Structure of TRAF5 and TRAF6 RING Hetero dimer
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2B Superfamily | RING/U-box like | 8053202 | 3000160 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | beta-beta-alpha zinc fingers | 8053196 | 3001077 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | RING/U-box like | 8053202 | 3000160 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | zf-C3HC4_2 | e7l3lA2 | A: few secondary structure elements | X: RING/U-box-like | H: RING/U-box-like | T: RING/U-box | F: zf-C3HC4_2 | ECOD (1.6) |
A | F_UNCLASSIFIED | e7l3lA3 | A: few secondary structure elements | X: beta-beta-alpha zinc fingers | H: beta-beta-alpha zinc fingers (From Topology) | T: beta-beta-alpha zinc fingers | F: F_UNCLASSIFIED | ECOD (1.6) |
C | zf-C3HC4_2 | e7l3lC2 | A: few secondary structure elements | X: RING/U-box-like | H: RING/U-box-like | T: RING/U-box | F: zf-C3HC4_2 | ECOD (1.6) |
C | F_UNCLASSIFIED | e7l3lC3 | A: few secondary structure elements | X: beta-beta-alpha zinc fingers | H: beta-beta-alpha zinc fingers (From Topology) | T: beta-beta-alpha zinc fingers | F: F_UNCLASSIFIED | ECOD (1.6) |
B | zf-C3HC4 | e7l3lB2 | A: few secondary structure elements | X: RING/U-box-like | H: RING/U-box-like | T: RING/U-box | F: zf-C3HC4 | ECOD (1.6) |
B | zf-RAG1_like | e7l3lB1 | A: few secondary structure elements | X: beta-beta-alpha zinc fingers | H: beta-beta-alpha zinc fingers (From Topology) | T: beta-beta-alpha zinc fingers | F: zf-RAG1_like | ECOD (1.6) |
D | zf-C3HC4 | e7l3lD1 | A: few secondary structure elements | X: RING/U-box-like | H: RING/U-box-like | T: RING/U-box | F: zf-C3HC4 | ECOD (1.6) |
D | zf-RAG1_like | e7l3lD2 | A: few secondary structure elements | X: beta-beta-alpha zinc fingers | H: beta-beta-alpha zinc fingers (From Topology) | T: beta-beta-alpha zinc fingers | F: zf-RAG1_like | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 3.30.40.10 | Alpha Beta | 2-Layer Sandwich | Herpes Virus-1 | Zinc/RING finger domain, C3HC4 (zinc finger) | CATH (utative) |
D | 3.30.40.10 | Alpha Beta | 2-Layer Sandwich | Herpes Virus-1 | Zinc/RING finger domain, C3HC4 (zinc finger) | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF21363 | TNF receptor-associated factor 2/3/5, RING domain (TRAF3_RING) | TNF receptor-associated factor 2/3/5, RING domain | This is the RING domain of TNF receptor-associated factors 2/3/5 (TRAFs2/3/5). The RING domain is common among ubiquitin E3 ligases and it is found at the N-terminal of TRAFs, followed by a series of zinc fingers and a C-terminal MATH/TRAF domain. Th ... | Domain | |
PF02176 | TRAF-type zinc finger (zf-TRAF) | TRAF-type zinc finger | - | Family | |
PF13923 | Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_2) | Zinc finger, C3HC4 type (RING finger) | Domain |