8VRK | pdb_00008vrk

Rigid body fitted model for refined density map of gamma tubulin ring complex capped microtubule


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
Q [auth I]SCOP2B SuperfamilyGCP component repeat-like 8090499 3002440 SCOP2B (2022-06-29)
Q [auth I]SCOP2B SuperfamilyGCP component repeat-like 8090497 3002440 SCOP2B (2022-06-29)
S [auth K]SCOP2B SuperfamilyGCP component repeat-like 8090499 3002440 SCOP2B (2022-06-29)
S [auth K]SCOP2B SuperfamilyGCP component repeat-like 8090497 3002440 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00091Tubulin/FtsZ family, GTPase domain (Tubulin)Tubulin/FtsZ family, GTPase domainThis family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ...Domain
PF03953Tubulin C-terminal domain (Tubulin_C)Tubulin C-terminal domainThis family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tub ...Domain
PF00091Tubulin/FtsZ family, GTPase domain (Tubulin)Tubulin/FtsZ family, GTPase domainThis family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ...Domain
PF03953Tubulin C-terminal domain (Tubulin_C)Tubulin C-terminal domainThis family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tub ...Domain
C [auth 3],
E [auth 6],
T [auth L]
PF17681Gamma tubulin complex component N-terminal (GCP_N_terminal)Gamma tubulin complex component N-terminalThis is the N-terminal domain found in components of the gamma-tubulin complex proteins (GCPs). Family members include spindle pole body (SBP) components such as Spc97 and Spc98 which function as the microtubule-organizing center in yeast [1]. Furthe ...Domain
C [auth 3],
E [auth 6],
T [auth L]
PF00091Tubulin/FtsZ family, GTPase domain (Tubulin)Tubulin/FtsZ family, GTPase domainThis family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ...Domain
C [auth 3],
E [auth 6],
T [auth L]
PF04130Gamma tubulin complex component C-terminal (GCP_C_terminal)Gamma tubulin complex component C-terminalThis is the C-terminal domain found in components of the gamma-tubulin complex proteins (GCPs). Family members include spindle pole body (SBP) components such as Spc97 and Spc98 which function as the microtubule-organizing center in yeast [1]. Furthe ...Domain
PF17681Gamma tubulin complex component N-terminal (GCP_N_terminal)Gamma tubulin complex component N-terminalThis is the N-terminal domain found in components of the gamma-tubulin complex proteins (GCPs). Family members include spindle pole body (SBP) components such as Spc97 and Spc98 which function as the microtubule-organizing center in yeast [1]. Furthe ...Domain
PF00091Tubulin/FtsZ family, GTPase domain (Tubulin)Tubulin/FtsZ family, GTPase domainThis family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ...Domain
PF04130Gamma tubulin complex component C-terminal (GCP_C_terminal)Gamma tubulin complex component C-terminalThis is the C-terminal domain found in components of the gamma-tubulin complex proteins (GCPs). Family members include spindle pole body (SBP) components such as Spc97 and Spc98 which function as the microtubule-organizing center in yeast [1]. Furthe ...Domain
F [auth 7],
G [auth 8]
PF12554Mitotic-spindle organizing gamma-tubulin ring associated (MOZART1)Mitotic-spindle organizing gamma-tubulin ring associated- Family
I [auth A],
K [auth C],
M [auth E],
O [auth G],
U [auth M]
PF17681Gamma tubulin complex component N-terminal (GCP_N_terminal)Gamma tubulin complex component N-terminalThis is the N-terminal domain found in components of the gamma-tubulin complex proteins (GCPs). Family members include spindle pole body (SBP) components such as Spc97 and Spc98 which function as the microtubule-organizing center in yeast [1]. Furthe ...Domain
