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Explore in 3D: Sequence Alignments
1PIV_2 - Summary | Structure
Name: Genome polyprotein
Organism: Poliovirus type 3 (strains P3/LEON/37 AND P3/LEON 12A[1]B)
Experimental Method: X-ray
Resolution: 2.9 Å
Molecular Weight: 33.652 kDa

Genome polyprotein

UniProtKB accession:  P03302
Grouped By:  Matching UniProtKB accession
Group Content:  
Polymer Entities matching query 39
Go to UniProtKB:  P03302
UniProtKB description:  Forms an icosahedral capsid of pseudo T=3 symmetry with capsid proteins VP2 and VP3 (By similarity). The capsid is 300 Angstroms in diameter, composed of 60 copies of each capsid protein and enclosing the viral positive strand RNA genome (By similarity). Capsid protein VP1 mainly forms the vertices of the capsid (By similarity). Capsid protein VP1 interacts with host cell receptor PVR to provide virion attachment to target host cells (By similarity). This attachment induces virion internalization predominantly through clathrin- and caveolin-independent endocytosis in Hela cells and through caveolin-mediated endocytosis in brain microvascular endothelial cells (By similarity). Tyrosine kinases are probably involved in the entry process (By similarity). Virus binding to PVR induces increased junctional permeability and rearrangement of junctional proteins (By similarity). Modulation of endothelial tight junctions, as well as cytolytic infection of endothelial cells themselves, may result in loss of endothelial integrity which may help the virus to reach the CNS (By similarity). After binding to its receptor, the capsid undergoes conformational changes (By similarity). Capsid protein VP1 N-terminus (that contains an amphipathic alpha-helix) and capsid protein VP4 are externalized (By similarity). Together, they shape a pore in the host membrane through which viral genome is translocated to host cell cytoplasm (By similarity).
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Structure Features
Determination Methodology


Sequence Features
Number of Source Taxonomies


Experimental Features
Experimental Method
Resolution


Organisms
Organism
Taxonomy


Protein Domains
SCOP/SCOPe Domain
CATH Domain
ECOD Domain
PFAM Domain
InterPro Domain
[ 9+ ]


Function
Enzyme Classification
GO Molecular Function
GO Biological Process
[ 4+ ]
GO Cellular Component