7QJ6 | pdb_00007qj6

Structure of recombinant human gamma-Tubulin Ring Complex 10-spoked assembly intermediate (spokes 3-12, substoichiometric spokes 13-14)


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
J [auth I]SCOP2B SuperfamilyGCP component repeat-like 8090499 3002440 SCOP2B (2022-06-29)
J [auth I]SCOP2B SuperfamilyGCP component repeat-like 8090497 3002440 SCOP2B (2022-06-29)
L [auth K]SCOP2B SuperfamilyGCP component repeat-like 8090499 3002440 SCOP2B (2022-06-29)
L [auth K]SCOP2B SuperfamilyGCP component repeat-like 8090497 3002440 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth e]Actin_1ste7qj6e2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_1stECOD (1.6)
A [auth e]Actin_2nde7qj6e1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_2ndECOD (1.6)
J [auth I]Spc97_Spc98e7qj6I1 A: alpha complex topologyX: gamma-tubulin complex protein 4 (GCP4) (From Topology)H: gamma-tubulin complex protein 4 (GCP4) (From Topology)T: gamma-tubulin complex protein 4 (GCP4)F: Spc97_Spc98ECOD (1.6)
L [auth K]Spc97_Spc98e7qj6K1 A: alpha complex topologyX: gamma-tubulin complex protein 4 (GCP4) (From Topology)H: gamma-tubulin complex protein 4 (GCP4) (From Topology)T: gamma-tubulin complex protein 4 (GCP4)F: Spc97_Spc98ECOD (1.6)
QTubulin_Ce7qj6Q2 A: a+b three layersX: Bacillus chorismate mutase-likeH: Tubulin C-terminal domain-like (From Topology)T: Tubulin C-terminal domain-likeF: Tubulin_CECOD (1.6)
QTubuline7qj6Q1 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Tubulin nucleotide-binding domain-likeF: TubulinECOD (1.6)
RTubulin_Ce7qj6R2 A: a+b three layersX: Bacillus chorismate mutase-likeH: Tubulin C-terminal domain-like (From Topology)T: Tubulin C-terminal domain-likeF: Tubulin_CECOD (1.6)
RTubuline7qj6R1 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Tubulin nucleotide-binding domain-likeF: TubulinECOD (1.6)
STubulin_Ce7qj6S2 A: a+b three layersX: Bacillus chorismate mutase-likeH: Tubulin C-terminal domain-like (From Topology)T: Tubulin C-terminal domain-likeF: Tubulin_CECOD (1.6)
STubuline7qj6S1 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Tubulin nucleotide-binding domain-likeF: TubulinECOD (1.6)
TTubulin_Ce7qj6T2 A: a+b three layersX: Bacillus chorismate mutase-likeH: Tubulin C-terminal domain-like (From Topology)T: Tubulin C-terminal domain-likeF: Tubulin_CECOD (1.6)
TTubuline7qj6T1 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Tubulin nucleotide-binding domain-likeF: TubulinECOD (1.6)
UTubulin_Ce7qj6U2 A: a+b three layersX: Bacillus chorismate mutase-likeH: Tubulin C-terminal domain-like (From Topology)T: Tubulin C-terminal domain-likeF: Tubulin_CECOD (1.6)
UTubuline7qj6U1 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Tubulin nucleotide-binding domain-likeF: TubulinECOD (1.6)
VTubulin_Ce7qj6V2 A: a+b three layersX: Bacillus chorismate mutase-likeH: Tubulin C-terminal domain-like (From Topology)T: Tubulin C-terminal domain-likeF: Tubulin_CECOD (1.6)
VTubuline7qj6V1 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Tubulin nucleotide-binding domain-likeF: TubulinECOD (1.6)
WTubulin_Ce7qj6W2 A: a+b three layersX: Bacillus chorismate mutase-likeH: Tubulin C-terminal domain-like (From Topology)T: Tubulin C-terminal domain-likeF: Tubulin_CECOD (1.6)
WTubuline7qj6W1 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Tubulin nucleotide-binding domain-likeF: TubulinECOD (1.6)
XTubulin_Ce7qj6X1 A: a+b three layersX: Bacillus chorismate mutase-likeH: Tubulin C-terminal domain-like (From Topology)T: Tubulin C-terminal domain-likeF: Tubulin_CECOD (1.6)
XTubuline7qj6X2 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Tubulin nucleotide-binding domain-likeF: TubulinECOD (1.6)
YTubulin_Ce7qj6Y1 A: a+b three layersX: Bacillus chorismate mutase-likeH: Tubulin C-terminal domain-like (From Topology)T: Tubulin C-terminal domain-likeF: Tubulin_CECOD (1.6)
YTubuline7qj6Y2 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Tubulin nucleotide-binding domain-likeF: TubulinECOD (1.6)
ZTubulin_Ce7qj6Z2 A: a+b three layersX: Bacillus chorismate mutase-likeH: Tubulin C-terminal domain-like (From Topology)T: Tubulin C-terminal domain-likeF: Tubulin_CECOD (1.6)
