SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 15N-TMEM14C, 20 mM MES-BisTris, 2 % LMPG, 0.5 mM DSS | 95% H2O/5% D2O | 40 | 6.0 | ambient | 310 | |
2 | 3D HNCO | 13C,15N-TMEM14C, 20 mM MES-BisTris, 2 % LMPG, 0.5 mM DSS | 95% H2O/5% D2O | 40 | 6.0 | ambient | 310 | |
3 | 3D HNCA | 13C,15N-TMEM14C, 20 mM MES-BisTris, 2 % LMPG, 0.5 mM DSS | 95% H2O/5% D2O | 40 | 6.0 | ambient | 310 | |
4 | 3D HNCACB | 13C,15N-TMEM14C, 20 mM MES-BisTris, 2 % LMPG, 0.5 mM DSS | 95% H2O/5% D2O | 40 | 6.0 | ambient | 310 | |
5 | 3D HN(CO)CA | 13C,15N-TMEM14C, 20 mM MES-BisTris, 2 % LMPG, 0.5 mM DSS | 95% H2O/5% D2O | 40 | 6.0 | ambient | 310 | |
6 | 3D 1H-15N NOESY | 15N-TMEM14C, 20 mM MES-BisTris, 2 % LMPG, 0.5 mM DSS | 95% H2O/5% D2O | 40 | 6.0 | ambient | 310 | |
7 | 3D 13C-15N HSQC-NOESY-HSQC | 13C,15N-TMEM14C, 20 mM MES-BisTris, 2 % LMPG, 0.5 mM DSS | 95% H2O/5% D2O | 40 | 6.0 | ambient | 310 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DRX | 700 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
torsion angle dynamics | TopSpin |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | target function |
Conformers Calculated Total Number | 200 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (fewest violations) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | collection | TopSpin | Bruker Biospin | |
2 | processing | TopSpin | Bruker Biospin | |
3 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
4 | chemical shift assignment | Sparky | Goddard | |
5 | chemical shift assignment | CARA | Keller and Wuthrich | |
6 | data analysis | CARA | Keller and Wuthrich | |
7 | structure solution | CYANA | Guntert, Mumenthaler and Wuthrich | |
8 | structure visualization | MOLMOL | Koradi, Billeter and Wuthrich | |
9 | structure analysis | MOLMOL | Koradi, Billeter and Wuthrich | |
10 | refinement | CYANA | Guntert, Mumenthaler and Wuthrich |