Ligand validation:3WLX


PLG: N-GLYCINE-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YL-METHANE]

PLG is a Ligand Of Interest in 3WLX designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3WLX_PLG_B_401Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3WLX_PLG_B_401Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3WLX_PLG_B_401Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
3WLX_PLG_B_401 58% 8% 0.165 0.9432.58 2.03 3 400100%1
3WLX_PLG_A_401 51% 8% 0.172 0.9252.61 1.98 3 410100%1
4LNL_PLG_B_403 72% 1% 0.125 0.9484.36 3.79 8 1220100%1
4LNM_PLG_A_401 35% 1% 0.17 0.8594.42 3.45 7 1040100%0.7
8AQL_PLG_C_601 99% 23% 0.054 0.9891.28 1.9 3 700100%1
8DSK_PLG_B_902 95% 29% 0.069 0.9731.24 1.57 1 610100%1
8TQF_PLG_A_501 90% 25% 0.095 0.9771.44 1.61 3 610100%1
8H20_PLG_A_401 89% 16% 0.091 0.971.66 2.01 3 500100%1
1EJI_PLG_A_500 89% 1% 0.082 0.9594.99 3.42 14 1210100%1