CryoEM structure of human GARP-lTGFbeta1 in complex with a Fab fragment derived from an activating antibody.
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | pro-TGF beta-like | 8089966 | 3002405 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Cystine-knot cytokines | 8038779 | 3000846 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | pro-TGF beta-like | 8089966 | 3002405 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Cystine-knot cytokines | 8038779 | 3000846 | SCOP2B (2022-06-29) |
SAbDab Antibody Annotation SAbDab Database Homepage
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|---|---|---|---|---|
Heavy Chain | IGHV3 | - | transforming growth factor beta-1 | SAbDab (2025-04-18) | |
Light Chain | IGLV8 | Lambda | transforming growth factor beta-1 | SAbDab (2025-04-18) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00688 | TGF-beta propeptide (TGFb_propeptide) | TGF-beta propeptide | - | Family | |
PF00019 | Transforming growth factor beta like domain (TGF_beta) | Transforming growth factor beta like domain | Domain | ||
PF13855 | Leucine rich repeat (LRR_8) | Leucine rich repeat | - | Repeat | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR003939 | Transforming growth factor beta-1 proprotein | Family | |
IPR029034 | Cystine-knot cytokine | Homologous Superfamily | |
IPR001839 | Transforming growth factor-beta, C-terminal | Domain | |
IPR016319 | Transforming growth factor-beta | Family | |
IPR015615 | Transforming growth factor-beta-related | Family | |
IPR017948 | Transforming growth factor beta, conserved site | Conserved Site | |
IPR001111 | TGF-beta, propeptide | Domain | |
IPR000372 | Leucine-rich repeat N-terminal domain | Domain | |
IPR001611 | Leucine-rich repeat | Repeat | |
IPR003591 | Leucine-rich repeat, typical subtype | Repeat | |
IPR032675 | Leucine-rich repeat domain superfamily | Homologous Superfamily |