I [auth A],
K [auth C],
M [auth E],
O [auth G],
U [auth M]
PF00091Tubulin/FtsZ family, GTPase domain (Tubulin)Tubulin/FtsZ family, GTPase domainThis family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ...Domain
I [auth A],
K [auth C],
M [auth E],
O [auth G],
U [auth M]
PF04130Gamma tubulin complex component C-terminal (GCP_C_terminal)Gamma tubulin complex component C-terminalThis is the C-terminal domain found in components of the gamma-tubulin complex proteins (GCPs). Family members include spindle pole body (SBP) components such as Spc97 and Spc98 which function as the microtubule-organizing center in yeast [1]. Furthe ...Domain
R [auth J]PF17681Gamma tubulin complex component N-terminal (GCP_N_terminal)Gamma tubulin complex component N-terminalThis is the N-terminal domain found in components of the gamma-tubulin complex proteins (GCPs). Family members include spindle pole body (SBP) components such as Spc97 and Spc98 which function as the microtubule-organizing center in yeast [1]. Furthe ...Domain
R [auth J]PF00091Tubulin/FtsZ family, GTPase domain (Tubulin)Tubulin/FtsZ family, GTPase domainThis family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ...Domain
R [auth J]PF04130Gamma tubulin complex component C-terminal (GCP_C_terminal)Gamma tubulin complex component C-terminalThis is the C-terminal domain found in components of the gamma-tubulin complex proteins (GCPs). Family members include spindle pole body (SBP) components such as Spc97 and Spc98 which function as the microtubule-organizing center in yeast [1]. Furthe ...Domain
Q [auth I],
S [auth K]
PF17681Gamma tubulin complex component N-terminal (GCP_N_terminal)Gamma tubulin complex component N-terminalThis is the N-terminal domain found in components of the gamma-tubulin complex proteins (GCPs). Family members include spindle pole body (SBP) components such as Spc97 and Spc98 which function as the microtubule-organizing center in yeast [1]. Furthe ...Domain
Q [auth I],
S [auth K]
PF00091Tubulin/FtsZ family, GTPase domain (Tubulin)Tubulin/FtsZ family, GTPase domainThis family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ...Domain
Q [auth I],
S [auth K]
PF04130Gamma tubulin complex component C-terminal (GCP_C_terminal)Gamma tubulin complex component C-terminalThis is the C-terminal domain found in components of the gamma-tubulin complex proteins (GCPs). Family members include spindle pole body (SBP) components such as Spc97 and Spc98 which function as the microtubule-organizing center in yeast [1]. Furthe ...Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Tubulin alpha-1B chain
Tubulin beta-3 chain
C [auth 3],
E [auth 6],
T [auth L]
TUBGCP6 protein
Gamma-tubulin complex component 3
F [auth 7],
G [auth 8]
Mitotic-spindle organizing protein 1-
H [auth 9]Actin, cytoplasmic 1
I [auth A],
K [auth C],
M [auth E],
O [auth G],
U [auth M]
Isoform 3 of Gamma-tubulin complex component 2
R [auth J]Gamma-tubulin complex component 5
Tubulin gamma-1 chain
Q [auth I],
S [auth K]
Isoform 2 of Gamma-tubulin complex component 4

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR008280Tubulin/FtsZ, C-terminalHomologous Superfamily
IPR017975Tubulin, conserved siteConserved Site
IPR023123Tubulin, C-terminalHomologous Superfamily
IPR018316Tubulin/FtsZ, 2-layer sandwich domainDomain
IPR003008Tubulin/FtsZ, GTPase domainDomain
IPR037103Tubulin/FtsZ-like, C-terminal domainHomologous Superfamily
IPR002452Alpha tubulinFamily
IPR000217TubulinFamily
IPR036525Tubulin/FtsZ, GTPase domain superfamilyHomologous Superfamily
