3OD9 | pdb_00003od9

Crystal structure of PliI-Ah, periplasmic lysozyme inhibitor of I-type lysozyme from Aeromonas hydrophyla

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	PliI-like	8092831	3002628	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	PliI-like	8092831	3002628	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	PliI-like	8092831	3002628	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PliI	e3od9A1	A: beta duplicates or obligate multimers	X: periplasmic lysozyme inhibitor of I-type lysozyme-like	H: periplasmic lysozyme inhibitor of I-type lysozyme (From Topology)	T: periplasmic lysozyme inhibitor of I-type lysozyme	F: PliI	ECOD (1.6)
B	PliI	e3od9B1	A: beta duplicates or obligate multimers	X: periplasmic lysozyme inhibitor of I-type lysozyme-like	H: periplasmic lysozyme inhibitor of I-type lysozyme (From Topology)	T: periplasmic lysozyme inhibitor of I-type lysozyme	F: PliI	ECOD (1.6)
C	PliI	e3od9C1	A: beta duplicates or obligate multimers	X: periplasmic lysozyme inhibitor of I-type lysozyme-like	H: periplasmic lysozyme inhibitor of I-type lysozyme (From Topology)	T: periplasmic lysozyme inhibitor of I-type lysozyme	F: PliI	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.40.128.460	Mainly Beta	Beta Barrel	Lipocalin	Periplasmic lysozyme inhibitor of I-type lysozyme	CATH (4.3.0)
B	2.40.128.460	Mainly Beta	Beta Barrel	Lipocalin	Periplasmic lysozyme inhibitor of I-type lysozyme	CATH (4.3.0)
C	2.40.128.460	Mainly Beta	Beta Barrel	Lipocalin	Periplasmic lysozyme inhibitor of I-type lysozyme	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C	PF16743	Periplasmic lysozyme inhibitor of I-type lysozyme (PliI)	Periplasmic lysozyme inhibitor of I-type lysozyme		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C	Putative exported protein	cation binding ion binding binding metal ion binding small molecule binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C	IPR031948	Periplasmic lysozyme inhibitor, I-type	Family
A, B, C	IPR038643	PliI superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.