 ], SCOPe (2.08)
Ed2i6ee_ Alpha and beta proteins (a/b) Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Hypothetical protein DR0370 (Deinococcus radiodurans ) [TaxId: 1299 ], SCOPe (2.08)
Fd2i6ef_ Alpha and beta proteins (a/b) Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Hypothetical protein DR0370 (Deinococcus radiodurans ) [TaxId: 1299 ], SCOPe (2.08)
Gd2i6eg_ Alpha and beta proteins (a/b) Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Hypothetical protein DR0370 (Deinococcus radiodurans ) [TaxId: 1299 ], SCOPe (2.08)
Bd2i6eb_ Alpha and beta proteins (a/b) Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Hypothetical protein DR0370 (Deinococcus radiodurans ) [TaxId: 1299 ], SCOPe (2.08)
Hd2i6eh_ Alpha and beta proteins (a/b) Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Hypothetical protein DR0370 (Deinococcus radiodurans ) [TaxId: 1299 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyPhosphate binding protein-like 8022012 4000229 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyType 2 solute binding protein-like 8034392 3000083 SCOP2 (2022-06-29)
CSCOP2B SuperfamilyType 2 solute binding protein-like 8034392 3000083 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyType 2 solute binding protein-like 8034392 3000083 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyType 2 solute binding protein-like 8034392 3000083 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyType 2 solute binding protein-like 8034392 3000083 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyType 2 solute binding protein-like 8034392 3000083 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyType 2 solute binding protein-like 8034392 3000083 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyType 2 solute binding protein-like 8034392 3000083 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AVitK2_biosynth_2nde2i6eA3 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: VitK2_biosynth_2ndECOD (1.6)
AVitK2_biosynth_1ste2i6eA2 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: VitK2_biosynth_1stECOD (1.6)
CVitK2_biosynth_2nde2i6eC2 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: VitK2_biosynth_2ndECOD (1.6)
CVitK2_biosynth_1ste2i6eC1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: VitK2_biosynth_1stECOD (1.6)
DVitK2_biosynth_2nde2i6eD1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: VitK2_biosynth_2ndECOD (1.6)
DVitK2_biosynth_1ste2i6eD2 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: VitK2_biosynth_1stECOD (1.6)
EVitK2_biosynth_2nde2i6eE1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: VitK2_biosynth_2ndECOD (1.6)
EVitK2_biosynth_1ste2i6eE2 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: VitK2_biosynth_1stECOD (1.6)
FVitK2_biosynth_2nde2i6eF1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: VitK2_biosynth_2ndECOD (1.6)
FVitK2_biosynth_1ste2i6eF2 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: VitK2_biosynth_1stECOD (1.6)
GVitK2_biosynth_2nde2i6eG2 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: VitK2_biosynth_2ndECOD (1.6)
GVitK2_biosynth_1ste2i6eG1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: VitK2_biosynth_1stECOD (1.6)
BVitK2_biosynth_2nde2i6eB1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: VitK2_biosynth_2ndECOD (1.6)
BVitK2_biosynth_1ste2i6eB2 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: VitK2_biosynth_1stECOD (1.6)
HVitK2_biosynth_2nde2i6eH2 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: VitK2_biosynth_2ndECOD (1.6)
HVitK2_biosynth_1ste2i6eH1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: VitK2_biosynth_1stECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF02621Menaquinone biosynthesis (VitK2_biosynth)Menaquinone biosynthesisThis family includes two enzymes which are involved in menaquinone biosynthesis. One which catalyses the conversion of cyclic de-hypoxanthine futalosine to 1,4-dihydroxy-6-naphthoate, and one which may be involved in the conversion of chorismate to f ...This family includes two enzymes which are involved in menaquinone biosynthesis. One which catalyses the conversion of cyclic de-hypoxanthine futalosine to 1,4-dihydroxy-6-naphthoate, and one which may be involved in the conversion of chorismate to futalosine [1]. These enzymes comprise two domains with alpha/beta structures, a large domain and a small domain. A pocket between the two domains may form the active site, a conserved histidine located within this pocket could be the catalytic base [2].
Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR030868Chorismate dehydrataseFamily
A, B, C, D, E
IPR003773Menaquinone biosynthesis enzymeFamily