ZTubuline7qj6Z1 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Tubulin nucleotide-binding domain-likeF: TubulinECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF17681Gamma tubulin complex component N-terminal (GCP_N_terminal)Gamma tubulin complex component N-terminalThis is the N-terminal domain found in components of the gamma-tubulin complex proteins (GCPs). Family members include spindle pole body (SBP) components such as Spc97 and Spc98 which function as the microtubule-organizing center in yeast [1]. Furthe ...Domain
PF12554Mitotic-spindle organizing gamma-tubulin ring associated (MOZART1)Mitotic-spindle organizing gamma-tubulin ring associated- Family
PF04130Gamma tubulin complex component C-terminal (GCP_C_terminal)Gamma tubulin complex component C-terminalThis is the C-terminal domain found in components of the gamma-tubulin complex proteins (GCPs). Family members include spindle pole body (SBP) components such as Spc97 and Spc98 which function as the microtubule-organizing center in yeast [1]. Furthe ...Domain
D [auth C],
F [auth E],
H [auth G]
PF17681Gamma tubulin complex component N-terminal (GCP_N_terminal)Gamma tubulin complex component N-terminalThis is the N-terminal domain found in components of the gamma-tubulin complex proteins (GCPs). Family members include spindle pole body (SBP) components such as Spc97 and Spc98 which function as the microtubule-organizing center in yeast [1]. Furthe ...Domain
D [auth C],
F [auth E],
H [auth G]
PF04130Gamma tubulin complex component C-terminal (GCP_C_terminal)Gamma tubulin complex component C-terminalThis is the C-terminal domain found in components of the gamma-tubulin complex proteins (GCPs). Family members include spindle pole body (SBP) components such as Spc97 and Spc98 which function as the microtubule-organizing center in yeast [1]. Furthe ...Domain
D [auth C],
F [auth E],
H [auth G]
PF00022Actin (Actin)Actin- Family
J [auth I],
L [auth K]
PF17681Gamma tubulin complex component N-terminal (GCP_N_terminal)Gamma tubulin complex component N-terminalThis is the N-terminal domain found in components of the gamma-tubulin complex proteins (GCPs). Family members include spindle pole body (SBP) components such as Spc97 and Spc98 which function as the microtubule-organizing center in yeast [1]. Furthe ...Domain
J [auth I],
L [auth K]
PF12554Mitotic-spindle organizing gamma-tubulin ring associated (MOZART1)Mitotic-spindle organizing gamma-tubulin ring associated- Family
J [auth I],
L [auth K]
PF04130Gamma tubulin complex component C-terminal (GCP_C_terminal)Gamma tubulin complex component C-terminalThis is the C-terminal domain found in components of the gamma-tubulin complex proteins (GCPs). Family members include spindle pole body (SBP) components such as Spc97 and Spc98 which function as the microtubule-organizing center in yeast [1]. Furthe ...Domain
EA [auth l],
K [auth J]
PF17681Gamma tubulin complex component N-terminal (GCP_N_terminal)Gamma tubulin complex component N-terminalThis is the N-terminal domain found in components of the gamma-tubulin complex proteins (GCPs). Family members include spindle pole body (SBP) components such as Spc97 and Spc98 which function as the microtubule-organizing center in yeast [1]. Furthe ...Domain
EA [auth l],
K [auth J]
PF04130Gamma tubulin complex component C-terminal (GCP_C_terminal)Gamma tubulin complex component C-terminalThis is the C-terminal domain found in components of the gamma-tubulin complex proteins (GCPs). Family members include spindle pole body (SBP) components such as Spc97 and Spc98 which function as the microtubule-organizing center in yeast [1]. Furthe ...Domain
BA [auth c],
M [auth L]
PF17681Gamma tubulin complex component N-terminal (GCP_N_terminal)Gamma tubulin complex component N-terminalThis is the N-terminal domain found in components of the gamma-tubulin complex proteins (GCPs). Family members include spindle pole body (SBP) components such as Spc97 and Spc98 which function as the microtubule-organizing center in yeast [1]. Furthe ...Domain
BA [auth c],
M [auth L]
