Ligand validation:5M4F


GOL: GLYCEROL



Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5M4F_GOL_A_404Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5M4F_GOL_A_404Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5M4F_GOL_A_404Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5M4F_GOL_A_404 47% 58% 0.143 0.8830.25 1.33 - 110100%1
5M4F_GOL_A_403 17% 53% 0.248 0.8250.38 1.41 - -20100%1
5M4F_GOL_A_402 8% 72% 0.236 0.7070.39 0.68 - -20100%1
8C5Q_GOL_A_410 70% 35% 0.123 0.9411.31 1.27 1 110100%1
3JUH_GOL_A_340 67% 24% 0.1 0.9061.35 1.76 - 330100%1
5N9N_GOL_A_407 64% 89% 0.128 0.9270.37 0.28 - -10100%1
4IB5_GOL_A_403 40% 88% 0.169 0.8780.36 0.3 - -00100%1
3NSZ_GOL_A_700 10% 37% 0.276 0.7820.93 1.54 - 190100%0.62
2YOQ_GOL_A_1196 100% 35% 0.024 0.9960.38 2.12 - 200100%1
4KFD_GOL_D_806 100% 57% 0.024 0.9950.41 1.21 - -00100%1
4KFE_GOL_E_803 100% 63% 0.024 0.9950.31 1.07 - -00100%1
1M5Q_GOL_W_4006 100% 0% 0.027 0.9924.89 6.2 5 300100%1
2Y3G_GOL_A_1150 100% 85% 0.029 0.9950.36 0.39 - -00100%1