IPR008280Tubulin/FtsZ, C-terminalHomologous Superfamily
IPR017975Tubulin, conserved siteConserved Site
IPR023123Tubulin, C-terminalHomologous Superfamily
IPR002453Beta tubulinFamily
IPR013838Beta tubulin, autoregulation binding siteBinding Site
IPR018316Tubulin/FtsZ, 2-layer sandwich domainDomain
IPR003008Tubulin/FtsZ, GTPase domainDomain
IPR037103Tubulin/FtsZ-like, C-terminal domainHomologous Superfamily
IPR000217TubulinFamily
IPR036525Tubulin/FtsZ, GTPase domain superfamilyHomologous Superfamily
C [auth 3],
E [auth 6],
T [auth L]
IPR040457Gamma tubulin complex component, C-terminalDomain
C [auth 3],
E [auth 6],
T [auth L]
IPR045818Gamma-tubulin complex component 6, N-terminalDomain
C [auth 3],
E [auth 6],
T [auth L]
IPR042241Gamma-tubulin complex component, C-terminal domain superfamilyHomologous Superfamily
C [auth 3],
E [auth 6],
T [auth L]
IPR007259Gamma-tubulin complex component proteinFamily
C [auth 3],
E [auth 6],
T [auth L]
IPR041470Gamma tubulin complex component protein, N-terminalDomain
IPR040457Gamma tubulin complex component, C-terminalDomain
IPR042241Gamma-tubulin complex component, C-terminal domain superfamilyHomologous Superfamily
IPR007259Gamma-tubulin complex component proteinFamily
IPR041470Gamma tubulin complex component protein, N-terminalDomain
F [auth 7],
G [auth 8]
IPR022214Mitotic-spindle organizing protein 1Family
H [auth 9]IPR020902Actin/actin-like conserved siteConserved Site
H [auth 9]IPR004001Actin, conserved siteConserved Site
H [auth 9]IPR043129ATPase, nucleotide binding domainHomologous Superfamily
H [auth 9]IPR004000Actin familyFamily
I [auth A],
K [auth C],
M [auth E],
O [auth G],
U [auth M]
IPR040457Gamma tubulin complex component, C-terminalDomain
I [auth A],
K [auth C],
M [auth E],
O [auth G],
U [auth M]
IPR042241Gamma-tubulin complex component, C-terminal domain superfamilyHomologous Superfamily
I [auth A],
K [auth C],
M [auth E],
O [auth G],
U [auth M]
IPR007259Gamma-tubulin complex component proteinFamily
I [auth A],
K [auth C],
M [auth E],
O [auth G],
U [auth M]
IPR041470Gamma tubulin complex component protein, N-terminalDomain
R [auth J]IPR040457Gamma tubulin complex component, C-terminalDomain
R [auth J]IPR042241Gamma-tubulin complex component, C-terminal domain superfamilyHomologous Superfamily
R [auth J]IPR007259Gamma-tubulin complex component proteinFamily
R [auth J]IPR041470Gamma tubulin complex component protein, N-terminalDomain
IPR008280Tubulin/FtsZ, C-terminalHomologous Superfamily
IPR002454Gamma tubulinFamily
IPR017975Tubulin, conserved siteConserved Site
IPR023123Tubulin, C-terminalHomologous Superfamily
IPR018316Tubulin/FtsZ, 2-layer sandwich domainDomain
IPR003008Tubulin/FtsZ, GTPase domainDomain
IPR037103Tubulin/FtsZ-like, C-terminal domainHomologous Superfamily
IPR000217TubulinFamily
IPR036525Tubulin/FtsZ, GTPase domain superfamilyHomologous Superfamily
Q [auth I],
S [auth K]
IPR040457Gamma tubulin complex component, C-terminalDomain
Q [auth I],
S [auth K]
IPR042241Gamma-tubulin complex component, C-terminal domain superfamilyHomologous Superfamily
Q [auth I],
S [auth K]
IPR007259Gamma-tubulin complex component proteinFamily
Q [auth I],
S [auth K]
IPR041470Gamma tubulin complex component protein, N-terminalDomain

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
PharosP68363
PharosQ13509
C [auth 3],
E [auth 6],
T [auth L]
PharosQ96RT7
PharosQ96CW5
F [auth 7],
G [auth 8]
PharosQ08AG7
H [auth 9]PharosP60709
I [auth A],
K [auth C],
M [auth E],
O [auth G],
U [auth M]
PharosQ9BSJ2
R [auth J]PharosQ96RT8
PharosP23258
Q [auth I],
S [auth K]
PharosQ9UGJ1