Ligand validation:5CKV


TYR: TYROSINE

TYR is a Ligand Of Interest in 5CKV designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5CKV_TYR_B_508Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5CKV_TYR_B_508Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5CKV_TYR_B_508Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5CKV_TYR_B_508 55% 57% 0.188 0.9580.7 0.96 - 200100%1
2YPP_TYR_A_800 92% 50% 0.082 0.9711.04 0.89 1 -00100%1
2YPQ_TYR_A_1465 54% 47% 0.182 0.9470.87 1.17 1 200100%1
5CKX_TYR_B_509 50% 56% 0.203 0.9530.73 0.96 1 200100%1
6HNI_TYR_A_401 96% 37% 0.072 0.9811.24 1.25 2 210100%1
7KQR_TYR_A_402 95% 63% 0.074 0.9760.73 0.7 1 100100%1
6PZ0_TYR_B_302 93% 58% 0.08 0.9760.74 0.88 - 100100%1
3JW7_TYR_A_356 92% 66% 0.079 0.9690.8 0.52 - -00100%1
8ZVG_TYR_A_302 92% 61% 0.062 0.9510.51 0.98 - 130100%1