PF04130Gamma tubulin complex component C-terminal (GCP_C_terminal)Gamma tubulin complex component C-terminalThis is the C-terminal domain found in components of the gamma-tubulin complex proteins (GCPs). Family members include spindle pole body (SBP) components such as Spc97 and Spc98 which function as the microtubule-organizing center in yeast [1]. Furthe ...Domain
Q, R, S, T, U
PF00091Tubulin/FtsZ family, GTPase domain (Tubulin)Tubulin/FtsZ family, GTPase domainThis family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ...Domain
Q, R, S, T, U
PF03953Tubulin C-terminal domain (Tubulin_C)Tubulin C-terminal domainThis family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tub ...Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth e]actin, cytoplasmic 1
AA [auth d],
B [auth b],
N [auth k],
O [auth m],
P [auth i]
Mitotic-spindle organizing protein 1-
Gamma-tubulin complex component 3
D [auth C],
F [auth E],
H [auth G]
Gamma-tubulin complex component 2
J [auth I],
L [auth K]
Gamma-tubulin complex component 4
EA [auth l],
K [auth J]
Gamma-tubulin complex component 5
BA [auth c],
M [auth L]
Gamma-tubulin complex component 6
Q, R, S, T, U
Tubulin gamma-1 chain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth e]IPR020902Actin/actin-like conserved siteConserved Site
A [auth e]IPR004001Actin, conserved siteConserved Site
A [auth e]IPR043129ATPase, nucleotide binding domainHomologous Superfamily
A [auth e]IPR004000Actin familyFamily
AA [auth d],
B [auth b],
N [auth k],
O [auth m],
P [auth i]
IPR022214Mitotic-spindle organizing protein 1Family
IPR040457Gamma tubulin complex component, C-terminalDomain
IPR042241Gamma-tubulin complex component, C-terminal domain superfamilyHomologous Superfamily
IPR007259Gamma-tubulin complex component proteinFamily
IPR041470Gamma tubulin complex component protein, N-terminalDomain
D [auth C],
F [auth E],
H [auth G]
IPR040457Gamma tubulin complex component, C-terminalDomain
D [auth C],
F [auth E],
H [auth G]
IPR042241Gamma-tubulin complex component, C-terminal domain superfamilyHomologous Superfamily
D [auth C],
F [auth E],
H [auth G]
IPR007259Gamma-tubulin complex component proteinFamily
D [auth C],
F [auth E],
H [auth G]
IPR041470Gamma tubulin complex component protein, N-terminalDomain
J [auth I],
L [auth K]
IPR040457Gamma tubulin complex component, C-terminalDomain
J [auth I],
L [auth K]
IPR042241Gamma-tubulin complex component, C-terminal domain superfamilyHomologous Superfamily
J [auth I],
L [auth K]
IPR007259Gamma-tubulin complex component proteinFamily
J [auth I],
L [auth K]
IPR041470Gamma tubulin complex component protein, N-terminalDomain
EA [auth l],
K [auth J]
IPR040457Gamma tubulin complex component, C-terminalDomain
EA [auth l],
K [auth J]
IPR042241Gamma-tubulin complex component, C-terminal domain superfamilyHomologous Superfamily
EA [auth l],
K [auth J]
IPR007259Gamma-tubulin complex component proteinFamily
EA [auth l],
K [auth J]
IPR041470Gamma tubulin complex component protein, N-terminalDomain
BA [auth c],
M [auth L]
IPR040457Gamma tubulin complex component, C-terminalDomain
BA [auth c],
M [auth L]
IPR045818Gamma-tubulin complex component 6, N-terminalDomain
BA [auth c],
M [auth L]
IPR042241Gamma-tubulin complex component, C-terminal domain superfamilyHomologous Superfamily
BA [auth c],
M [auth L]
IPR007259Gamma-tubulin complex component proteinFamily
BA [auth c],
M [auth L]
IPR041470Gamma tubulin complex component protein, N-terminalDomain
Q, R, S, T, U
IPR008280Tubulin/FtsZ, C-terminalHomologous Superfamily
Q, R, S, T, U
IPR002454Gamma tubulinFamily
Q, R, S, T, U
IPR017975Tubulin, conserved siteConserved Site
Q, R, S, T, U
IPR023123Tubulin, C-terminalHomologous Superfamily
Q, R, S, T, U
IPR018316Tubulin/FtsZ, 2-layer sandwich domainDomain
Q, R, S, T, U
IPR003008Tubulin/FtsZ, GTPase domainDomain
Q, R, S, T, U
IPR037103Tubulin/FtsZ-like, C-terminal domainHomologous Superfamily
Q, R, S, T, U
IPR000217TubulinFamily
Q, R, S, T, U
IPR036525Tubulin/FtsZ, GTPase domain superfamilyHomologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A [auth e]PharosP60709
AA [auth d],
B [auth b],
N [auth k],
O [auth m],
P [auth i]
PharosQ08AG7
PharosQ96CW5
D [auth C],
F [auth E],
H [auth G]
PharosQ9BSJ2
J [auth I],
L [auth K]
PharosQ9UGJ1
EA [auth l],
K [auth J]
PharosQ96RT8
BA [auth c],
M [auth L]
PharosQ96RT7
Q, R, S, T, U
PharosP23258