GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 4M8N designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 4M8N_GDP_F_201 | 31% | 42% | 0.237 | 0.907 | 0.94 | 1.31 | 1 | 4 | 3 | 0 | 100% | 1 |
| 4M8N_GDP_E_201 | 29% | 43% | 0.23 | 0.891 | 0.94 | 1.27 | 1 | 5 | 0 | 0 | 100% | 1 |
| 4M8N_GDP_H_201 | 29% | 42% | 0.247 | 0.906 | 0.93 | 1.33 | 1 | 5 | 5 | 0 | 100% | 1 |
| 4M8N_GDP_G_201 | 28% | 42% | 0.209 | 0.864 | 0.94 | 1.29 | 1 | 4 | 2 | 0 | 100% | 1 |
| 3X1W_GDP_A_201 | 100% | 19% | 0.042 | 0.989 | 2.13 | 1.37 | 8 | 3 | 0 | 0 | 100% | 1 |
| 3KUC_GDP_A_170 | 97% | 37% | 0.071 | 0.983 | 1.15 | 1.3 | 2 | 4 | 0 | 0 | 100% | 1 |
| 3BRW_GDP_D_171 | 58% | 41% | 0.2 | 0.98 | 0.89 | 1.37 | - | 7 | 2 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 23% | 0.012 | 0.999 | 2.28 | 0.95 | 3 | 2 | 8 | 0 | 100% | 1 |
| 8QEG_GDP_A_401 | 100% | 51% | 0.031 | 0.993 | 1.02 | 0.87 | 3 | 1 | 0 | 0 | 100% | 1 |
| 8QEH_GDP_A_405 | 100% | 55% | 0.03 | 0.993 | 0.89 | 0.85 | 1 | 1 | 0 | 0 | 100% | 1 |
| 1RRG_GDP_A_183 | 100% | 17% | 0.036 | 0.997 | 2.05 | 1.56 | 7 | 3 | 0 | 0 | 100% | 1 |
| 2CXX_GDP_B_2401 | 100% | 29% | 0.031 | 0.989 | 1.26 | 1.57 | 1 | 3 | 0 | 0 | 100% | 1 |
